
PFRMAT AL
TARGET T0122
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1a53
D    4 P 2
G    5 R 3
S    6 Y 4
L    7 L 5
I    8 P 20
P    9 S 21
Y   10 F 22
L   11 R 23
T   12 A 24
A   13 S 25
G   14 R 26
D   15 Q 27
P   16 R 28
D   17 P 29
K   18 I 30
Q   19 I 31
S   20 S 32
T   21 L 33
L   22 N 34
N   23 E 35
F   24 R 36
L   25 I 37
L   26 L 38
A   27 E 39
L   28 F 40
D   29 N 41
E   30 R 43
Y   31 N 44
A   32 I 45
G   33 T 46
A   34 A 47
I   35 I 48
E   36 I 49
L   37 A 50
G   38 E 51
I   39 Y 52
P   40 K 53
F   41 R 54
S   42 K 55
D   43 S 56
P   44 P 57
I   45 S 58
A   46 G 59
D   47 E 63
G   48 R 64
K   49 D 65
T   50 P 66
I   51 I 67
Q   52 E 68
E   53 Y 69
S   54 K 71
H   55 F 72
Y   56 M 73
R   57 E 74
A   58 R 75
L   59 E 85
K   60 E 86
N   61 K 87
G   62 Y 88
F   63 F 89
K   64 N 90
L   65 G 91
R   66 S 92
E   67 Y 93
A   68 E 94
F   69 T 95
V   72 L 96
K   73 R 97
E   74 K 98
F   75 I 99
R   76 A 100
R   77 S 101
H   78 S 102
S   79 V 103
S   80 S 104
T   81 I 105
P   82 P 106
I   83 I 107
V   84 L 108
L   85 M 109
M   86 K 110
T   87 D 111
Y   88 F 112
Y   89 I 113
N   90 V 114
P   91 K 115
I   92 E 116
Y   93 S 117
R   94 Q 118
A   95 I 119
G   96 D 120
V   97 D 121
A  104 A 122
K  105 Y 123
A  106 N 124
S  107 L 125
G  108 G 126
V  109 A 127
D  110 D 128
G  111 T 129
I  112 V 130
L  113 L 131
V  114 L 132
V  115 K 135
D  116 I 136
L  117 L 137
P  118 T 138
V  119 E 139
F  120 R 140
H  121 E 141
A  122 L 142
K  123 E 143
E  124 S 144
F  125 L 145
T  126 L 146
E  127 E 147
I  128 Y 148
A  129 A 149
R  130 R 150
E  131 S 151
E  132 Y 152
G  133 G 153
I  134 M 154
K  135 E 155
T  136 P 156
V  137 L 157
F  138 I 158
L  139 E 159
A  140 I 160
A  141 N 161
P  145 D 162
D  146 E 163
E  147 N 164
R  148 D 165
L  149 L 166
K  150 D 167
V  151 I 168
I  152 A 169
D  153 L 170
D  154 R 171
M  155 I 172
T  156 G 173
T  157 A 174
G  158 R 175
F  159 F 176
V  160 I 177
Y  161 G 178
L  162 I 179
V  163 N 180
S  164 S 181
L  165 R 182
Y  166 D 183
G  167 L 184
T  168 E 185
T  169 T 186
G  170 L 187
E  173 E 188
E  174 I 189
I  175 N 190
P  176 K 191
K  177 E 192
T  178 N 193
A  179 Q 194
Y  180 R 195
D  181 K 196
L  182 L 197
L  183 I 198
R  184 S 199
R  185 M 200
A  186 I 201
K  187 P 202
R  188 S 203
R  191 N 204
N  192 V 205
K  193 V 206
V  194 K 207
A  195 V 208
V  196 A 209
G  197 E 210
F  198 S 211
G  199 G 212
V  200 I 213
S  201 S 214
K  202 E 215
R  203 R 216
E  204 N 217
H  205 E 218
V  206 I 219
V  207 E 220
S  208 E 221
L  209 L 222
L  210 R 223
K  211 K 224
E  212 L 225
G  213 G 226
A  214 V 227
N  215 N 228
G  216 A 229
V  217 F 230
V  218 L 231
V  219 I 232
G  220 G 233
S  221 S 234
A  222 S 235
L  223 L 236
V  224 M 237
K  225 R 238
A  234 N 239
T  235 P 240
E  236 E 241
L  238 K 242
K  239 I 243
K  240 K 244
K  241 E 245
V  242 F 246
E  243 I 247
E  244 L 248
TER
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