
PFRMAT AL
TARGET T0122
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1pii
M    1 M 1
F    2 K 20
K    3 Q 21
D    4 Q 22
G    5 Q 23
S    6 P 24
L    7 L 25
I    8 A 26
P    9 S 27
Y   10 F 28
L   11 Q 29
T   12 N 30
A   13 E 31
G   14 V 32
D   15 Q 33
P   16 P 34
D   17 S 35
K   18 T 36
Q   19 R 37
S   20 H 38
F   24 F 39
L   25 Y 40
L   26 D 41
A   27 A 42
L   28 L 43
D   29 Q 44
E   30 G 45
Y   31 A 46
A   32 R 47
G   33 T 48
A   34 A 49
I   35 F 50
E   36 I 51
L   37 L 52
G   38 E 53
I   39 C 54
P   40 K 55
F   41 K 56
S   42 A 57
D   43 S 58
P   44 P 59
I   45 I 64
A   46 R 65
D   47 D 66
G   48 D 67
K   49 F 68
T   50 D 69
I   51 P 70
Q   52 A 71
E   53 R 72
S   54 I 73
H   55 A 74
R   57 A 75
A   58 I 76
L   59 Y 77
K   60 K 78
N   61 H 79
G   62 Y 80
F   63 A 81
K   64 Y 92
L   65 F 93
R   66 Q 94
E   67 G 95
A   68 S 96
F   69 F 97
W   70 N 98
I   71 F 99
V   72 L 100
K   73 P 101
E   74 I 102
F   75 V 103
R   76 S 104
R   77 Q 105
H   78 I 106
S   79 A 107
S   80 P 108
T   81 Q 109
P   82 P 110
I   83 I 111
V   84 L 112
L   85 C 113
M   86 K 114
T   87 D 115
Y   88 F 116
Y   89 I 117
N   90 I 118
P   91 D 119
I   92 P 120
Y   93 Y 121
F  100 Q 122
L  101 I 123
A  102 Y 124
E  103 L 125
A  104 A 126
K  105 R 127
A  106 Y 128
S  107 Y 129
G  108 Q 130
V  109 A 131
D  110 D 132
G  111 A 133
I  112 C 134
L  113 L 135
V  114 L 136
V  115 M 137
D  116 L 138
L  117 S 139
P  118 V 140
V  119 L 141
F  120 D 142
H  121 Q 145
A  122 Y 146
K  123 R 147
E  124 Q 148
F  125 L 149
T  126 A 150
E  127 A 151
I  128 V 152
A  129 A 153
R  130 H 154
E  131 S 155
E  132 L 156
G  133 E 157
I  134 M 158
K  135 G 159
T  136 V 160
V  137 L 161
F  138 T 162
L  139 E 163
A  140 V 164
A  141 S 165
P  142 N 166
N  143 E 167
T  144 E 168
P  145 E 169
D  146 Q 170
E  147 E 171
R  148 R 172
L  149 A 173
D  153 I 174
D  154 A 175
M  155 L 176
T  156 G 177
T  157 A 178
G  158 K 179
F  159 V 180
V  160 V 181
Y  161 G 182
V  163 I 183
S  164 N 184
L  165 N 185
Y  166 R 186
G  167 D 187
T  168 L 188
T  169 R 189
G  170 D 190
A  171 L 191
R  172 S 192
E  173 I 193
E  174 D 194
I  175 L 195
P  176 N 196
D  181 R 197
L  182 T 198
L  183 R 199
R  184 E 200
R  185 L 201
A  186 A 202
K  187 P 203
R  188 K 204
I  189 L 205
C  190 G 206
R  191 H 207
N  192 N 208
K  193 V 209
V  194 V 211
A  195 I 212
V  196 S 213
G  197 E 214
F  198 S 215
G  199 G 216
V  200 I 217
S  201 N 218
K  202 T 219
R  203 Y 220
E  204 A 221
H  205 Q 222
V  206 V 223
V  207 R 224
L  209 E 225
L  210 L 226
K  211 S 227
E  212 H 228
G  213 F 229
A  214 A 230
N  215 N 231
G  216 G 232
V  217 F 233
V  218 L 234
V  219 I 235
G  220 G 236
S  221 S 237
A  222 A 238
L  223 L 239
V  224 M 240
K  225 A 241
G  228 H 242
E  229 D 243
K  230 D 244
G  231 L 245
R  232 H 246
E  233 A 247
A  234 A 248
T  235 V 249
E  236 R 250
F  237 R 251
L  238 V 252
K  239 L 253
K  240 L 254
TER
END

