
PFRMAT AL
TARGET T0122
AUTHOR 3995-5176-6362
METHOD Chandonia & Cohen, mostly unpublished.
METHOD Uses a combination of PSI-BLAST scoring matrix
METHOD and Pred2ary secondary structure prediction.
METHOD Pred2ary page is http://www.cmpharm.ucsf.edu/~jmc/pred2ary/
METHOD The potential is documented in the paper by
METHOD Schwartz et al which is referenced on
METHOD my research page: http://www.cmpharm.ucsf.edu/~jmc/research.html
MODEL 1
PARENT 1rpx_A
M 1 F 6
F 2 S 7
K 3 K 8
D 4 S 9
G 5 D 10
S 6 I 11
L 7 I 12
I 8 V 13
P 9 P 15
Y 10 S 16
L 11 I 17
T 12 L 18
A 13 S 19
G 14 A 20
D 15 N 21
P 16 F 22
D 17 S 23
K 18 K 24
S 20 L 25
T 21 G 26
L 22 E 27
N 23 Q 28
F 24 V 29
L 25 K 30
L 26 A 31
A 27 I 32
L 28 E 33
D 29 Q 34
E 30 A 35
Y 31 G 36
A 32 C 37
G 33 D 38
A 34 W 39
I 35 I 40
E 36 H 41
L 37 V 42
G 38 D 43
I 39 V 44
A 46 M 45
D 47 D 46
G 48 G 47
K 49 R 48
T 50 F 49
I 51 V 50
Q 52 P 51
E 53 N 52
S 54 I 53
H 55 T 54
Y 56 I 55
R 57 G 56
A 58 P 57
L 59 L 58
I 71 V 59
V 72 V 60
K 73 D 61
E 74 S 62
F 75 L 63
R 76 R 64
R 77 P 65
H 78 I 66
S 79 T 67
S 80 D 68
T 81 L 69
P 82 P 70
I 83 L 71
V 84 D 72
L 85 V 73
M 86 H 74
T 87 L 75
Y 88 M 76
Y 89 I 77
A 95 V 78
G 96 E 79
V 97 P 80
R 98 D 81
N 99 Q 82
F 100 R 83
L 101 V 84
A 102 P 85
E 103 D 86
A 104 F 87
K 105 I 88
A 106 K 89
S 107 A 90
G 108 G 91
V 109 A 92
D 110 D 93
G 111 I 94
I 112 V 95
L 113 S 96
V 114 V 97
V 115 H 98
D 116 C 99
L 117 E 100
P 118 Q 101
V 119 S 102
F 120 S 103
H 121 H 106
A 122 L 107
K 123 H 108
E 124 R 109
F 125 T 110
T 126 I 111
E 127 N 112
I 128 Q 113
A 129 I 114
R 130 K 115
E 131 S 116
E 132 L 117
G 133 G 118
I 134 A 119
K 135 K 120
T 136 A 121
V 137 G 122
F 138 V 123
L 139 V 124
A 140 L 125
A 141 N 126
P 142 P 127
N 143 G 128
T 144 T 129
P 145 P 130
D 146 L 131
E 147 T 132
R 148 A 133
L 149 I 134
K 150 E 135
V 151 Y 136
I 152 V 137
D 153 L 138
D 154 D 139
M 155 A 140
T 157 V 141
G 158 D 142
F 159 L 143
V 160 V 144
Y 161 L 145
L 162 I 146
V 163 M 147
S 164 S 148
L 165 V 149
Y 166 N 150
G 167 P 151
T 168 G 152
T 169 F 153
G 170 G 154
A 171 G 155
R 172 Q 156
E 173 S 157
E 174 F 158
I 175 I 159
P 176 E 160
K 177 S 161
T 178 Q 162
A 179 V 163
Y 180 K 164
D 181 K 165
L 182 I 166
L 183 S 167
R 184 D 168
R 185 L 169
A 186 R 170
K 187 K 171
R 188 E 175
I 189 R 176
C 190 G 177
R 191 N 179
N 192 P 180
K 193 W 181
V 194 I 182
A 195 E 183
V 196 V 184
G 197 D 185
F 198 G 186
G 199 G 187
V 200 V 188
S 201 G 189
R 203 P 190
E 204 K 191
H 205 N 192
V 206 A 193
V 207 Y 194
S 208 K 195
L 209 V 196
L 210 I 197
K 211 E 198
E 212 A 199
G 213 G 200
A 214 A 201
N 215 N 202
G 216 A 203
V 217 L 204
V 218 V 205
V 219 A 206
G 220 G 207
S 221 S 208
A 222 A 209
L 223 V 210
V 224 F 211
K 225 G 212
I 226 A 213
R 232 P 214
E 233 D 215
A 234 Y 216
T 235 A 217
E 236 E 218
F 237 A 219
L 238 I 220
K 239 K 221
K 240 G 222
K 241 I 223
V 242 K 224
E 243 T 225
E 244 S 226
L 245 K 227
L 246 R 228
G 247 P 229
I 248 E 230
TER
END

