
PFRMAT AL
TARGET T0123
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 2a2u_A
V    1 E 1
E    2 E 2
V    3 A 3
T    4 S 4
P    5 S 5
I    6 T 6
M    7 R 7
T    8 G 8
E    9 N 9
L   10 L 10
D   11 D 11
T   12 V 12
Q   13 A 13
K   14 K 14
V   15 L 15
A   16 N 16
G   17 G 17
T   18 D 18
W   19 W 19
H   20 F 20
T   21 S 21
V   22 I 22
A   23 V 23
M   24 V 24
A   25 A 25
V   26 S 26
S   27 N 27
D   28 K 28
V   29 R 29
S   30 E 30
L   31 K 31
L   32 I 32
D   33 E 33
A   34 E 34
K   35 N 35
S   37 G 36
P   38 S 37
L   39 M 38
K   40 R 39
A   41 V 40
Y   42 F 41
V   43 M 42
E   44 Q 43
G   45 H 44
L   46 I 45
K   47 D 46
P   48 V 47
T   49 L 48
E   51 E 49
G   52 N 50
D   53 S 51
L   54 L 52
E   55 G 53
I   56 F 54
L   57 K 55
L   58 F 56
Q   59 R 57
K   60 I 58
R   61 K 59
E   62 E 60
N   63 N 61
D   64 G 62
K   65 E 63
C   66 C 64
A   67 R 65
Q   68 E 66
E   69 L 67
V   70 Y 68
L   71 L 69
L   72 V 70
A   73 A 71
K   74 Y 72
K   75 K 73
T   76 T 74
D   77 P 75
I   78 E 76
P   79 D 77
A   80 G 78
V   81 E 79
F   82 Y 80
K   83 F 81
I   84 V 82
N   85 E 83
A   86 Y 84
L   87 D 85
D   88 G 86
E   89 G 87
N   90 N 88
Q   91 T 89
L   92 F 90
F   93 T 91
L   94 I 92
L   95 L 93
D   96 K 94
T   97 T 95
D   98 D 96
Y   99 Y 97
D  100 D 98
S  101 R 99
H  102 Y 100
L  103 V 101
L  104 M 102
L  105 F 103
C  106 H 104
M  107 L 105
E  108 I 106
N  109 N 107
S  110 F 108
A  111 K 109
S  112 N 110
P  113 G 111
E  114 E 112
H  115 T 113
S  116 F 114
L  117 Q 115
V  118 L 116
C  119 M 117
Q  120 V 118
S  121 L 119
L  122 Y 120
A  123 G 121
R  124 R 122
T  125 T 123
L  126 K 124
E  127 D 125
V  128 L 126
D  129 S 127
D  130 S 128
Q  131 D 129
I  132 I 130
R  133 K 131
E  134 E 132
K  135 K 133
F  136 F 134
E  137 A 135
D  138 K 136
A  139 L 137
L  140 C 138
K  141 E 139
T  142 A 140
L  143 H 141
S  144 G 142
V  145 I 143
P  146 R 145
M  147 D 146
R  148 N 147
I  149 I 148
L  150 I 149
P  151 D 150
A  152 L 151
Q  153 T 152
L  154 K 153
E  155 T 154
E  156 D 155
Q  157 R 156
C  158 C 157
R  159 L 158
TER
END

