
PFRMAT AL
TARGET T0123
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1ngl_A
V    1 L 14
E    2 S 15
V    3 K 16
T    4 V 17
P    5 P 18
I    6 L 19
M    7 Q 20
T    8 Q 21
E    9 N 22
L   10 F 23
D   11 Q 24
T   12 D 25
Q   13 N 26
K   14 Q 27
V   15 F 28
A   16 Q 29
G   17 G 30
T   18 K 31
W   19 W 32
H   20 Y 33
T   21 V 34
V   22 V 35
A   23 G 36
M   24 L 37
A   25 A 38
V   26 G 39
S   27 N 40
D   28 A 41
V   29 I 42
L   32 L 43
D   33 R 44
A   34 E 45
K   35 D 46
S   36 K 47
S   37 D 48
P   38 P 49
L   39 Q 50
K   40 K 51
A   41 M 52
Y   42 Y 53
V   43 A 54
E   44 T 55
G   45 I 56
L   46 Y 57
K   47 E 58
P   48 L 59
T   49 K 60
P   50 E 61
E   51 D 62
G   52 K 63
D   53 S 64
L   54 Y 65
E   55 N 66
I   56 V 67
L   57 T 68
L   58 S 69
Q   59 V 70
K   60 L 71
R   61 F 72
E   62 R 73
N   63 K 74
D   64 K 75
K   65 K 76
C   66 C 77
A   67 D 78
Q   68 Y 79
E   69 W 80
V   70 I 81
L   71 R 82
L   72 T 83
A   73 F 84
K   74 V 85
K   75 P 86
T   76 G 87
D   77 C 88
I   78 Q 89
P   79 P 90
A   80 G 91
V   81 E 92
F   82 F 93
K   83 T 94
I   84 L 95
N   85 S 100
A   86 Y 101
L   87 P 102
D   88 G 103
E   89 S 106
N   90 Y 107
Q   91 L 108
L   92 V 109
F   93 R 110
L   94 V 111
L   95 V 112
D   96 S 113
T   97 T 114
D   98 N 115
Y   99 Y 116
D  100 N 117
S  101 Q 118
H  102 H 119
L  103 A 120
L  104 M 121
L  105 V 122
C  106 F 123
M  107 F 124
E  108 K 125
N  109 K 126
S  110 V 127
A  111 S 128
S  112 Q 129
P  113 N 130
E  114 R 131
H  115 E 132
S  116 Y 133
L  117 F 134
V  118 K 135
C  119 I 136
Q  120 T 137
S  121 L 138
L  122 Y 139
A  123 G 140
R  124 R 141
T  125 T 142
L  126 K 143
E  127 E 144
V  128 L 145
D  129 T 146
D  130 S 147
Q  131 E 148
I  132 L 149
R  133 K 150
E  134 E 151
K  135 N 152
F  136 F 153
E  137 I 154
D  138 R 155
A  139 F 156
L  140 S 157
K  141 K 158
T  142 S 159
L  143 L 160
S  144 G 161
V  145 L 162
P  146 P 163
M  147 E 164
R  148 N 165
I  149 I 167
L  150 V 168
P  151 F 169
A  152 P 170
Q  153 V 171
L  154 P 172
E  155 I 173
E  156 D 174
Q  157 Q 175
C  158 C 176
TER
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