
PFRMAT AL
TARGET T0123
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1ew3_A
I    6 V 23
M    7 A 24
T    8 R 26
E    9 N 27
L   10 F 28
D   11 D 29
T   12 I 30
Q   13 S 31
K   14 K 32
V   15 I 33
A   16 S 34
G   17 G 35
T   18 E 36
W   19 W 37
H   20 Y 38
T   21 S 39
V   22 I 40
A   23 F 41
M   24 L 42
A   25 A 43
V   26 S 44
S   27 D 45
D   28 V 46
V   29 K 47
S   30 E 48
L   31 K 49
L   32 I 50
D   33 E 51
A   34 E 52
K   35 N 53
S   37 G 54
P   38 S 55
L   39 M 56
K   40 R 57
A   41 V 58
Y   42 F 59
V   43 V 60
E   44 D 61
G   45 V 62
L   46 I 63
K   47 R 64
P   48 A 65
T   49 L 66
P   50 D 67
E   51 N 68
G   52 S 69
D   53 S 70
L   54 L 71
E   55 Y 72
I   56 A 73
L   57 E 74
L   58 Y 75
Q   59 Q 76
K   60 T 77
R   61 K 78
E   62 V 79
N   63 N 80
D   64 G 81
K   65 E 82
C   66 C 83
A   67 T 84
Q   68 E 85
E   69 F 86
V   70 P 87
L   71 M 88
L   72 V 89
A   73 F 90
K   74 D 91
K   75 K 92
T   76 T 93
D   77 E 94
I   78 E 95
P   79 D 96
A   80 G 97
V   81 V 98
F   82 Y 99
K   83 S 100
I   84 L 101
N   85 N 102
A   86 Y 103
L   87 D 104
D   88 G 105
E   89 Y 106
N   90 N 107
Q   91 V 108
L   92 F 109
F   93 R 110
L   94 I 111
L   95 S 112
D   96 E 113
T   97 F 114
D   98 E 115
Y   99 N 116
D  100 D 117
S  101 E 118
H  102 H 119
L  103 I 120
L  104 I 121
L  105 L 122
C  106 Y 123
M  107 L 124
E  108 V 125
N  109 N 126
S  110 F 127
A  111 D 128
S  112 K 129
P  113 D 130
E  114 R 131
H  115 P 132
S  116 F 133
L  117 Q 134
V  118 L 135
C  119 F 136
Q  120 E 137
S  121 F 138
L  122 Y 139
A  123 A 140
R  124 R 141
T  125 E 142
L  126 P 143
E  127 D 144
V  128 V 145
D  129 S 146
D  130 P 147
Q  131 E 148
I  132 I 149
R  133 K 150
E  134 E 151
K  135 E 152
F  136 F 153
E  137 V 154
D  138 K 155
A  139 I 156
L  140 V 157
K  141 Q 158
T  142 K 159
L  143 R 160
S  144 G 161
V  145 I 162
P  146 K 164
M  147 E 165
R  148 N 166
I  149 I 167
L  150 I 168
P  151 D 169
A  152 L 170
Q  153 T 171
L  154 K 172
E  155 I 173
E  156 D 174
Q  157 R 175
C  158 C 176
R  159 R 180
V  160 G 181
TER
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