
PFRMAT AL
TARGET T0128
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=46.49
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: sodfe
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1sss_A
V  13     I     4
T  14     Q     5
T  15     F     6
K  16     K     7
R  17     K     8
Y  18     Y     9
T  19     E    10
L  20     L    11
P  21     P    12
P  22     P    13
L  23     L    14
P  24     P    15
Y  25     Y    16
A  26     K    17
Y  27     I    18
N  28     D    19
A  29     A    20
L  30     L    21
E  31     E    22
P  32     P    23
Y  33     Y    24
I  34     I    25
S  35     S    26
A  36     K    27
E  37     D    28
I  38     I    29
M  39     I    30
Q  40     D    31
L  41     V    32
H  42     H    33
H  43     Y    34
Q  44     N    35
K  45     G    36
H  46     H    37
H  47     H    38
Q  48     K    39
G  49     G    40
Y  50     Y    41
V  51     V    42
N  52     N    43
G  53     G    44
A  54     A    45
N  55     N    46
A  56     S    47
A  57     L    48
L  58     L    49
E  59     E    50
L  61     R    51
E  62     L    52
K  63     E    53
F  64     K    54
R  65     V    55
K  66     V    56
G  67     K    57
E  68     G    63
A  69     Q    64
I  71     Y    65
D  72     D    66
I  73     I    67
R  74     Q    68
A  75     G    69
V  76     I    70
L  77     I    71
R  78     R    72
D  79     G    73
L  80     L    74
S  81     T    75
F  82     F    76
H  83     N    77
L  84     I    78
N  85     N    79
G  86     G    80
H  87     H    81
I  88     K    82
L  89     L    83
H  90     H    84
S  91     A    85
I  92     L    86
F  93     Y    87
W  94     W    88
P  95     E    89
N  96     N    90
M  97     M    91
A  98     A    92
P  99     P    93
P 100     S    94
G 101     G    95
K 102     K    96
G 103     G    97
G 104     G    98
G 105     G    99
K 106     K   100
P 107     P   101
G 108     G   102
G 109     G   103
K 110     A   104
I 111     L   105
A 112     A   106
D 113     D   107
L 114     L   108
I 115     I   109
N 116     N   110
K 117     K   111
F 118     Q   112
F 119     Y   113
G 120     G   114
S 121     S   115
F 122     F   116
E 123     D   117
K 124     R   118
F 125     F   119
K 126     K   120
E 127     Q   121
E 128     V   122
F 129     F   123
S 130     T   124
Q 131     E   125
A 132     T   126
A 133     A   127
K 134     N   128
N 135     S   129
V 136     L   130
E 137     P   131
G 138     G   132
V 139     T   133
G 140     G   134
W 141     W   135
A 142     A   136
I 143     V   137
L 144     L   138
V 145     Y   139
Y 146     Y   140
E 147     D   141
P 148     T   142
L 149     E   143
E 150     S   144
E 151     G   145
Q 152     N   146
L 153     L   147
L 154     Q   148
I 155     I   149
L 156     M   150
Q 157     T   151
I 158     F   152
E 159     E   153
K 160     N   154
H 161     H   155
N 162     F   156
L 163     Q   157
M 164     N   158
H 165     H   159
A 166     I   160
A 167     A   161
V 171     I   165
L 172     I   166
L 173     L   167
A 174     I   168
L 175     L   169
D 176     D   170
V 177     E   171
W 178     F   172
E 179     E   173
H 180     H   174
A 181     A   175
Y 182     Y   176
Y 183     Y   177
L 184     L   178
Q 185     Q   179
Y 186     Y   180
K 187     K   181
N 188     N   182
D 189     K   183
R 190     R   184
G 191     A   185
S 192     D   186
Y 193     Y   187
V 194     V   188
D 195     N   189
N 196     A   190
W 197     W   191
W 198     W   192
N 199     N   193
V 200     V   194
V 201     V   195
N 202     N   196
W 203     W   197
D 204     D   198
D 205     A   199
V 206     A   200
E 207     E   201
R 208     K   202
R 209     K   203
L 210     L   204
Q 211     Q   205
K 212     K   206
A 213     Y   207
L 214     L   208
TER
END

