
PFRMAT AL
TARGET T0128
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.80 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: rrm
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1b7f_A
L  41     G   205
H  42     E   206
H  43     S   207
Q  44     I   208
K  45     K   209
H  46     D   210
H  47     T   211
Q  48     N   212
G  49     L   213
Y  50     Y   214
V  51     V   215
N  52     T   216
G  53     N   217
A  54     L   218
N  55     P   219
A  56     R   220
A  57     T   221
L  58     I   222
E  59     T   223
A 112     D   224
D 113     D   225
L 114     Q   226
I 115     L   227
N 116     D   228
K 117     T   229
F 118     I   230
F 119     F   231
G 120     G   232
S 121     K   233
F 122     Y   234
E 123     G   235
K 124     S   236
F 125     I   237
K 126     V   238
E 127     Q   239
E 128     N   241
F 129     I   242
S 130     L   243
Q 131     R   244
A 132     D   245
A 133     K   246
K 134     L   247
N 135     T   248
V 136     G   249
E 137     R   250
G 138     P   251
V 139     R   252
G 140     G   253
W 141     V   254
A 142     A   255
I 143     F   256
L 144     V   257
V 145     R   258
Y 146     Y   259
E 147     N   260
P 148     K   261
L 149     R   262
E 150     E   263
E 151     E   264
Q 152     A   265
L 153     Q   266
L 154     E   267
I 155     A   268
L 156     I   269
Q 157     S   270
I 158     A   271
E 159     L   272
K 160     N   273
H 161     N   274
N 162     V   275
L 163     I   276
M 164     P   277
H 165     E   278
A 166     G   279
A 167     G   280
D 168     S   281
A 169     Q   282
Q 170     P   283
V 171     L   284
L 172     S   285
L 173     V   286
A 174     R   287
L 175     L   288
D 176     A   289
TER
END

