
PFRMAT AL
TARGET T0128
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.55 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: ModA
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1wod
H   8     E    27
H   9     K    28
H  10     G    29
G  11     V    30
S  12     D    31
V  13     V    32
T  14     V    33
T  15     S    34
K  16     S    35
R  17     F    36
Y  18     A    37
T  19     S    38
L  20     S    39
P  21     S    40
P  22     T    41
L  23     L    42
P  24     A    43
Y  25     R    44
A  26     Q    45
Y  27     I    46
N  28     E    47
A  29     A    48
L  30     G    49
E  31     A    50
P  32     P    51
Y  33     F    55
I  34     I    56
S  35     S    57
A  36     A    58
E  37     D    59
I  38     Q    60
M  39     K    61
Q  40     W    62
L  41     M    63
H  42     D    64
H  43     Y    65
Q  44     A    66
K  45     V    67
H  46     D    68
H  47     K    69
Q  48     K    70
G  49     A    71
Y  50     I    72
V  51     D    73
N  52     T    74
G  53     A    75
A  54     T    76
N  55     R    77
A  56     Q    78
A  57     T    79
L  58     L    80
E  59     L    81
K  60     G    82
L  61     N    83
E  62     S    84
K  63     L    85
F  64     V    86
R  65     V    87
K  66     V    88
G  67     A    89
E  68     P    90
A  69     K    91
Q  70     A    92
I  71     S    93
D  72     V    94
I  73     Q    95
R  74     K    96
A  75     D    97
V  76     F    98
L  77     T    99
R  78     I   100
D  79     D   101
L  80     S   102
S  81     K   103
F  82     T   104
H  83     N   105
L  84     W   106
N  85     T   107
G  86     S   108
H  87     L   109
I  88     L   110
L  89     N   111
H  90     G   112
P  95     G   113
N  96     R   114
M  97     L   115
A  98     A   116
P  99     V   117
P 100     G   118
G 101     D   119
K 102     P   120
G 103     E   121
G 104     H   122
G 105     V   123
P 107     P   124
G 108     A   125
G 109     G   126
K 110     I   127
I 111     Y   128
A 112     A   129
D 113     K   130
L 114     E   131
I 115     A   132
N 116     L   133
K 117     Q   134
F 118     K   135
F 119     L   136
G 120     G   137
S 121     A   138
F 122     W   139
E 123     D   140
K 124     T   141
F 125     L   142
K 126     S   143
E 127     P   144
A 132     K   145
A 133     L   146
K 134     A   147
N 135     P   148
V 136     A   149
E 137     E   150
G 138     D   151
V 139     V   152
G 140     R   153
W 141     G   154
A 142     A   155
I 143     L   156
L 144     A   157
V 145     L   158
Y 146     V   159
E 147     E   160
P 148     R   161
L 149     N   162
E 150     E   163
E 151     A   164
Q 152     P   165
L 153     L   166
L 154     G   167
I 155     I   168
L 156     V   169
Q 157     Y   170
I 158     G   171
E 159     S   172
K 160     D   173
H 161     A   174
N 162     V   175
H 165     A   176
A 166     V   182
A 167     V   183
D 168     A   184
A 169     T   185
Q 170     F   186
V 171     P   187
L 172     E   188
L 173     D   189
A 174     S   190
L 175     H   191
D 176     K   192
V 177     K   193
W 178     V   194
E 179     E   195
H 180     Y   196
A 181     P   197
Y 182     V   198
Y 183     A   199
L 184     V   200
Q 185     V   201
Y 186     E   202
K 187     G   203
D 189     H   204
R 190     N   205
G 191     N   206
S 192     A   207
Y 193     T   208
V 194     V   209
D 195     K   210
N 196     A   211
W 197     F   212
W 198     Y   213
N 199     D   214
V 200     Y   215
V 201     L   216
N 202     K   217
W 203     G   218
D 204     P   219
D 205     Q   220
V 206     A   221
E 207     A   222
R 208     E   223
R 209     I   224
L 210     F   225
Q 211     K   226
K 212     R   227
A 213     Y   228
Q 217     G   229
I 218     F   230
A 219     T   231
L 220     I   232
K 221     K   233
TER
END

