
PFRMAT AL
TARGET T0128
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1ids_A
K   16 A 2
R   17 E 3
Y   18 Y 4
T   19 T 5
L   20 L 6
P   21 P 7
P   22 D 8
L   23 L 9
P   24 D 10
Y   25 W 11
A   26 D 12
Y   27 Y 13
N   28 G 14
A   29 A 15
L   30 L 16
E   31 E 17
P   32 P 18
Y   33 H 19
I   34 I 20
S   35 S 21
A   36 G 22
E   37 Q 23
I   38 I 24
M   39 N 25
Q   40 E 26
L   41 L 27
H   42 H 28
H   43 H 29
Q   44 S 30
K   45 K 31
H   46 H 32
H   47 H 33
Q   48 A 34
G   49 T 35
Y   50 Y 36
V   51 V 37
N   52 K 38
G   53 G 39
A   54 A 40
N   55 N 41
A   56 D 42
A   57 A 43
L   58 V 44
E   59 A 45
K   60 K 46
L   61 L 47
E   62 E 48
K   63 E 49
F   64 A 50
R   65 R 51
K   66 A 52
G   67 K 53
E   68 E 54
A   69 D 55
Q   70 H 56
I   71 S 57
D   72 A 58
I   73 I 59
R   74 L 60
A   75 L 61
V   76 N 62
L   77 E 63
R   78 K 64
D   79 N 65
L   80 L 66
S   81 A 67
F   82 F 68
H   83 N 69
L   84 L 70
N   85 A 71
G   86 G 72
H   87 H 73
I   88 V 74
L   89 N 75
H   90 H 76
S   91 T 77
I   92 I 78
F   93 W 79
W   94 W 80
P   95 K 81
N   96 N 82
M   97 L 83
A   98 S 84
P   99 P 85
K  102 N 86
G  103 G 87
G  104 G 88
G  105 D 89
K  106 K 90
P  107 P 91
G  108 T 92
G  109 G 93
K  110 E 94
I  111 L 95
A  112 A 96
D  113 A 97
L  114 A 98
I  115 I 99
N  116 A 100
K  117 D 101
F  118 A 102
F  119 F 103
G  120 G 104
S  121 S 105
F  122 F 106
E  123 D 107
K  124 K 108
F  125 F 109
K  126 R 110
E  127 A 111
E  128 Q 112
F  129 F 113
S  130 H 114
Q  131 A 115
A  132 A 116
A  133 A 117
K  134 T 118
N  135 T 119
V  136 V 120
E  137 Q 121
G  138 G 122
V  139 S 123
G  140 G 124
W  141 W 125
A  142 A 126
I  143 A 127
L  144 L 128
V  145 G 129
Y  146 W 130
E  147 D 131
P  148 T 132
L  149 L 133
E  150 G 134
E  151 N 135
Q  152 K 136
L  153 L 137
L  154 L 138
I  155 I 139
L  156 F 140
Q  157 Q 141
I  158 V 142
E  159 Y 143
K  160 D 144
H  161 H 145
N  162 Q 146
L  163 T 147
M  164 N 148
H  165 F 149
A  166 P 150
A  167 L 151
D  168 G 152
A  169 I 153
Q  170 V 154
V  171 P 155
L  172 L 156
L  173 L 157
A  174 L 158
L  175 L 159
D  176 D 160
V  177 M 161
W  178 W 162
E  179 E 163
H  180 H 164
A  181 A 165
Y  182 F 166
Y  183 Y 167
L  184 L 168
Q  185 Q 169
Y  186 Y 170
K  187 K 171
N  188 N 172
D  189 V 173
R  190 K 174
G  191 V 175
S  192 D 176
Y  193 F 177
V  194 A 178
D  195 K 179
N  196 A 180
W  197 F 181
W  198 W 182
N  199 N 183
V  200 V 184
V  201 V 185
N  202 N 186
W  203 W 187
D  204 A 188
D  205 D 189
V  206 V 190
E  207 Q 191
R  208 S 192
R  209 R 193
L  210 Y 194
Q  211 A 195
K  212 A 196
A  213 A 197
L  214 T 198
N  215 S 199
TER
END

