
PFRMAT AL
TARGET T0128
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1isa_A
R   17 S 1
Y   18 F 2
T   19 E 3
L   20 L 4
P   21 P 5
P   22 A 6
L   23 L 7
P   24 P 8
Y   25 Y 9
A   26 A 10
Y   27 K 11
N   28 D 12
A   29 A 13
L   30 L 14
E   31 A 15
P   32 P 16
Y   33 H 17
I   34 I 18
S   35 S 19
A   36 A 20
E   37 E 21
I   38 T 22
M   39 I 23
Q   40 E 24
L   41 Y 25
H   42 H 26
H   43 Y 27
Q   44 G 28
K   45 K 29
H   46 H 30
H   47 H 31
Q   48 Q 32
G   49 T 33
Y   50 Y 34
V   51 V 35
N   52 T 36
G   53 N 37
A   54 L 38
N   55 N 39
A   56 N 40
A   57 L 41
L   58 I 42
E   59 K 43
K   60 G 44
L   61 T 45
E   62 A 46
K   63 F 47
F   64 E 48
R   65 G 49
K   66 K 50
G   67 S 51
E   68 L 52
A   69 E 53
Q   70 E 54
I   71 I 55
I   73 I 56
R   74 R 57
A   75 S 58
V   76 S 59
L   77 E 60
R   78 G 61
D   79 G 62
L   80 V 63
S   81 F 64
F   82 N 65
H   83 N 66
L   84 A 67
N   85 A 68
G   86 Q 69
H   87 V 70
I   88 W 71
L   89 N 72
H   90 H 73
S   91 T 74
I   92 F 75
F   93 Y 76
W   94 W 77
P   95 N 78
N   96 C 79
M   97 L 80
A   98 A 81
P   99 P 82
K  102 N 83
G  103 A 84
G  104 G 85
G  105 G 86
K  106 E 87
P  107 P 88
G  108 T 89
G  109 G 90
K  110 K 91
I  111 V 92
A  112 A 93
D  113 E 94
L  114 A 95
I  115 I 96
N  116 A 97
K  117 A 98
F  118 S 99
F  119 F 100
G  120 G 101
S  121 S 102
F  122 F 103
E  123 A 104
K  124 D 105
F  125 F 106
K  126 K 107
E  127 A 108
E  128 Q 109
F  129 F 110
S  130 T 111
Q  131 D 112
A  132 A 113
A  133 A 114
K  134 I 115
N  135 K 116
V  136 N 117
E  137 F 118
G  138 G 119
V  139 S 120
G  140 G 121
W  141 W 122
A  142 T 123
I  143 W 124
L  144 L 125
V  145 V 126
Y  146 K 127
E  147 N 128
P  148 S 129
E  150 D 130
E  151 G 131
Q  152 K 132
L  153 L 133
L  154 A 134
I  155 I 135
L  156 V 136
Q  157 S 137
I  158 T 138
E  159 S 139
K  160 N 140
H  161 A 141
N  162 G 142
L  163 T 143
M  164 P 144
H  165 L 145
A  166 T 146
A  167 T 147
D  168 D 148
A  169 A 149
Q  170 T 150
V  171 P 151
L  172 L 152
L  173 L 153
A  174 T 154
L  175 V 155
D  176 D 156
V  177 V 157
W  178 W 158
E  179 E 159
H  180 H 160
A  181 A 161
Y  182 Y 162
Y  183 Y 163
L  184 I 164
Q  185 D 165
Y  186 Y 166
K  187 R 167
N  188 N 168
D  189 A 169
R  190 R 170
G  191 P 171
S  192 G 172
Y  193 Y 173
V  194 L 174
D  195 E 175
N  196 H 176
W  197 F 177
W  198 W 178
N  199 A 179
V  200 L 180
V  201 V 181
N  202 N 182
W  203 W 183
D  204 E 184
D  205 F 185
V  206 V 186
E  207 A 187
R  208 K 188
R  209 N 189
L  210 L 190
Q  211 A 191
K  212 A 192
TER
END

