
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   56 (  224),  selected   56 , name T0295AL586_1-D2
# Molecule2: number of CA atoms   95 (  803),  selected   56 , name T0295_D2.pdb
# PARAMETERS: T0295AL586_1-D2.T0295_D2.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    18       252 - 273         4.36    21.84
  LCS_AVERAGE:     15.45

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    12       256 - 268         1.90    24.72
  LCS_AVERAGE:      7.20

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     9       259 - 268         0.89    24.50
  LCS_AVERAGE:      4.64

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   95
LCS_GDT     W     186     W     186      3    5   12     0    3    3    4    4    6    7    8   10   11   12   12   14   17   17   18   19   21   23   25 
LCS_GDT     D     187     D     187      3    5   12     1    3    3    4    5    6    7    8   13   14   14   15   16   17   19   20   20   22   23   25 
LCS_GDT     L     189     L     189      3    5   12     0    3    3    4    5    6    7    8   11   11   12   14   16   17   19   20   20   21   23   25 
LCS_GDT     L     190     L     190      3    5   12     1    3    4    4    6    9   12   13   14   14   14   14   16   17   19   20   20   22   23   25 
LCS_GDT     I     192     I     192      3    5   12     1    3    4    4    5    6    7    8   11   11   12   14   16   17   19   20   20   22   23   25 
LCS_GDT     C     193     C     193      3    5   12     0    3    4    4    5    6    7    8   11   11   12   14   16   17   19   20   20   22   23   25 
LCS_GDT     S     195     S     195      0    4   12     1    3    3    4    5    5    6    8   10   10   12   14   16   17   19   20   20   22   23   25 
LCS_GDT     H     202     H     202      3    3   12     0    0    3    4    5    6    6    8   11   11   12   14   18   21   22   25   26   26   28   28 
LCS_GDT     A     203     A     203      3    4   12     1    2    3    4    4    4    5    8   10   10   11   14   14   17   19   20   20   22   28   28 
LCS_GDT     F     205     F     205      3    4   12     0    2    3    4    4    4    6    8   10   10   12   18   20   21   22   25   26   26   28   28 
LCS_GDT     K     206     K     206      3    4   12     0    0    3    4    4    5    6    8   10   10   12   12   14   21   22   25   26   26   28   28 
LCS_GDT     N     208     N     208      3    4   14     1    2    3    4    4    5    6    7    8   10   10   12   14   15   17   21   26   26   28   28 
LCS_GDT     V     210     V     210      3    4   14     3    3    3    5    9    9   10   10   11   13   14   15   18   18   18   25   26   26   28   28 
LCS_GDT     N     212     N     212      3    4   14     3    4    6    8    9   10   10   11   13   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     M     213     M     213      3    8   14     3    3    5    7    8   10   10   11   13   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     L     214     L     214      3    8   14     3    3    4    7    7   10   10   10   11   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     N     217     N     217      6    8   14     6    6    6    8    9   10   10   10   11   13   14   15   17   17   19   20   22   23   28   28 
LCS_GDT     Y     218     Y     218      6    8   14     6    6    6    8    9   10   10   10   11   13   14   15   17   17   19   20   22   23   24   25 
LCS_GDT     K     219     K     219      6    8   14     6    6    6    8    9   10   10   10   11   13   14   15   17   17   19   20   20   22   23   25 
LCS_GDT     N     220     N     220      6    8   14     6    6    6    8    9   10   10   10   11   13   14   15   17   17   19   20   20   21   23   24 
LCS_GDT     W     221     W     221      6    8   14     6    6    6    8    9   10   10   10   11   13   14   15   17   17   19   20   20   21   23   24 
LCS_GDT     C     222     C     222      6    8   14     6    6    6    8    9   10   10   10   11   13   14   15   17   17   18   18   19   20   21   24 
LCS_GDT     N     225     N     225      0    8   14     0    1    6    8    9   10   10   10   11   13   14   15   17   17   18   18   19   20   21   22 
LCS_GDT     Q     227     Q     227      3    3   14     3    3    3    3    4    4    6    9   10   12   14   15   17   17   18   18   19   20   21   22 
LCS_GDT     V     228     V     228      3    4   14     3    3    3    4    4    4    5    8   11   11   12   12   14   17   18   18   19   20   21   22 
LCS_GDT     P     229     P     229      3    4   14     3    3    3    4    5    6    6    8   11   11   12   12   14   17   17   17   18   20   21   22 
LCS_GDT     V     230     V     230      4    4   13     3    4    4    4    4    5    7    7   11   11   12   12   14   17   17   17   18   20   21   22 
LCS_GDT     N     231     N     231      4    4   13     3    4    4    4    4    5    5    6    8    9   11   11   13   17   17   17   18   20   21   22 
LCS_GDT     F     232     F     232      4    4   13     3    4    4    4    4    5    5    6    7    8   10   10   13   15   15   17   18   20   21   22 
LCS_GDT     P     233     P     233      4    4   13     3    4    4    4    4    5    5    6    7    9   11   11   11   13   14   16   18   19   21   21 
LCS_GDT     Y     237     Y     237      0    4   13     0    1    3    4    4    5    6    8    9   10   11   13   13   13   14   16   18   19   21   21 
LCS_GDT     C     238     C     238      0    5   13     0    0    3    4    5    5    6    8    9   10   11   13   13   13   13   14   16   16   17   17 
LCS_GDT     L     242     L     242      4    5   13     3    4    4    4    5    5    6    8    9   10   11   13   13   13   14   16   18   19   21   21 
LCS_GDT     E     243     E     243      4    5   13     3    4    4    4    5    5    6    8    9   11   11   13   13   13   14   16   18   19   21   21 
LCS_GDT     L     245     L     245      4    5   13     3    4    4    4    5    5    6    8    9   10   11   13   13   13   14   16   18   19   21   21 
LCS_GDT     D     246     D     246      4    5   13     3    4    4    4    5    5    6    8    9   11   11   13   13   13   14   16   18   19   21   21 
LCS_GDT     C     248     C     248      4    4   13     1    3    4    4    4    5    6    7    8   11   11   13   13   13   14   15   17   18   21   21 
LCS_GDT     E     249     E     249      4    4   13     0    3    4    4    4    5    6    7    8   10   11   13   13   13   14   15   18   19   20   23 
LCS_GDT     S     252     S     252      4    5   18     4    4    4    5    6    7    8    9   10   11   12   14   20   21   22   25   26   26   28   28 
LCS_GDT     I     253     I     253      4    5   18     4    4    4    5    7    9   11   12   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     N     254     N     254      4    5   18     4    4    4    5    6    8   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     L     255     L     255      4    6   18     4    4    4    8    8    9   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     D     256     D     256      4   12   18     4    4    4    7   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     E     257     E     257      4   12   18     4    4    4    7   11   12   12   13   13   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     N     258     N     258      4   12   18     4    4    4    9   10   12   12   13   13   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     D     259     D     259      9   12   18     4    4    7    9   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     L     261     L     261      9   12   18     8    8    8    9   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     K     262     K     262      9   12   18     8    8    8    9   11   12   12   13   14   15   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     L     263     L     263      9   12   18     8    8    8    9   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     L     264     L     264      9   12   18     8    8    8    9   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     L     265     L     265      9   12   18     8    8    8    9   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     E     266     E     266      9   12   18     8    8    8    9   11   12   12   13   14   15   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     F     267     F     267      9   12   18     8    8    8    9   11   12   12   13   14   15   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     N     268     N     268      9   12   18     8    8    8    9   11   12   12   13   14   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     I     272     I     272      4   11   18     4    4    4    7   10   11   12   13   13   16   18   19   20   21   22   25   26   26   28   28 
LCS_GDT     H     273     H     273      4   10   18     4    4    4    7    9   11   12   12   13   14   14   15   18   18   21   25   26   26   28   28 
LCS_AVERAGE  LCS_A:   9.10  (   4.64    7.20   15.45 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      8      8      8      9     11     12     12     13     14     16     18     19     20     21     22     25     26     26     28     28 
GDT PERCENT_CA   8.42   8.42   8.42   9.47  11.58  12.63  12.63  13.68  14.74  16.84  18.95  20.00  21.05  22.11  23.16  26.32  27.37  27.37  29.47  29.47
GDT RMS_LOCAL    0.17   0.17   0.17   0.89   1.70   1.90   1.90   2.20   2.66   3.93   4.06   4.20   4.61   4.68   5.06   5.54   5.69   5.69   6.12   6.12
GDT RMS_ALL_CA  25.17  25.17  25.17  24.50  24.99  24.72  24.72  24.21  24.22  21.06  21.61  21.32  20.94  20.96  20.94  21.37  21.43  21.43  21.24  21.24

#      Molecule1      Molecule2       DISTANCE
LGA    W     186      W     186         12.619
LGA    D     187      D     187          9.876
LGA    L     189      L     189         16.241
LGA    L     190      L     190         15.170
LGA    I     192      I     192         22.744
LGA    C     193      C     193         23.627
LGA    S     195      S     195         27.409
LGA    H     202      H     202         24.918
LGA    A     203      A     203         25.698
LGA    F     205      F     205         19.746
LGA    K     206      K     206         20.775
LGA    N     208      N     208         22.557
LGA    V     210      V     210         15.888
LGA    N     212      N     212         19.587
LGA    M     213      M     213         18.245
LGA    L     214      L     214         18.183
LGA    N     217      N     217         22.094
LGA    Y     218      Y     218         20.218
LGA    K     219      K     219         27.023
LGA    N     220      N     220         29.856
LGA    W     221      W     221         26.439
LGA    C     222      C     222         30.200
LGA    N     225      N     225         38.312
LGA    Q     227      Q     227         39.813
LGA    V     228      V     228         42.125
LGA    P     229      P     229         42.122
LGA    V     230      V     230         40.725
LGA    N     231      N     231         42.734
LGA    F     232      F     232         39.401
LGA    P     233      P     233         40.448
LGA    Y     237      Y     237         41.649
LGA    C     238      C     238         40.710
LGA    L     242      L     242         32.874
LGA    E     243      E     243         35.776
LGA    L     245      L     245         28.809
LGA    D     246      D     246         27.058
LGA    C     248      C     248         23.408
LGA    E     249      E     249         22.297
LGA    S     252      S     252         14.167
LGA    I     253      I     253          9.736
LGA    N     254      N     254         10.475
LGA    L     255      L     255          8.152
LGA    D     256      D     256          2.743
LGA    E     257      E     257          2.576
LGA    N     258      N     258          2.277
LGA    D     259      D     259          2.161
LGA    L     261      L     261          1.120
LGA    K     262      K     262          1.601
LGA    L     263      L     263          2.311
LGA    L     264      L     264          1.621
LGA    L     265      L     265          1.335
LGA    E     266      E     266          2.547
LGA    F     267      F     267          2.307
LGA    N     268      N     268          1.094
LGA    I     272      I     272          3.507
LGA    H     273      H     273          6.073

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   56   95    4.0     13    2.20    14.474    12.562     0.565

LGA_LOCAL      RMSD =  2.199  Number of atoms =   13  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 24.210  Number of atoms =   56 
Std_ALL_ATOMS  RMSD = 13.783  (standard rmsd on all 56 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.825607 * X  +   0.350896 * Y  +   0.441866 * Z  + -14.257920
  Y_new =   0.012688 * X  +   0.771366 * Y  +  -0.636266 * Z  +  -3.699930
  Z_new =  -0.564103 * X  +   0.530912 * Y  +   0.632393 * Z  + -20.592255 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   0.698383   -2.443209  [ DEG:    40.0144   -139.9856 ]
  Theta =   0.599346    2.542246  [ DEG:    34.3400    145.6600 ]
  Phi   =   0.015367   -3.126226  [ DEG:     0.8804   -179.1196 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0295AL586_1-D2                               
REMARK     2: T0295_D2.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0295AL586_1-D2.T0295_D2.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   56   95   4.0   13   2.20  12.562    13.78
REMARK  ---------------------------------------------------------- 
MOLECULE T0295AL586_1-D2
REMARK Aligment from pdb entry: 1ak0
ATOM    461  N   TRP   186      11.904   4.971   7.058  1.00  0.00              
ATOM    462  CA  TRP   186      12.798   4.292   6.127  1.00  0.00              
ATOM    463  C   TRP   186      14.193   4.911   6.272  1.00  0.00              
ATOM    464  O   TRP   186      15.190   4.202   6.379  1.00  0.00              
ATOM    465  N   ASP   187      14.249   6.237   6.350  1.00  0.00              
ATOM    466  CA  ASP   187      15.515   6.942   6.488  1.00  0.00              
ATOM    467  C   ASP   187      16.249   6.505   7.759  1.00  0.00              
ATOM    468  O   ASP   187      17.480   6.380   7.766  1.00  0.00              
ATOM    469  N   LEU   189      18.066   3.300   7.142  1.00  0.00              
ATOM    470  CA  LEU   189      19.157   3.559   6.217  1.00  0.00              
ATOM    471  C   LEU   189      20.326   4.218   6.959  1.00  0.00              
ATOM    472  O   LEU   189      21.491   3.851   6.752  1.00  0.00              
ATOM    473  N   LEU   190      20.018   5.203   7.807  1.00  0.00              
ATOM    474  CA  LEU   190      21.042   5.898   8.592  1.00  0.00              
ATOM    475  C   LEU   190      21.768   4.892   9.485  1.00  0.00              
ATOM    476  O   LEU   190      23.007   4.843   9.489  1.00  0.00              
ATOM    477  N   ILE   192      24.303   3.021   7.521  1.00  0.00              
ATOM    478  CA  ILE   192      25.466   3.780   7.052  1.00  0.00              
ATOM    479  C   ILE   192      26.461   4.041   8.200  1.00  0.00              
ATOM    480  O   ILE   192      27.676   3.938   8.027  1.00  0.00              
ATOM    481  N   CYS   193      25.921   4.350   9.371  1.00  0.00              
ATOM    482  CA  CYS   193      26.736   4.653  10.542  1.00  0.00              
ATOM    483  C   CYS   193      27.222   3.460  11.339  1.00  0.00              
ATOM    484  O   CYS   193      28.317   3.481  11.902  1.00  0.00              
ATOM    485  N   SER   195      26.253  -0.709   5.352  1.00  0.00              
ATOM    486  CA  SER   195      26.798   0.257   4.400  1.00  0.00              
ATOM    487  C   SER   195      28.029   1.004   4.872  1.00  0.00              
ATOM    488  O   SER   195      28.700   1.647   4.073  1.00  0.00              
ATOM    489  N   HIS   202      31.076   0.934   2.774  1.00  0.00              
ATOM    490  CA  HIS   202      30.817   1.458   1.416  1.00  0.00              
ATOM    491  C   HIS   202      30.628   2.969   1.305  1.00  0.00              
ATOM    492  O   HIS   202      31.030   3.583   0.309  1.00  0.00              
ATOM    493  N   ALA   203      29.921   3.529   2.287  1.00  0.00              
ATOM    494  CA  ALA   203      29.594   4.949   2.346  1.00  0.00              
ATOM    495  C   ALA   203      30.641   5.945   1.828  1.00  0.00              
ATOM    496  O   ALA   203      30.317   6.801   1.004  1.00  0.00              
ATOM    497  N   PHE   205      30.811   6.393  -1.955  1.00  0.00              
ATOM    498  CA  PHE   205      29.693   7.064  -2.610  1.00  0.00              
ATOM    499  C   PHE   205      29.998   8.535  -2.922  1.00  0.00              
ATOM    500  O   PHE   205      29.441   9.096  -3.864  1.00  0.00              
ATOM    501  N   LYS   206      30.841   9.174  -2.109  1.00  0.00              
ATOM    502  CA  LYS   206      31.161  10.582  -2.317  1.00  0.00              
ATOM    503  C   LYS   206      32.613  10.825  -2.653  1.00  0.00              
ATOM    504  O   LYS   206      33.046  11.969  -2.794  1.00  0.00              
ATOM    505  N   ASN   208      33.824  13.687  -5.169  1.00  0.00              
ATOM    506  CA  ASN   208      32.812  14.716  -5.393  1.00  0.00              
ATOM    507  C   ASN   208      33.395  16.088  -5.041  1.00  0.00              
ATOM    508  O   ASN   208      33.908  16.287  -3.935  1.00  0.00              
ATOM    509  N   VAL   210      32.401  20.333  -5.528  1.00  0.00              
ATOM    510  CA  VAL   210      31.508  21.346  -6.089  1.00  0.00              
ATOM    511  C   VAL   210      32.170  22.233  -7.149  1.00  0.00              
ATOM    512  O   VAL   210      31.490  22.917  -7.907  1.00  0.00              
ATOM    513  N   ASN   212      33.721  21.099  -9.550  1.00  0.00              
ATOM    514  CA  ASN   212      33.799  20.245 -10.736  1.00  0.00              
ATOM    515  C   ASN   212      32.453  19.525 -10.846  1.00  0.00              
ATOM    516  O   ASN   212      32.401  18.305 -10.981  1.00  0.00              
ATOM    517  N   MET   213      31.350  20.285 -10.882  1.00  0.00              
ATOM    518  CA  MET   213      30.013  19.691 -10.964  1.00  0.00              
ATOM    519  C   MET   213      29.698  18.790 -12.146  1.00  0.00              
ATOM    520  O   MET   213      28.959  17.838 -11.981  1.00  0.00              
ATOM    521  N   LEU   214      30.258  19.065 -13.324  1.00  0.00              
ATOM    522  CA  LEU   214      29.984  18.212 -14.485  1.00  0.00              
ATOM    523  C   LEU   214      30.660  16.855 -14.314  1.00  0.00              
ATOM    524  O   LEU   214      30.017  15.819 -14.442  1.00  0.00              
ATOM    525  N   ASN   217      31.692  15.492 -11.561  1.00  0.00              
ATOM    526  CA  ASN   217      31.089  14.818 -10.428  1.00  0.00              
ATOM    527  C   ASN   217      29.750  14.188 -10.811  1.00  0.00              
ATOM    528  O   ASN   217      29.551  12.985 -10.661  1.00  0.00              
ATOM    529  N   TYR   218      28.846  14.993 -11.350  1.00  0.00              
ATOM    530  CA  TYR   218      27.526  14.498 -11.743  1.00  0.00              
ATOM    531  C   TYR   218      27.579  13.402 -12.799  1.00  0.00              
ATOM    532  O   TYR   218      26.755  12.490 -12.780  1.00  0.00              
ATOM    533  N   LYS   219      28.522  13.482 -13.732  1.00  0.00              
ATOM    534  CA  LYS   219      28.651  12.424 -14.740  1.00  0.00              
ATOM    535  C   LYS   219      29.016  11.105 -14.033  1.00  0.00              
ATOM    536  O   LYS   219      28.616  10.024 -14.468  1.00  0.00              
ATOM    537  N   ASN   220      29.760  11.211 -12.933  1.00  0.00              
ATOM    538  CA  ASN   220      30.161  10.048 -12.165  1.00  0.00              
ATOM    539  C   ASN   220      28.918   9.409 -11.527  1.00  0.00              
ATOM    540  O   ASN   220      28.744   8.183 -11.560  1.00  0.00              
ATOM    541  N   TRP   221      28.061  10.238 -10.942  1.00  0.00              
ATOM    542  CA  TRP   221      26.822   9.771 -10.312  1.00  0.00              
ATOM    543  C   TRP   221      25.952   9.088 -11.374  1.00  0.00              
ATOM    544  O   TRP   221      25.329   8.060 -11.101  1.00  0.00              
ATOM    545  N   CYS   222      25.904   9.669 -12.577  1.00  0.00              
ATOM    546  CA  CYS   222      25.109   9.112 -13.682  1.00  0.00              
ATOM    547  C   CYS   222      25.641   7.769 -14.166  1.00  0.00              
ATOM    548  O   CYS   222      24.873   6.844 -14.410  1.00  0.00              
ATOM    549  N   ASN   225      23.727   4.285 -14.126  1.00  0.00              
ATOM    550  CA  ASN   225      23.518   3.717 -15.457  1.00  0.00              
ATOM    551  C   ASN   225      24.041   2.282 -15.584  1.00  0.00              
ATOM    552  O   ASN   225      23.458   1.451 -16.286  1.00  0.00              
ATOM    553  N   GLN   227      23.829  -0.049 -13.506  1.00  0.00              
ATOM    554  CA  GLN   227      22.851  -0.975 -12.951  1.00  0.00              
ATOM    555  C   GLN   227      21.765  -1.366 -13.942  1.00  0.00              
ATOM    556  O   GLN   227      21.043  -2.332 -13.718  1.00  0.00              
ATOM    557  N   VAL   228      21.625  -0.615 -15.029  1.00  0.00              
ATOM    558  CA  VAL   228      20.603  -0.946 -16.017  1.00  0.00              
ATOM    559  C   VAL   228      20.936  -2.300 -16.628  1.00  0.00              
ATOM    560  O   VAL   228      20.082  -3.189 -16.741  1.00  0.00              
ATOM    561  N   PRO   229      22.212  -2.480 -16.935  1.00  0.00              
ATOM    562  CA  PRO   229      22.698  -3.716 -17.535  1.00  0.00              
ATOM    563  C   PRO   229      22.794  -4.920 -16.606  1.00  0.00              
ATOM    564  O   PRO   229      22.594  -6.052 -17.044  1.00  0.00              
ATOM    565  N   VAL   230      23.089  -4.692 -15.333  1.00  0.00              
ATOM    566  CA  VAL   230      23.254  -5.804 -14.410  1.00  0.00              
ATOM    567  C   VAL   230      22.071  -6.121 -13.542  1.00  0.00              
ATOM    568  O   VAL   230      21.889  -7.278 -13.160  1.00  0.00              
ATOM    569  N   ASN   231      21.240  -5.124 -13.257  1.00  0.00              
ATOM    570  CA  ASN   231      20.109  -5.345 -12.367  1.00  0.00              
ATOM    571  C   ASN   231      18.724  -5.018 -12.919  1.00  0.00              
ATOM    572  O   ASN   231      17.764  -5.757 -12.694  1.00  0.00              
ATOM    573  N   PHE   232      18.606  -3.916 -13.650  1.00  0.00              
ATOM    574  CA  PHE   232      17.284  -3.526 -14.138  1.00  0.00              
ATOM    575  C   PHE   232      16.708  -4.417 -15.236  1.00  0.00              
ATOM    576  O   PHE   232      15.566  -4.855 -15.138  1.00  0.00              
ATOM    577  N   PRO   233      17.483  -4.665 -16.277  1.00  0.00              
ATOM    578  CA  PRO   233      17.013  -5.505 -17.368  1.00  0.00              
ATOM    579  C   PRO   233      18.195  -6.308 -17.908  1.00  0.00              
ATOM    580  O   PRO   233      18.529  -6.238 -19.101  1.00  0.00              
ATOM    581  N   TYR   237      10.907  -9.474 -19.027  1.00  0.00              
ATOM    582  CA  TYR   237      10.128  -8.828 -17.969  1.00  0.00              
ATOM    583  C   TYR   237       8.623  -8.673 -18.237  1.00  0.00              
ATOM    584  O   TYR   237       7.850  -8.387 -17.322  1.00  0.00              
ATOM    585  N   CYS   238       8.214  -8.837 -19.489  1.00  0.00              
ATOM    586  CA  CYS   238       6.823  -8.662 -19.854  1.00  0.00              
ATOM    587  C   CYS   238       6.110  -9.982 -19.950  1.00  0.00              
ATOM    588  O   CYS   238       5.173 -10.123 -20.750  1.00  0.00              
ATOM    589  N   LEU   242       5.957  -9.619 -11.925  1.00  0.00              
ATOM    590  CA  LEU   242       7.302  -9.337 -11.459  1.00  0.00              
ATOM    591  C   LEU   242       7.492  -9.645  -9.985  1.00  0.00              
ATOM    592  O   LEU   242       8.622  -9.692  -9.484  1.00  0.00              
ATOM    593  N   GLU   243       6.392  -9.812  -9.273  1.00  0.00              
ATOM    594  CA  GLU   243       6.467 -10.138  -7.854  1.00  0.00              
ATOM    595  C   GLU   243       6.298 -11.662  -7.755  1.00  0.00              
ATOM    596  O   GLU   243       5.369 -12.213  -8.333  1.00  0.00              
ATOM    597  N   LEU   245      11.358 -11.035  -9.529  1.00  0.00              
ATOM    598  CA  LEU   245      12.095  -9.865 -10.018  1.00  0.00              
ATOM    599  C   LEU   245      12.264  -8.874  -8.853  1.00  0.00              
ATOM    600  O   LEU   245      13.340  -8.320  -8.652  1.00  0.00              
ATOM    601  N   ASP   246      11.198  -8.692  -8.080  1.00  0.00              
ATOM    602  CA  ASP   246      11.175  -7.809  -6.909  1.00  0.00              
ATOM    603  C   ASP   246      12.302  -8.161  -5.953  1.00  0.00              
ATOM    604  O   ASP   246      13.085  -7.305  -5.518  1.00  0.00              
ATOM    605  N   CYS   248      15.840  -7.065  -7.017  1.00  0.00              
ATOM    606  CA  CYS   248      16.161  -5.637  -7.160  1.00  0.00              
ATOM    607  C   CYS   248      15.955  -4.745  -5.941  1.00  0.00              
ATOM    608  O   CYS   248      16.535  -3.664  -5.851  1.00  0.00              
ATOM    609  N   GLU   249      15.172  -5.202  -4.980  1.00  0.00              
ATOM    610  CA  GLU   249      14.874  -4.391  -3.815  1.00  0.00              
ATOM    611  C   GLU   249      16.090  -3.921  -3.004  1.00  0.00              
ATOM    612  O   GLU   249      16.086  -2.807  -2.471  1.00  0.00              
ATOM    613  N   SER   252      18.990  -3.184  -4.281  1.00  0.00              
ATOM    614  CA  SER   252      19.585  -2.119  -5.088  1.00  0.00              
ATOM    615  C   SER   252      18.815  -0.807  -4.887  1.00  0.00              
ATOM    616  O   SER   252      19.421   0.262  -4.820  1.00  0.00              
ATOM    617  N   ILE   253      17.494  -0.884  -4.759  1.00  0.00              
ATOM    618  CA  ILE   253      16.686   0.320  -4.548  1.00  0.00              
ATOM    619  C   ILE   253      17.078   0.980  -3.227  1.00  0.00              
ATOM    620  O   ILE   253      17.272   2.190  -3.169  1.00  0.00              
ATOM    621  N   ASN   254      17.231   0.190  -2.170  1.00  0.00              
ATOM    622  CA  ASN   254      17.617   0.766  -0.881  1.00  0.00              
ATOM    623  C   ASN   254      18.994   1.389  -0.966  1.00  0.00              
ATOM    624  O   ASN   254      19.196   2.498  -0.511  1.00  0.00              
ATOM    625  N   LEU   255      19.913   0.696  -1.624  1.00  0.00              
ATOM    626  CA  LEU   255      21.267   1.173  -1.822  1.00  0.00              
ATOM    627  C   LEU   255      21.293   2.521  -2.584  1.00  0.00              
ATOM    628  O   LEU   255      22.027   3.437  -2.216  1.00  0.00              
ATOM    629  N   ASP   256      20.465   2.659  -3.618  1.00  0.00              
ATOM    630  CA  ASP   256      20.438   3.893  -4.410  1.00  0.00              
ATOM    631  C   ASP   256      19.817   5.077  -3.657  1.00  0.00              
ATOM    632  O   ASP   256      20.224   6.210  -3.838  1.00  0.00              
ATOM    633  N   GLU   257      18.823   4.808  -2.825  1.00  0.00              
ATOM    634  CA  GLU   257      18.185   5.847  -2.023  1.00  0.00              
ATOM    635  C   GLU   257      19.225   6.335  -0.999  1.00  0.00              
ATOM    636  O   GLU   257      19.346   7.547  -0.760  1.00  0.00              
ATOM    637  N   ASN   258      19.986   5.400  -0.413  1.00  0.00              
ATOM    638  CA  ASN   258      21.005   5.753   0.575  1.00  0.00              
ATOM    639  C   ASN   258      22.130   6.598  -0.041  1.00  0.00              
ATOM    640  O   ASN   258      22.589   7.578   0.568  1.00  0.00              
ATOM    641  N   ASP   259      22.564   6.247  -1.247  1.00  0.00              
ATOM    642  CA  ASP   259      23.610   7.012  -1.923  1.00  0.00              
ATOM    643  C   ASP   259      23.153   8.455  -2.177  1.00  0.00              
ATOM    644  O   ASP   259      23.932   9.397  -1.988  1.00  0.00              
ATOM    645  N   LEU   261      23.222  10.452   1.102  1.00  0.00              
ATOM    646  CA  LEU   261      24.583  10.723   1.557  1.00  0.00              
ATOM    647  C   LEU   261      25.285  11.762   0.670  1.00  0.00              
ATOM    648  O   LEU   261      26.021  12.645   1.171  1.00  0.00              
ATOM    649  N   LYS   262      25.076  11.661  -0.644  1.00  0.00              
ATOM    650  CA  LYS   262      25.684  12.609  -1.584  1.00  0.00              
ATOM    651  C   LYS   262      25.110  14.017  -1.433  1.00  0.00              
ATOM    652  O   LYS   262      25.844  14.999  -1.579  1.00  0.00              
ATOM    653  N   LEU   263      23.803  14.111  -1.168  1.00  0.00              
ATOM    654  CA  LEU   263      23.146  15.409  -0.990  1.00  0.00              
ATOM    655  C   LEU   263      23.706  16.100   0.259  1.00  0.00              
ATOM    656  O   LEU   263      24.018  17.306   0.229  1.00  0.00              
ATOM    657  N   LEU   264      23.840  15.347   1.353  1.00  0.00              
ATOM    658  CA  LEU   264      24.398  15.891   2.592  1.00  0.00              
ATOM    659  C   LEU   264      25.788  16.469   2.343  1.00  0.00              
ATOM    660  O   LEU   264      26.057  17.609   2.696  1.00  0.00              
ATOM    661  N   LEU   265      26.666  15.702   1.702  1.00  0.00              
ATOM    662  CA  LEU   265      28.025  16.173   1.420  1.00  0.00              
ATOM    663  C   LEU   265      28.084  17.373   0.475  1.00  0.00              
ATOM    664  O   LEU   265      28.980  18.214   0.575  1.00  0.00              
ATOM    665  N   GLU   266      27.150  17.442  -0.463  1.00  0.00              
ATOM    666  CA  GLU   266      27.130  18.543  -1.416  1.00  0.00              
ATOM    667  C   GLU   266      26.809  19.835  -0.683  1.00  0.00              
ATOM    668  O   GLU   266      27.491  20.838  -0.866  1.00  0.00              
ATOM    669  N   PHE   267      25.788  19.798   0.161  1.00  0.00              
ATOM    670  CA  PHE   267      25.377  20.953   0.949  1.00  0.00              
ATOM    671  C   PHE   267      26.522  21.402   1.876  1.00  0.00              
ATOM    672  O   PHE   267      26.800  22.610   2.007  1.00  0.00              
ATOM    673  N   ASN   268      27.195  20.441   2.503  1.00  0.00              
ATOM    674  CA  ASN   268      28.307  20.772   3.393  1.00  0.00              
ATOM    675  C   ASN   268      29.432  21.482   2.654  1.00  0.00              
ATOM    676  O   ASN   268      30.026  22.403   3.200  1.00  0.00              
ATOM    677  N   ILE   272      29.199  23.275  -0.153  1.00  0.00              
ATOM    678  CA  ILE   272      28.693  24.568  -0.594  1.00  0.00              
ATOM    679  C   ILE   272      28.745  25.540   0.561  1.00  0.00              
ATOM    680  O   ILE   272      29.087  26.702   0.375  1.00  0.00              
ATOM    681  N   HIS   273      28.360  25.076   1.742  1.00  0.00              
ATOM    682  CA  HIS   273      28.397  25.940   2.903  1.00  0.00              
ATOM    683  C   HIS   273      29.816  26.267   3.355  1.00  0.00              
ATOM    684  O   HIS   273      30.023  27.405   3.791  1.00  0.00              
END
