
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  132 (  132),  selected  132 , name T0302TS168_3
# Molecule2: number of CA atoms  132 ( 2145),  selected  132 , name T0302.pdb
# PARAMETERS: T0302TS168_3.T0302.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   132         1 - 132         3.68     3.68
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    54        17 - 70          1.95     3.72
  LONGEST_CONTINUOUS_SEGMENT:    54        18 - 71          1.98     3.72
  LONGEST_CONTINUOUS_SEGMENT:    54        19 - 72          1.90     3.71
  LCS_AVERAGE:     30.50

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    17       101 - 117         0.98     4.14
  LCS_AVERAGE:      9.50

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  132
LCS_GDT     S       1     S       1      3   15  132     0    3    7   13   15   16   17   18   21   23   31   34   51   54   73  109  116  118  125  129 
LCS_GDT     M       2     M       2      3   15  132     3    4    9   13   15   16   30   45   53   66   97  114  121  124  124  128  130  131  131  131 
LCS_GDT     V       3     V       3      3   15  132     4    5    6   12   15   17   36   52   86  102  112  118  121  124  127  129  130  131  131  131 
LCS_GDT     S       4     S       4      8   15  132     4    5    9   13   16   41   50   88  106  112  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     P       5     P       5     11   15  132     7   10   11   13   33   58   97  103  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E       6     E       6     11   15  132     7   10   11   13   15   21   83   96  108  112  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E       7     E       7     11   15  132     7   10   11   13   15   16   31   52   91  112  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A       8     A       8     11   15  132     7   10   11   13   37   81   94  104  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     V       9     V       9     11   15  132     7   26   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      10     K      10     11   15  132     7   10   43   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     W      11     W      11     11   15  132     7   10   10   13   16   46   90   97  110  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     G      12     G      12     11   15  132     4   11   21   31   47   70   83   96  105  113  115  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      13     E      13     11   15  132     4   11   22   34   59   83   93  104  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S      14     S      14     11   15  132     6   12   24   45   72   83   93  104  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      15     F      15     11   15  132     6    7   11   14   19   27   62   79   96  109  113  118  121  124  127  129  130  131  131  131 
LCS_GDT     D      16     D      16      6    7  132     6    7   15   29   45   79   91  101  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      17     K      17      6   54  132     8   20   40   61   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L      18     L      18      6   54  132     6    7   24   40   53   65   85   95  105  112  115  120  121  124  127  129  130  131  131  131 
LCS_GDT     L      19     L      19      6   54  132     8   20   47   64   80   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S      20     S      20     16   54  132     3   23   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     H      21     H      21     16   54  132     5   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     R      22     R      22     16   54  132     9   16   36   67   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D      23     D      23     16   54  132     9   17   46   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     G      24     G      24     16   54  132     9   17   50   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L      25     L      25     16   54  132     9   18   46   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      26     E      26     16   54  132     9   23   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A      27     A      27     16   54  132     9   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      28     F      28     16   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      29     T      29     16   54  132     9   32   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     R      30     R      30     16   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      31     F      31     16   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L      32     L      32     16   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      33     K      33     16   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      34     T      34     16   54  132     8   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      35     E      35     16   54  132     9   27   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      36     F      36     10   54  132     6    9   25   39   70   88  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S      37     S      37     15   54  132     6   13   31   66   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      38     E      38     15   54  132     7   25   50   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      39     E      39     15   54  132     6   19   39   69   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     N      40     N      40     15   54  132     7   25   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      41     I      41     15   54  132     7   19   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      42     E      42     15   54  132     7   19   42   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      43     F      43     15   54  132     8   29   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     W      44     W      44     15   54  132     9   18   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      45     I      45     15   54  132    10   28   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A      46     A      46     15   54  132     9   29   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     C      47     C      47     15   54  132     9   26   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      48     E      48     15   54  132     9   25   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D      49     D      49     15   54  132     9   30   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      50     F      50     15   54  132     9   22   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      51     K      51     15   54  132     9   24   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      52     K      52      5   54  132     3   17   27   36   69   83  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S      53     S      53      5   54  132     6   19   43   66   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      54     K      54      5   54  132     3    5   28   55   77   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     G      55     G      55      5   54  132     3   15   27   46   72   89  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     P      56     P      56     15   54  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q      57     Q      57     15   54  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q      58     Q      58     15   54  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      59     I      59     15   54  132     7   23   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     H      60     H      60     15   54  132     9   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L      61     L      61     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      62     K      62     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A      63     A      63     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      64     K      64     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A      65     A      65     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      66     I      66     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Y      67     Y      67     15   54  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      68     E      68     15   54  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      69     K      69     15   54  132    10   23   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F      70     F      70     15   54  132     9   27   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      71     I      71      4   54  132     0    4    4   33   63   87  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q      72     Q      72      3   54  132     0    3   36   53   74   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      73     T      73      4   53  132     3    4    5   19   49   76   90  103  108  112  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D      74     D      74      4   52  132     3    4    4   26   66   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A      75     A      75      4   48  132     3    8   17   38   63   88  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     P      76     P      76      4   15  132     3    4    8   18   37   48   67   80  102  108  114  117  120  124  127  129  130  131  131  131 
LCS_GDT     K      77     K      77      4   15  132     3    4    4    9   14   16   18   38   46   57   70  101  113  124  127  129  130  131  131  131 
LCS_GDT     E      78     E      78      5   15  132     3    4    6    9   11   20   29   33   46   67   84  106  114  123  127  129  130  131  131  131 
LCS_GDT     V      79     V      79      6   16  132     3    5    8   12   16   22   31   43   62   73  108  115  121  124  127  129  130  131  131  131 
LCS_GDT     N      80     N      80      6   16  132     3    5    8   12   16   22   31   45   59   68   79  106  119  124  127  129  130  131  131  131 
LCS_GDT     L      81     L      81      6   17  132     3    5    8   12   16   22   38   55   63   78  109  115  121  124  127  129  130  131  131  131 
LCS_GDT     D      82     D      82      6   20  132     3    5    8   12   18   36   51   61   72   95  111  115  121  124  127  129  130  131  131  131 
LCS_GDT     F      83     F      83     13   34  132    10   21   40   53   69   91  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     H      84     H      84     13   34  132    10   21   40   53   74   91  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      85     T      85     13   34  132    10   22   40   60   79   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K      86     K      86     13   37  132    10   21   40   61   81   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E      87     E      87     13   37  132    10   22   40   60   78   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     V      88     V      88     13   37  132    10   23   49   69   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      89     I      89     13   37  132    10   27   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      90     T      90     13   37  132    10   22   49   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     N      91     N      91     13   37  132    10   24   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S      92     S      92     13   37  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I      93     I      93     13   37  132     9   22   49   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      94     T      94     13   37  132     3   16   40   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q      95     Q      95     13   37  132     3   17   47   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     P      96     P      96      4   37  132     3    3   16   49   80   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T      97     T      97      4   37  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L      98     L      98      3   37  132     3    7   16   29   46   68   98  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     H      99     H      99      4   37  132     4    4    4   10   20   35   54   85   95  113  116  119  121  124  127  129  130  131  131  131 
LCS_GDT     S     100     S     100     15   37  132     4    9   21   35   58   88  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F     101     F     101     17   37  132     8   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D     102     D     102     17   37  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A     103     A     103     17   37  132    11   31   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     A     104     A     104     17   37  132    11   31   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q     105     Q     105     17   37  132    10   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S     106     S     106     17   37  132    11   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     R     107     R     107     17   37  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     V     108     V     108     17   37  132    13   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Y     109     Y     109     17   37  132    11   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q     110     Q     110     17   37  132    11   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L     111     L     111     17   37  132    11   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     M     112     M     112     17   37  132    11   25   51   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E     113     E     113     17   37  132    11   23   51   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Q     114     Q     114     17   37  132    11   33   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D     115     D     115     17   37  132     4   14   51   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S     116     S     116     17   37  132     4   25   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Y     117     Y     117     17   37  132     6   24   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     T     118     T     118     15   37  132     6   26   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     R     119     R     119     15   37  132     6   26   53   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     F     120     F     120     15   37  132     6   26   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L     121     L     121     15   37  132    11   33   54   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     K     122     K     122     15   37  132     6   18   51   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     S     123     S     123     15   32  132     3   11   17   58   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D     124     D     124     15   32  132     3    9   32   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     I     125     I     125     15   32  132     5   11   17   32   74   87  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     Y     126     Y     126     15   32  132     5   11   20   56   81   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L     127     L     127     15   32  132     5   14   45   71   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     D     128     D     128     15   32  132     5   11   17   38   75   87  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     L     129     L     129     15   32  132     5   10   19   38   65   84   94  105  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     M     130     M     130     15   32  132     5   15   50   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     E     131     E     131     15   32  132     3   11   46   70   82   92  100  106  111  113  116  120  121  124  127  129  130  131  131  131 
LCS_GDT     G     132     G     132      3   32  132     1    6   15   22   42   63   79   93  104  111  115  120  121  124  127  129  130  131  131  131 
LCS_AVERAGE  LCS_A:  46.67  (   9.50   30.50  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     13     33     54     71     82     92    100    106    111    113    116    120    121    124    127    129    130    131    131    131 
GDT PERCENT_CA   9.85  25.00  40.91  53.79  62.12  69.70  75.76  80.30  84.09  85.61  87.88  90.91  91.67  93.94  96.21  97.73  98.48  99.24  99.24  99.24
GDT RMS_LOCAL    0.33   0.71   1.05   1.28   1.48   1.69   1.93   2.13   2.29   2.36   2.51   2.73   2.77   2.97   3.18   3.35   3.46   3.52   3.52   3.52
GDT RMS_ALL_CA   3.85   3.86   3.75   3.75   3.74   3.73   3.72   3.70   3.70   3.70   3.70   3.71   3.70   3.71   3.68   3.68   3.69   3.68   3.68   3.68

#      Molecule1      Molecule2       DISTANCE
LGA    S       1      S       1         12.760
LGA    M       2      M       2          8.227
LGA    V       3      V       3          7.442
LGA    S       4      S       4          6.147
LGA    P       5      P       5          4.618
LGA    E       6      E       6          5.709
LGA    E       7      E       7          6.346
LGA    A       8      A       8          4.457
LGA    V       9      V       9          2.019
LGA    K      10      K      10          2.469
LGA    W      11      W      11          5.783
LGA    G      12      G      12          6.745
LGA    E      13      E      13          5.193
LGA    S      14      S      14          5.395
LGA    F      15      F      15          7.817
LGA    D      16      D      16          5.073
LGA    K      17      K      17          2.093
LGA    L      18      L      18          5.574
LGA    L      19      L      19          2.764
LGA    S      20      S      20          2.629
LGA    H      21      H      21          2.183
LGA    R      22      R      22          3.236
LGA    D      23      D      23          2.650
LGA    G      24      G      24          2.355
LGA    L      25      L      25          2.627
LGA    E      26      E      26          1.980
LGA    A      27      A      27          1.380
LGA    F      28      F      28          1.549
LGA    T      29      T      29          1.837
LGA    R      30      R      30          1.177
LGA    F      31      F      31          1.163
LGA    L      32      L      32          1.351
LGA    K      33      K      33          0.713
LGA    T      34      T      34          0.694
LGA    E      35      E      35          1.480
LGA    F      36      F      36          3.899
LGA    S      37      S      37          2.653
LGA    E      38      E      38          1.578
LGA    E      39      E      39          2.316
LGA    N      40      N      40          1.003
LGA    I      41      I      41          1.179
LGA    E      42      E      42          1.780
LGA    F      43      F      43          0.567
LGA    W      44      W      44          1.300
LGA    I      45      I      45          0.902
LGA    A      46      A      46          0.249
LGA    C      47      C      47          1.031
LGA    E      48      E      48          1.409
LGA    D      49      D      49          0.406
LGA    F      50      F      50          1.265
LGA    K      51      K      51          1.551
LGA    K      52      K      52          3.976
LGA    S      53      S      53          2.037
LGA    K      54      K      54          2.664
LGA    G      55      G      55          3.741
LGA    P      56      P      56          2.121
LGA    Q      57      Q      57          1.315
LGA    Q      58      Q      58          1.806
LGA    I      59      I      59          2.299
LGA    H      60      H      60          1.745
LGA    L      61      L      61          0.902
LGA    K      62      K      62          1.106
LGA    A      63      A      63          1.220
LGA    K      64      K      64          1.252
LGA    A      65      A      65          0.880
LGA    I      66      I      66          1.299
LGA    Y      67      Y      67          0.839
LGA    E      68      E      68          1.432
LGA    K      69      K      69          1.811
LGA    F      70      F      70          1.284
LGA    I      71      I      71          3.472
LGA    Q      72      Q      72          3.207
LGA    T      73      T      73          5.834
LGA    D      74      D      74          3.019
LGA    A      75      A      75          3.914
LGA    P      76      P      76          8.083
LGA    K      77      K      77         10.151
LGA    E      78      E      78          9.373
LGA    V      79      V      79          7.635
LGA    N      80      N      80          8.413
LGA    L      81      L      81          6.854
LGA    D      82      D      82          7.111
LGA    F      83      F      83          3.457
LGA    H      84      H      84          3.490
LGA    T      85      T      85          2.553
LGA    K      86      K      86          2.328
LGA    E      87      E      87          2.963
LGA    V      88      V      88          1.802
LGA    I      89      I      89          1.216
LGA    T      90      T      90          2.206
LGA    N      91      N      91          2.354
LGA    S      92      S      92          1.888
LGA    I      93      I      93          2.020
LGA    T      94      T      94          3.415
LGA    Q      95      Q      95          2.783
LGA    P      96      P      96          3.136
LGA    T      97      T      97          2.003
LGA    L      98      L      98          3.963
LGA    H      99      H      99          5.531
LGA    S     100      S     100          3.250
LGA    F     101      F     101          1.182
LGA    D     102      D     102          0.675
LGA    A     103      A     103          0.766
LGA    A     104      A     104          0.928
LGA    Q     105      Q     105          0.893
LGA    S     106      S     106          1.477
LGA    R     107      R     107          1.178
LGA    V     108      V     108          1.297
LGA    Y     109      Y     109          1.512
LGA    Q     110      Q     110          1.887
LGA    L     111      L     111          1.840
LGA    M     112      M     112          2.282
LGA    E     113      E     113          2.511
LGA    Q     114      Q     114          2.256
LGA    D     115      D     115          2.503
LGA    S     116      S     116          1.049
LGA    Y     117      Y     117          1.320
LGA    T     118      T     118          1.476
LGA    R     119      R     119          1.678
LGA    F     120      F     120          1.668
LGA    L     121      L     121          1.166
LGA    K     122      K     122          2.206
LGA    S     123      S     123          2.827
LGA    D     124      D     124          2.304
LGA    I     125      I     125          3.799
LGA    Y     126      Y     126          3.105
LGA    L     127      L     127          2.168
LGA    D     128      D     128          3.787
LGA    L     129      L     129          4.431
LGA    M     130      M     130          2.675
LGA    E     131      E     131          2.537
LGA    G     132      G     132          7.585

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  132  132    4.0    106    2.13    64.205    59.518     4.763

LGA_LOCAL      RMSD =  2.126  Number of atoms =  106  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.714  Number of atoms =  132 
Std_ALL_ATOMS  RMSD =  3.677  (standard rmsd on all 132 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.196728 * X  +   0.257901 * Y  +  -0.945931 * Z  + 123.423706
  Y_new =   0.332636 * X  +   0.925120 * Y  +   0.183048 * Z  +  -3.783102
  Z_new =   0.922308 * X  +  -0.278640 * Y  +  -0.267784 * Z  +   0.368372 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.336330    0.805263  [ DEG:  -133.8618     46.1382 ]
  Theta =  -1.174010   -1.967582  [ DEG:   -67.2658   -112.7342 ]
  Phi   =   2.104884   -1.036709  [ DEG:   120.6010    -59.3990 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0302TS168_3                                  
REMARK     2: T0302.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0302TS168_3.T0302.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  132  132   4.0  106   2.13  59.518     3.68
REMARK  ---------------------------------------------------------- 
MOLECULE T0302TS168_3
PFRMAT TS
TARGET T0302
MODEL 3
PARENT N/A
ATOM      1  CA  SER     1     150.237   6.621   3.691  1.00 25.00           C
ATOM      2  CA  MET     2     147.992   9.705   3.598  1.00 25.00           C
ATOM      3  CA  VAL     3     145.351  12.220   2.698  1.00 25.00           C
ATOM      4  CA  SER     4     145.234  13.914  -0.665  1.00 25.00           C
ATOM      5  CA  PRO     5     142.567  15.238  -3.036  1.00 25.00           C
ATOM      6  CA  GLU     6     141.289  14.288  -6.519  1.00 25.00           C
ATOM      7  CA  GLU     7     143.399  11.093  -6.449  1.00 25.00           C
ATOM      8  CA  ALA     8     142.001  10.217  -2.992  1.00 25.00           C
ATOM      9  CA  VAL     9     138.433  10.780  -4.265  1.00 25.00           C
ATOM     10  CA  LYS    10     139.126   8.524  -7.282  1.00 25.00           C
ATOM     11  CA  TRP    11     140.510   5.808  -4.963  1.00 25.00           C
ATOM     12  CA  GLY    12     137.392   6.071  -2.754  1.00 25.00           C
ATOM     13  CA  GLU    13     135.148   5.760  -5.842  1.00 25.00           C
ATOM     14  CA  SER    14     137.101   2.670  -6.980  1.00 25.00           C
ATOM     15  CA  PHE    15     136.724   1.118  -3.499  1.00 25.00           C
ATOM     16  CA  ASP    16     132.957   1.812  -3.571  1.00 25.00           C
ATOM     17  CA  LYS    17     132.699   0.186  -7.030  1.00 25.00           C
ATOM     18  CA  LEU    18     134.611  -2.879  -5.759  1.00 25.00           C
ATOM     19  CA  LEU    19     132.262  -3.124  -2.744  1.00 25.00           C
ATOM     20  CA  SER    20     134.556  -3.458   0.273  1.00 25.00           C
ATOM     21  CA  HIS    21     137.780  -1.646   0.927  1.00 25.00           C
ATOM     22  CA  ARG    22     138.340  -0.228   4.458  1.00 25.00           C
ATOM     23  CA  ASP    23     137.961   3.509   5.201  1.00 25.00           C
ATOM     24  CA  GLY    24     135.641   3.899   2.178  1.00 25.00           C
ATOM     25  CA  LEU    25     133.541   0.929   3.376  1.00 25.00           C
ATOM     26  CA  GLU    26     133.305   2.473   6.873  1.00 25.00           C
ATOM     27  CA  ALA    27     132.202   5.810   5.350  1.00 25.00           C
ATOM     28  CA  PHE    28     129.537   4.009   3.274  1.00 25.00           C
ATOM     29  CA  THR    29     128.281   2.201   6.407  1.00 25.00           C
ATOM     30  CA  ARG    30     128.098   5.533   8.286  1.00 25.00           C
ATOM     31  CA  PHE    31     126.132   7.086   5.390  1.00 25.00           C
ATOM     32  CA  LEU    32     123.713   4.118   5.407  1.00 25.00           C
ATOM     33  CA  LYS    33     123.235   4.498   9.188  1.00 25.00           C
ATOM     34  CA  THR    34     122.535   8.238   8.748  1.00 25.00           C
ATOM     35  CA  GLU    35     118.800   7.397   8.828  1.00 25.00           C
ATOM     36  CA  PHE    36     117.581   6.454   5.302  1.00 25.00           C
ATOM     37  CA  SER    37     118.088   3.482   3.030  1.00 25.00           C
ATOM     38  CA  GLU    38     119.872   1.203   5.584  1.00 25.00           C
ATOM     39  CA  GLU    39     117.393  -1.677   5.100  1.00 25.00           C
ATOM     40  CA  ASN    40     118.926  -2.454   1.678  1.00 25.00           C
ATOM     41  CA  ILE    41     122.431  -2.460   3.223  1.00 25.00           C
ATOM     42  CA  GLU    42     121.239  -4.835   5.979  1.00 25.00           C
ATOM     43  CA  PHE    43     119.707  -7.159   3.350  1.00 25.00           C
ATOM     44  CA  TRP    44     122.989  -7.132   1.377  1.00 25.00           C
ATOM     45  CA  ILE    45     124.939  -7.972   4.564  1.00 25.00           C
ATOM     46  CA  ALA    46     122.538 -10.862   5.301  1.00 25.00           C
ATOM     47  CA  CYS    47     122.980 -12.173   1.729  1.00 25.00           C
ATOM     48  CA  GLU    48     126.787 -11.982   2.105  1.00 25.00           C
ATOM     49  CA  ASP    49     126.581 -13.892   5.417  1.00 25.00           C
ATOM     50  CA  PHE    50     124.403 -16.574   3.764  1.00 25.00           C
ATOM     51  CA  LYS    51     126.924 -16.888   0.897  1.00 25.00           C
ATOM     52  CA  LYS    52     128.140 -20.521   1.063  1.00 25.00           C
ATOM     53  CA  SER    53     126.598 -22.302   3.978  1.00 25.00           C
ATOM     54  CA  LYS    54     125.330 -25.569   2.392  1.00 25.00           C
ATOM     55  CA  GLY    55     124.717 -29.105   3.653  1.00 25.00           C
ATOM     56  CA  PRO    56     121.666 -27.903   5.583  1.00 25.00           C
ATOM     57  CA  GLN    57     118.850 -27.255   8.095  1.00 25.00           C
ATOM     58  CA  GLN    58     120.788 -24.284   9.539  1.00 25.00           C
ATOM     59  CA  ILE    59     121.310 -22.881   6.014  1.00 25.00           C
ATOM     60  CA  HIS    60     117.569 -23.256   5.284  1.00 25.00           C
ATOM     61  CA  LEU    61     116.725 -21.445   8.551  1.00 25.00           C
ATOM     62  CA  LYS    62     119.138 -18.615   7.636  1.00 25.00           C
ATOM     63  CA  ALA    63     117.523 -18.325   4.176  1.00 25.00           C
ATOM     64  CA  LYS    64     114.050 -18.172   5.781  1.00 25.00           C
ATOM     65  CA  ALA    65     115.249 -15.432   8.174  1.00 25.00           C
ATOM     66  CA  ILE    66     116.685 -13.453   5.225  1.00 25.00           C
ATOM     67  CA  TYR    67     113.365 -13.797   3.346  1.00 25.00           C
ATOM     68  CA  GLU    68     111.462 -12.573   6.435  1.00 25.00           C
ATOM     69  CA  LYS    69     113.821  -9.571   6.731  1.00 25.00           C
ATOM     70  CA  PHE    70     113.284  -8.754   3.028  1.00 25.00           C
ATOM     71  CA  ILE    71     109.491  -8.956   3.508  1.00 25.00           C
ATOM     72  CA  GLN    72     106.644 -11.177   4.507  1.00 25.00           C
ATOM     73  CA  THR    73     105.424  -8.764   7.157  1.00 25.00           C
ATOM     74  CA  ASP    74     103.078  -5.742   7.354  1.00 25.00           C
ATOM     75  CA  ALA    75     106.124  -3.672   6.335  1.00 25.00           C
ATOM     76  CA  PRO    76     104.993  -0.053   5.598  1.00 25.00           C
ATOM     77  CA  LYS    77     103.138  -1.240   2.486  1.00 25.00           C
ATOM     78  CA  GLU    78     104.074   0.947  -0.485  1.00 25.00           C
ATOM     79  CA  VAL    79     106.208  -1.539  -2.375  1.00 25.00           C
ATOM     80  CA  ASN    80     104.370  -0.884  -5.658  1.00 25.00           C
ATOM     81  CA  LEU    81     106.982  -3.208  -7.119  1.00 25.00           C
ATOM     82  CA  ASP    82     105.037  -5.898  -9.010  1.00 25.00           C
ATOM     83  CA  PHE    83     106.001  -9.280  -7.438  1.00 25.00           C
ATOM     84  CA  HIS    84     107.317 -12.071  -9.705  1.00 25.00           C
ATOM     85  CA  THR    85     110.674 -12.018  -7.862  1.00 25.00           C
ATOM     86  CA  LYS    86     108.858 -12.233  -4.497  1.00 25.00           C
ATOM     87  CA  GLU    87     106.798 -15.200  -5.771  1.00 25.00           C
ATOM     88  CA  VAL    88     109.996 -16.943  -6.956  1.00 25.00           C
ATOM     89  CA  ILE    89     111.611 -16.360  -3.532  1.00 25.00           C
ATOM     90  CA  THR    90     108.519 -17.808  -1.798  1.00 25.00           C
ATOM     91  CA  ASN    91     108.643 -20.877  -4.085  1.00 25.00           C
ATOM     92  CA  SER    92     112.359 -21.351  -3.286  1.00 25.00           C
ATOM     93  CA  ILE    93     111.610 -21.107   0.461  1.00 25.00           C
ATOM     94  CA  THR    94     112.530 -24.495   2.015  1.00 25.00           C
ATOM     95  CA  GLN    95     114.364 -26.630  -0.558  1.00 25.00           C
ATOM     96  CA  PRO    96     117.655 -24.738  -1.155  1.00 25.00           C
ATOM     97  CA  THR    97     121.133 -23.209  -1.350  1.00 25.00           C
ATOM     98  CA  LEU    98     120.147 -20.142  -3.385  1.00 25.00           C
ATOM     99  CA  HIS    99     119.529 -18.256  -6.598  1.00 25.00           C
ATOM    100  CA  SER   100     116.655 -15.949  -5.558  1.00 25.00           C
ATOM    101  CA  PHE   101     118.739 -14.630  -2.629  1.00 25.00           C
ATOM    102  CA  ASP   102     121.687 -13.979  -4.987  1.00 25.00           C
ATOM    103  CA  ALA   103     119.374 -12.107  -7.399  1.00 25.00           C
ATOM    104  CA  ALA   104     118.026  -9.992  -4.505  1.00 25.00           C
ATOM    105  CA  GLN   105     121.603  -9.181  -3.399  1.00 25.00           C
ATOM    106  CA  SER   106     122.504  -8.162  -6.979  1.00 25.00           C
ATOM    107  CA  ARG   107     119.411  -5.910  -7.142  1.00 25.00           C
ATOM    108  CA  VAL   108     120.379  -4.296  -3.806  1.00 25.00           C
ATOM    109  CA  TYR   109     123.932  -3.692  -5.103  1.00 25.00           C
ATOM    110  CA  GLN   110     122.526  -2.099  -8.289  1.00 25.00           C
ATOM    111  CA  LEU   111     120.257   0.161  -6.188  1.00 25.00           C
ATOM    112  CA  MET   112     123.248   1.200  -4.033  1.00 25.00           C
ATOM    113  CA  GLU   113     125.273   1.996  -7.184  1.00 25.00           C
ATOM    114  CA  GLN   114     122.375   4.097  -8.545  1.00 25.00           C
ATOM    115  CA  ASP   115     120.454   6.824  -6.806  1.00 25.00           C
ATOM    116  CA  SER   116     121.311   7.240  -3.137  1.00 25.00           C
ATOM    117  CA  TYR   117     125.060   7.642  -3.175  1.00 25.00           C
ATOM    118  CA  THR   118     125.357  10.779  -5.351  1.00 25.00           C
ATOM    119  CA  ARG   119     124.801  12.994  -2.277  1.00 25.00           C
ATOM    120  CA  PHE   120     127.499  11.062  -0.366  1.00 25.00           C
ATOM    121  CA  LEU   121     129.921  11.493  -3.301  1.00 25.00           C
ATOM    122  CA  LYS   122     129.587  15.321  -3.369  1.00 25.00           C
ATOM    123  CA  SER   123     128.190  16.472   0.015  1.00 25.00           C
ATOM    124  CA  ASP   124     128.968  17.710   3.526  1.00 25.00           C
ATOM    125  CA  ILE   125     131.085  15.614   5.933  1.00 25.00           C
ATOM    126  CA  TYR   126     132.691  13.793   2.970  1.00 25.00           C
ATOM    127  CA  LEU   127     133.469  17.148   1.297  1.00 25.00           C
ATOM    128  CA  ASP   128     135.044  18.431   4.544  1.00 25.00           C
ATOM    129  CA  LEU   129     137.172  15.256   4.794  1.00 25.00           C
ATOM    130  CA  MET   130     138.310  15.704   1.164  1.00 25.00           C
ATOM    131  CA  GLU   131     140.539  18.551   2.428  1.00 25.00           C
ATOM    132  CA  GLY   132     142.558  19.319   5.543  1.00 25.00           C
TER
END
