
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  132 (  132),  selected  132 , name T0302TS168_4
# Molecule2: number of CA atoms  132 ( 2145),  selected  132 , name T0302.pdb
# PARAMETERS: T0302TS168_4.T0302.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   132         1 - 132         3.60     3.60
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    54        17 - 70          1.97     3.76
  LONGEST_CONTINUOUS_SEGMENT:    54        19 - 72          1.92     3.74
  LONGEST_CONTINUOUS_SEGMENT:    54        20 - 73          1.95     3.80
  LCS_AVERAGE:     30.38

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    24        46 - 69          1.00     4.40
  LCS_AVERAGE:     10.88

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  132
LCS_GDT     S       1     S       1      4    6  132     0    3    4    8   10   11   15   18   25   49   60   68  116  123  125  126  129  131  132  132 
LCS_GDT     M       2     M       2      4    6  132     0    3    4   10   17   35   75  101  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     V       3     V       3      4    6  132     2    5   17   48   72   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S       4     S       4      4   12  132     0    5   17   50   72   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     P       5     P       5     11   12  132     7   10   17   48   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E       6     E       6     11   12  132     7   10   10   11   31   55   85   95  105  113  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E       7     E       7     11   12  132     7   10   10   11   11   20   26   29   41   97  113  121  122  125  127  131  131  131  132  132 
LCS_GDT     A       8     A       8     11   12  132     7   10   10   11   11   67   95  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     V       9     V       9     11   12  132     7   12   23   44   63   87   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      10     K      10     11   12  132     7   10   17   42   60   82   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     W      11     W      11     11   12  132     7   10   10   11   23   32   79  104  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     G      12     G      12     11   12  132     4   10   19   26   34   45   65   75  101  106  114  119  122  125  127  131  131  131  132  132 
LCS_GDT     E      13     E      13     11   12  132     4   10   10   11   26   36   59   85  101  110  115  121  122  125  127  131  131  131  132  132 
LCS_GDT     S      14     S      14     11   12  132     6   11   31   44   72   88   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      15     F      15     11   12  132     6    6    7   11   11   32   42   93  101  106  116  121  122  125  127  131  131  131  132  132 
LCS_GDT     D      16     D      16      6    7  132     6    6   18   30   44   76   97  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      17     K      17      6   54  132     6   11   19   33   63   80   91  103  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L      18     L      18      6   54  132     6   11   32   49   62   75   85   92  101  104  114  117  121  125  127  131  131  131  132  132 
LCS_GDT     L      19     L      19      6   54  132     6   20   43   56   67   78   88   97  107  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S      20     S      20     16   54  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     H      21     H      21     16   54  132     3   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     R      22     R      22     17   54  132     9   25   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     D      23     D      23     17   54  132     9   26   49   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     G      24     G      24     17   54  132     9   14   34   60   74   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L      25     L      25     17   54  132     9   14   49   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      26     E      26     17   54  132     9   27   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A      27     A      27     17   54  132     9   14   30   58   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      28     F      28     17   54  132     9   21   45   64   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      29     T      29     17   54  132     6   32   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     R      30     R      30     17   54  132     9   14   19   53   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      31     F      31     17   54  132     9   14   42   58   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L      32     L      32     17   54  132     9   32   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      33     K      33     17   54  132     6   14   44   64   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      34     T      34     17   54  132     5   14   32   62   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      35     E      35     17   54  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      36     F      36     17   54  132     8   19   36   57   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S      37     S      37     17   54  132     3   16   36   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      38     E      38     17   54  132     8   24   38   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      39     E      39     16   54  132     8   19   35   57   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     N      40     N      40     16   54  132     8   25   45   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      41     I      41     16   54  132     9   25   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      42     E      42     16   54  132     8   20   45   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      43     F      43     16   54  132     9   32   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     W      44     W      44     16   54  132     8   28   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      45     I      45     16   54  132     8   32   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A      46     A      46     24   54  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     C      47     C      47     24   54  132     8   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      48     E      48     24   54  132     8   28   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     D      49     D      49     24   54  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      50     F      50     24   54  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      51     K      51     24   54  132     8   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      52     K      52     24   54  132     7   27   46   63   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S      53     S      53     24   54  132     9   18   41   56   73   87   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      54     K      54     24   54  132     4   15   24   49   71   87   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     G      55     G      55     24   54  132     7   25   47   64   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     P      56     P      56     24   54  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q      57     Q      57     24   54  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q      58     Q      58     24   54  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      59     I      59     24   54  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     H      60     H      60     24   54  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L      61     L      61     24   54  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      62     K      62     24   54  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A      63     A      63     24   54  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      64     K      64     24   54  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A      65     A      65     24   54  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      66     I      66     24   54  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Y      67     Y      67     24   54  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      68     E      68     24   54  132    10   29   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      69     K      69     24   54  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F      70     F      70     22   54  132     9   32   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      71     I      71      4   54  132     0    4    4   11   15   32   82   94  105  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q      72     Q      72      3   54  132     0    3   20   31   58   80   90  101  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      73     T      73      5   54  132     3    5   15   25   32   66   79   94  102  112  116  121  122  125  127  131  131  131  132  132 
LCS_GDT     D      74     D      74      5   50  132     3   13   30   49   65   79   87   96  108  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A      75     A      75      5   47  132     3    5    6   11   34   79   97  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     P      76     P      76      5   19  132     3    5   13   22   38   50   71   94  103  110  115  119  121  125  127  131  131  131  132  132 
LCS_GDT     K      77     K      77      5   19  132     3    5   12   15   16   17   33   56   74   94  110  116  121  125  127  131  131  131  132  132 
LCS_GDT     E      78     E      78      4   19  132     3    3    4    5   18   24   30   40   48   58   69   89  116  125  126  131  131  131  132  132 
LCS_GDT     V      79     V      79      4   19  132     3    4   12   15   16   18   28   40   58   73   92  114  121  125  127  131  131  131  132  132 
LCS_GDT     N      80     N      80      4   19  132     3    7   12   15   16   18   28   42   60   66   76   94  111  120  125  131  131  131  132  132 
LCS_GDT     L      81     L      81      4   19  132     3    7   12   15   16   26   44   59   65   88  103  114  121  125  127  131  131  131  132  132 
LCS_GDT     D      82     D      82      4   19  132     3    4    6   11   15   28   44   57   65   85   98  106  116  122  126  131  131  131  132  132 
LCS_GDT     F      83     F      83     12   38  132    10   11   36   60   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     H      84     H      84     12   38  132    10   24   38   60   76   88   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      85     T      85     12   38  132    10   24   47   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K      86     K      86     12   38  132    10   18   47   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E      87     E      87     12   38  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     V      88     V      88     12   38  132    12   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      89     I      89     12   38  132    10   25   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      90     T      90     12   38  132    10   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     N      91     N      91     12   38  132    10   19   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S      92     S      92     12   38  132    10   11   29   41   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I      93     I      93     12   38  132     4   16   39   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      94     T      94     12   38  132     3   24   49   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q      95     Q      95      6   38  132     3   20   41   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     P      96     P      96      6   38  132     3   27   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T      97     T      97      6   38  132     3   25   45   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L      98     L      98      6   38  132     3    8   22   39   65   85   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     H      99     H      99      6   38  132     4    5    6   15   25   36   67   94  107  112  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S     100     S     100     15   38  132     4    7   19   41   72   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F     101     F     101     17   38  132     4   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     D     102     D     102     18   38  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A     103     A     103     18   38  132    12   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     A     104     A     104     18   38  132    12   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q     105     Q     105     18   38  132    11   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S     106     S     106     18   38  132    12   28   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     R     107     R     107     18   38  132    12   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     V     108     V     108     18   38  132    12   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Y     109     Y     109     18   38  132    12   28   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q     110     Q     110     18   38  132    12   28   49   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L     111     L     111     18   38  132    12   28   49   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     M     112     M     112     18   38  132    12   28   44   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E     113     E     113     18   38  132    12   28   44   65   76   88   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Q     114     Q     114     18   38  132    12   28   46   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     D     115     D     115     18   38  132     4   18   43   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S     116     S     116     18   38  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Y     117     Y     117     18   38  132     4   32   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     T     118     T     118     18   38  132     3   11   26   59   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     R     119     R     119     18   38  132     9   33   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     F     120     F     120      9   38  132     3   22   45   63   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L     121     L     121      9   32  132     4    9   26   57   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     K     122     K     122     10   32  132    10   31   51   65   76   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     S     123     S     123     10   32  132     4    5    7   37   56   81   95  105  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     D     124     D     124     10   32  132     3   10   16   56   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     I     125     I     125     10   32  132     5   10   16   30   61   83   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     Y     126     Y     126     10   32  132     5   10   31   58   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L     127     L     127     10   32  132     5   10   35   60   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     D     128     D     128     10   32  132     5   10   16   30   61   77   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     L     129     L     129     10   32  132     5   10   16   26   41   70   87   97  108  113  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     M     130     M     130     10   32  132     5   11   21   37   59   79   95  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     E     131     E     131     10   32  132     4   10   31   57   73   89   99  106  109  114  117  121  122  125  127  131  131  131  132  132 
LCS_GDT     G     132     G     132      3   20  132     3   11   18   28   42   53   72   88  102  111  116  121  122  125  127  131  131  131  132  132 
LCS_AVERAGE  LCS_A:  47.08  (  10.88   30.38  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     12     33     51     65     76     89     99    106    109    114    117    121    122    125    127    131    131    131    132    132 
GDT PERCENT_CA   9.09  25.00  38.64  49.24  57.58  67.42  75.00  80.30  82.58  86.36  88.64  91.67  92.42  94.70  96.21  99.24  99.24  99.24 100.00 100.00
GDT RMS_LOCAL    0.30   0.73   0.97   1.25   1.49   1.86   2.07   2.26   2.35   2.54   2.67   2.86   2.91   3.08   3.21   3.53   3.53   3.53   3.60   3.60
GDT RMS_ALL_CA   4.94   4.05   3.89   3.99   3.89   3.66   3.64   3.62   3.63   3.63   3.62   3.63   3.63   3.62   3.61   3.61   3.61   3.61   3.60   3.60

#      Molecule1      Molecule2       DISTANCE
LGA    S       1      S       1          8.851
LGA    M       2      M       2          4.449
LGA    V       3      V       3          2.671
LGA    S       4      S       4          3.015
LGA    P       5      P       5          2.519
LGA    E       6      E       6          5.539
LGA    E       7      E       7          6.111
LGA    A       8      A       8          3.943
LGA    V       9      V       9          3.604
LGA    K      10      K      10          3.252
LGA    W      11      W      11          4.576
LGA    G      12      G      12          6.960
LGA    E      13      E      13          5.888
LGA    S      14      S      14          3.012
LGA    F      15      F      15          6.224
LGA    D      16      D      16          3.618
LGA    K      17      K      17          4.633
LGA    L      18      L      18          7.160
LGA    L      19      L      19          5.420
LGA    S      20      S      20          1.539
LGA    H      21      H      21          1.668
LGA    R      22      R      22          1.777
LGA    D      23      D      23          0.734
LGA    G      24      G      24          1.814
LGA    L      25      L      25          1.541
LGA    E      26      E      26          1.418
LGA    A      27      A      27          2.006
LGA    F      28      F      28          0.785
LGA    T      29      T      29          1.170
LGA    R      30      R      30          2.505
LGA    F      31      F      31          1.978
LGA    L      32      L      32          0.268
LGA    K      33      K      33          1.921
LGA    T      34      T      34          2.006
LGA    E      35      E      35          1.162
LGA    F      36      F      36          3.689
LGA    S      37      S      37          3.404
LGA    E      38      E      38          2.803
LGA    E      39      E      39          2.946
LGA    N      40      N      40          2.195
LGA    I      41      I      41          1.262
LGA    E      42      E      42          1.569
LGA    F      43      F      43          1.121
LGA    W      44      W      44          0.588
LGA    I      45      I      45          0.303
LGA    A      46      A      46          0.569
LGA    C      47      C      47          0.758
LGA    E      48      E      48          0.692
LGA    D      49      D      49          0.412
LGA    F      50      F      50          0.849
LGA    K      51      K      51          0.886
LGA    K      52      K      52          2.288
LGA    S      53      S      53          2.748
LGA    K      54      K      54          2.986
LGA    G      55      G      55          1.346
LGA    P      56      P      56          1.737
LGA    Q      57      Q      57          1.582
LGA    Q      58      Q      58          1.637
LGA    I      59      I      59          1.723
LGA    H      60      H      60          1.486
LGA    L      61      L      61          1.286
LGA    K      62      K      62          0.958
LGA    A      63      A      63          0.936
LGA    K      64      K      64          1.762
LGA    A      65      A      65          1.328
LGA    I      66      I      66          0.805
LGA    Y      67      Y      67          1.111
LGA    E      68      E      68          2.235
LGA    K      69      K      69          1.706
LGA    F      70      F      70          0.896
LGA    I      71      I      71          5.287
LGA    Q      72      Q      72          4.850
LGA    T      73      T      73          6.712
LGA    D      74      D      74          5.728
LGA    A      75      A      75          3.847
LGA    P      76      P      76          6.979
LGA    K      77      K      77          9.016
LGA    E      78      E      78          9.538
LGA    V      79      V      79          7.914
LGA    N      80      N      80          9.121
LGA    L      81      L      81          7.487
LGA    D      82      D      82          8.733
LGA    F      83      F      83          3.251
LGA    H      84      H      84          3.593
LGA    T      85      T      85          2.366
LGA    K      86      K      86          1.625
LGA    E      87      E      87          2.436
LGA    V      88      V      88          1.906
LGA    I      89      I      89          1.150
LGA    T      90      T      90          1.839
LGA    N      91      N      91          2.859
LGA    S      92      S      92          3.191
LGA    I      93      I      93          2.911
LGA    T      94      T      94          2.568
LGA    Q      95      Q      95          3.886
LGA    P      96      P      96          2.128
LGA    T      97      T      97          2.530
LGA    L      98      L      98          3.289
LGA    H      99      H      99          5.461
LGA    S     100      S     100          2.717
LGA    F     101      F     101          2.037
LGA    D     102      D     102          1.612
LGA    A     103      A     103          1.964
LGA    A     104      A     104          1.807
LGA    Q     105      Q     105          1.596
LGA    S     106      S     106          2.530
LGA    R     107      R     107          2.025
LGA    V     108      V     108          1.915
LGA    Y     109      Y     109          2.349
LGA    Q     110      Q     110          3.016
LGA    L     111      L     111          2.577
LGA    M     112      M     112          3.183
LGA    E     113      E     113          3.662
LGA    Q     114      Q     114          3.452
LGA    D     115      D     115          3.578
LGA    S     116      S     116          2.601
LGA    Y     117      Y     117          1.139
LGA    T     118      T     118          2.918
LGA    R     119      R     119          2.526
LGA    F     120      F     120          2.039
LGA    L     121      L     121          2.315
LGA    K     122      K     122          2.655
LGA    S     123      S     123          4.641
LGA    D     124      D     124          3.943
LGA    I     125      I     125          3.790
LGA    Y     126      Y     126          1.934
LGA    L     127      L     127          1.479
LGA    D     128      D     128          3.761
LGA    L     129      L     129          5.010
LGA    M     130      M     130          3.991
LGA    E     131      E     131          2.461
LGA    G     132      G     132          6.373

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  132  132    4.0    106    2.26    63.447    58.618     4.485

LGA_LOCAL      RMSD =  2.263  Number of atoms =  106  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.634  Number of atoms =  132 
Std_ALL_ATOMS  RMSD =  3.604  (standard rmsd on all 132 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.540040 * X  +   0.168518 * Y  +  -0.824596 * Z  + 122.809128
  Y_new =  -0.368796 * X  +  -0.833300 * Y  +  -0.411826 * Z  +  -4.229423
  Z_new =  -0.756536 * X  +   0.526510 * Y  +  -0.387866 * Z  +   0.307881 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   2.205714   -0.935879  [ DEG:   126.3781    -53.6219 ]
  Theta =   0.858000    2.283593  [ DEG:    49.1598    130.8402 ]
  Phi   =  -0.599160    2.542432  [ DEG:   -34.3294    145.6706 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0302TS168_4                                  
REMARK     2: T0302.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0302TS168_4.T0302.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  132  132   4.0  106   2.26  58.618     3.60
REMARK  ---------------------------------------------------------- 
MOLECULE T0302TS168_4
PFRMAT TS
TARGET T0302
MODEL 4
PARENT N/A
ATOM      1  CA  SER     1     147.290   4.104   8.538  1.00 25.00           C
ATOM      2  CA  MET     2     145.830   6.631   6.034  1.00 25.00           C
ATOM      3  CA  VAL     3     142.617   7.606   4.174  1.00 25.00           C
ATOM      4  CA  SER     4     144.122  10.500   2.111  1.00 25.00           C
ATOM      5  CA  PRO     5     143.204  12.843  -0.794  1.00 25.00           C
ATOM      6  CA  GLU     6     140.434  13.843  -3.242  1.00 25.00           C
ATOM      7  CA  GLU     7     141.892  11.491  -5.889  1.00 25.00           C
ATOM      8  CA  ALA     8     142.003   8.642  -3.333  1.00 25.00           C
ATOM      9  CA  VAL     9     138.355   9.318  -2.385  1.00 25.00           C
ATOM     10  CA  LYS    10     137.359   9.266  -6.082  1.00 25.00           C
ATOM     11  CA  TRP    11     139.201   5.943  -6.558  1.00 25.00           C
ATOM     12  CA  GLY    12     137.406   4.482  -3.507  1.00 25.00           C
ATOM     13  CA  GLU    13     134.035   5.646  -4.902  1.00 25.00           C
ATOM     14  CA  SER    14     134.849   4.037  -8.281  1.00 25.00           C
ATOM     15  CA  PHE    15     135.785   0.766  -6.523  1.00 25.00           C
ATOM     16  CA  ASP    16     132.494   0.845  -4.566  1.00 25.00           C
ATOM     17  CA  LYS    17     130.550   1.422  -7.815  1.00 25.00           C
ATOM     18  CA  LEU    18     132.364  -1.524  -9.454  1.00 25.00           C
ATOM     19  CA  LEU    19     131.527  -3.744  -6.448  1.00 25.00           C
ATOM     20  CA  SER    20     133.926  -4.141  -3.485  1.00 25.00           C
ATOM     21  CA  HIS    21     136.578  -1.921  -1.955  1.00 25.00           C
ATOM     22  CA  ARG    22     136.508  -1.320   1.807  1.00 25.00           C
ATOM     23  CA  ASP    23     136.651   1.392   4.507  1.00 25.00           C
ATOM     24  CA  GLY    24     134.831   3.835   2.186  1.00 25.00           C
ATOM     25  CA  LEU    25     132.139   1.201   1.486  1.00 25.00           C
ATOM     26  CA  GLU    26     131.714   0.600   5.243  1.00 25.00           C
ATOM     27  CA  ALA    27     131.373   4.368   5.833  1.00 25.00           C
ATOM     28  CA  PHE    28     128.737   4.587   3.064  1.00 25.00           C
ATOM     29  CA  THR    29     126.813   1.669   4.629  1.00 25.00           C
ATOM     30  CA  ARG    30     126.937   3.390   8.049  1.00 25.00           C
ATOM     31  CA  PHE    31     125.638   6.637   6.489  1.00 25.00           C
ATOM     32  CA  LEU    32     122.785   4.714   4.805  1.00 25.00           C
ATOM     33  CA  LYS    33     121.895   3.061   8.143  1.00 25.00           C
ATOM     34  CA  THR    34     121.876   6.485   9.862  1.00 25.00           C
ATOM     35  CA  GLU    35     119.491   7.749   7.149  1.00 25.00           C
ATOM     36  CA  PHE    36     116.796   5.683   5.446  1.00 25.00           C
ATOM     37  CA  SER    37     117.900   3.737   2.324  1.00 25.00           C
ATOM     38  CA  GLU    38     119.964   0.939   3.901  1.00 25.00           C
ATOM     39  CA  GLU    39     117.438  -1.939   3.948  1.00 25.00           C
ATOM     40  CA  ASN    40     118.758  -3.185   0.575  1.00 25.00           C
ATOM     41  CA  ILE    41     122.348  -3.042   1.900  1.00 25.00           C
ATOM     42  CA  GLU    42     121.304  -5.015   5.012  1.00 25.00           C
ATOM     43  CA  PHE    43     119.599  -7.641   2.806  1.00 25.00           C
ATOM     44  CA  TRP    44     122.758  -7.924   0.659  1.00 25.00           C
ATOM     45  CA  ILE    45     124.889  -8.369   3.810  1.00 25.00           C
ATOM     46  CA  ALA    46     122.512 -11.098   5.062  1.00 25.00           C
ATOM     47  CA  CYS    47     122.730 -12.875   1.676  1.00 25.00           C
ATOM     48  CA  GLU    48     126.554 -12.696   1.800  1.00 25.00           C
ATOM     49  CA  ASP    49     126.531 -14.150   5.342  1.00 25.00           C
ATOM     50  CA  PHE    50     124.238 -16.992   4.188  1.00 25.00           C
ATOM     51  CA  LYS    51     126.579 -17.719   1.245  1.00 25.00           C
ATOM     52  CA  LYS    52     129.363 -19.822   2.755  1.00 25.00           C
ATOM     53  CA  SER    53     126.659 -22.388   3.220  1.00 25.00           C
ATOM     54  CA  LYS    54     125.397 -25.712   1.975  1.00 25.00           C
ATOM     55  CA  GLY    55     124.972 -27.175   5.462  1.00 25.00           C
ATOM     56  CA  PRO    56     121.206 -27.707   5.343  1.00 25.00           C
ATOM     57  CA  GLN    57     119.045 -26.922   8.406  1.00 25.00           C
ATOM     58  CA  GLN    58     121.257 -23.905   9.223  1.00 25.00           C
ATOM     59  CA  ILE    59     120.946 -22.667   5.612  1.00 25.00           C
ATOM     60  CA  HIS    60     117.139 -23.045   5.784  1.00 25.00           C
ATOM     61  CA  LEU    61     117.069 -21.080   9.072  1.00 25.00           C
ATOM     62  CA  LYS    62     119.196 -18.315   7.493  1.00 25.00           C
ATOM     63  CA  ALA    63     116.825 -18.170   4.489  1.00 25.00           C
ATOM     64  CA  LYS    64     113.817 -17.915   6.847  1.00 25.00           C
ATOM     65  CA  ALA    65     115.530 -15.079   8.766  1.00 25.00           C
ATOM     66  CA  ILE    66     116.240 -13.249   5.478  1.00 25.00           C
ATOM     67  CA  TYR    67     112.576 -13.651   4.436  1.00 25.00           C
ATOM     68  CA  GLU    68     111.436 -12.271   7.822  1.00 25.00           C
ATOM     69  CA  LYS    69     113.792  -9.278   7.424  1.00 25.00           C
ATOM     70  CA  PHE    70     112.411  -8.627   3.912  1.00 25.00           C
ATOM     71  CA  ILE    71     108.831  -8.776   5.265  1.00 25.00           C
ATOM     72  CA  GLN    72     106.407 -11.418   6.384  1.00 25.00           C
ATOM     73  CA  THR    73     104.157  -8.681   7.880  1.00 25.00           C
ATOM     74  CA  ASP    74     106.164  -6.794  10.541  1.00 25.00           C
ATOM     75  CA  ALA    75     105.958  -3.952   7.956  1.00 25.00           C
ATOM     76  CA  PRO    76     105.714  -0.530   6.381  1.00 25.00           C
ATOM     77  CA  LYS    77     104.001  -1.674   3.117  1.00 25.00           C
ATOM     78  CA  GLU    78     103.135   0.371  -0.011  1.00 25.00           C
ATOM     79  CA  VAL    79     105.960  -0.978  -2.072  1.00 25.00           C
ATOM     80  CA  ASN    80     103.176  -2.155  -4.453  1.00 25.00           C
ATOM     81  CA  LEU    81     105.706  -4.568  -5.950  1.00 25.00           C
ATOM     82  CA  ASP    82     103.390  -6.730  -8.057  1.00 25.00           C
ATOM     83  CA  PHE    83     106.216  -9.113  -8.658  1.00 25.00           C
ATOM     84  CA  HIS    84     107.441 -12.417 -10.159  1.00 25.00           C
ATOM     85  CA  THR    85     110.841 -11.959  -8.457  1.00 25.00           C
ATOM     86  CA  LYS    86     109.101 -11.272  -5.114  1.00 25.00           C
ATOM     87  CA  GLU    87     106.972 -14.426  -5.546  1.00 25.00           C
ATOM     88  CA  VAL    88     110.117 -16.475  -6.306  1.00 25.00           C
ATOM     89  CA  ILE    89     111.820 -15.067  -3.178  1.00 25.00           C
ATOM     90  CA  THR    90     108.749 -15.965  -1.072  1.00 25.00           C
ATOM     91  CA  ASN    91     108.779 -19.519  -2.500  1.00 25.00           C
ATOM     92  CA  SER    92     112.505 -19.844  -1.677  1.00 25.00           C
ATOM     93  CA  ILE    93     111.848 -18.635   1.896  1.00 25.00           C
ATOM     94  CA  THR    94     110.492 -22.142   2.337  1.00 25.00           C
ATOM     95  CA  GLN    95     112.396 -25.414   1.749  1.00 25.00           C
ATOM     96  CA  PRO    96     115.450 -23.731   0.185  1.00 25.00           C
ATOM     97  CA  THR    97     118.742 -24.297  -1.751  1.00 25.00           C
ATOM     98  CA  LEU    98     120.531 -21.093  -2.785  1.00 25.00           C
ATOM     99  CA  HIS    99     119.015 -19.368  -5.820  1.00 25.00           C
ATOM    100  CA  SER   100     116.223 -16.948  -4.813  1.00 25.00           C
ATOM    101  CA  PHE   101     118.486 -15.415  -2.131  1.00 25.00           C
ATOM    102  CA  ASP   102     121.294 -14.999  -4.702  1.00 25.00           C
ATOM    103  CA  ALA   103     118.858 -13.307  -7.125  1.00 25.00           C
ATOM    104  CA  ALA   104     117.698 -10.941  -4.345  1.00 25.00           C
ATOM    105  CA  GLN   105     121.339 -10.085  -3.521  1.00 25.00           C
ATOM    106  CA  SER   106     122.037  -9.378  -7.220  1.00 25.00           C
ATOM    107  CA  ARG   107     118.956  -7.110  -7.392  1.00 25.00           C
ATOM    108  CA  VAL   108     120.131  -5.236  -4.266  1.00 25.00           C
ATOM    109  CA  TYR   109     123.605  -4.785  -5.812  1.00 25.00           C
ATOM    110  CA  GLN   110     122.026  -3.447  -9.034  1.00 25.00           C
ATOM    111  CA  LEU   111     119.901  -0.993  -7.002  1.00 25.00           C
ATOM    112  CA  MET   112     123.021   0.187  -5.118  1.00 25.00           C
ATOM    113  CA  GLU   113     124.864   0.692  -8.437  1.00 25.00           C
ATOM    114  CA  GLN   114     121.906   2.707  -9.801  1.00 25.00           C
ATOM    115  CA  ASP   115     120.190   5.573  -8.025  1.00 25.00           C
ATOM    116  CA  SER   116     121.666   5.617  -4.503  1.00 25.00           C
ATOM    117  CA  TYR   117     125.451   5.680  -4.363  1.00 25.00           C
ATOM    118  CA  THR   118     127.037   8.614  -6.246  1.00 25.00           C
ATOM    119  CA  ARG   119     124.109  10.871  -5.245  1.00 25.00           C
ATOM    120  CA  PHE   120     124.499   9.797  -1.589  1.00 25.00           C
ATOM    121  CA  LEU   121     128.250  10.556  -1.740  1.00 25.00           C
ATOM    122  CA  LYS   122     128.508  13.225  -4.462  1.00 25.00           C
ATOM    123  CA  SER   123     126.624  16.209  -2.918  1.00 25.00           C
ATOM    124  CA  ASP   124     128.412  17.296   0.300  1.00 25.00           C
ATOM    125  CA  ILE   125     128.950  15.075   3.374  1.00 25.00           C
ATOM    126  CA  TYR   126     131.805  13.251   1.587  1.00 25.00           C
ATOM    127  CA  LEU   127     133.405  16.607   0.667  1.00 25.00           C
ATOM    128  CA  ASP   128     133.124  17.765   4.308  1.00 25.00           C
ATOM    129  CA  LEU   129     134.751  14.509   5.495  1.00 25.00           C
ATOM    130  CA  MET   130     137.597  14.982   2.976  1.00 25.00           C
ATOM    131  CA  GLU   131     137.750  18.780   2.661  1.00 25.00           C
ATOM    132  CA  GLY   132     140.608  18.564   5.230  1.00 25.00           C
TER
END
