
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  132 (  132),  selected  132 , name T0302TS393_1
# Molecule2: number of CA atoms  132 ( 2145),  selected  132 , name T0302.pdb
# PARAMETERS: T0302TS393_1.T0302.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   132         1 - 132         3.44     3.44
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    56        16 - 71          1.97     3.55
  LONGEST_CONTINUOUS_SEGMENT:    56        17 - 72          1.99     3.55
  LCS_AVERAGE:     33.33

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    22       101 - 122         0.99     3.80
  LCS_AVERAGE:     10.92

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  132
LCS_GDT     S       1     S       1      4   15  132     2    6    9   13   15   16   18   29   60   98  113  120  123  125  126  129  130  132  132  132 
LCS_GDT     M       2     M       2      4   15  132     3    4    7   29   73   95  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     V       3     V       3      4   15  132     3    5    9   18   35   85   96  105  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S       4     S       4      4   15  132     3    5    9   19   51   91  101  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     P       5     P       5     11   15  132     7   10   10   36   82   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E       6     E       6     11   15  132     7   10   10   54   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E       7     E       7     11   15  132     7   10   10   13   15   58   96  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A       8     A       8     11   15  132     7   10   10   23   74   90   98  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     V       9     V       9     11   15  132     7   21   47   69   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      10     K      10     11   15  132     7   19   47   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     W      11     W      11     11   15  132     7   10   10   20   24   57   72  103  109  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     G      12     G      12     11   15  132     4   11   17   26   37   49   68   86   98  114  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      13     E      13     11   15  132     4   10   10   27   47   72   91  103  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S      14     S      14     11   15  132     6   10   19   30   54   89   95  103  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      15     F      15     11   15  132     6    7   10   19   29   44   62   82  104  114  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D      16     D      16      6   56  132     6   12   22   36   59   79   98  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      17     K      17      6   56  132     6   23   42   62   80   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L      18     L      18      6   56  132     6    7    7    8   10   20   57   99  109  115  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L      19     L      19      6   56  132     6    9   36   62   79   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S      20     S      20      4   56  132     3    5   43   68   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     H      21     H      21     15   56  132    10   21   45   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     R      22     R      22     17   56  132     9   30   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D      23     D      23     17   56  132    10   27   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     G      24     G      24     17   56  132    10   15   41   68   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L      25     L      25     17   56  132    10   15   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      26     E      26     17   56  132    10   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A      27     A      27     17   56  132     9   21   48   66   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      28     F      28     17   56  132    10   27   51   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      29     T      29     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     R      30     R      30     17   56  132    10   26   49   68   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      31     F      31     17   56  132    10   26   48   66   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L      32     L      32     17   56  132    10   31   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      33     K      33     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      34     T      34     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      35     E      35     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      36     F      36     17   56  132     5   19   44   63   83   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S      37     S      37     17   56  132     6   19   44   68   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      38     E      38     17   56  132     6   21   46   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      39     E      39     16   56  132     6   18   36   62   83   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     N      40     N      40     16   56  132     6   23   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      41     I      41     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      42     E      42     16   56  132     6   21   43   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      43     F      43     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     W      44     W      44     16   56  132     9   27   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      45     I      45     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A      46     A      46     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     C      47     C      47     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      48     E      48     16   56  132     9   27   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D      49     D      49     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      50     F      50     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      51     K      51     16   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      52     K      52      4   56  132    11   16   22   46   63   85  100  106  111  115  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S      53     S      53      4   56  132     3   17   39   61   81   95  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      54     K      54     17   56  132     6   31   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     G      55     G      55     17   56  132     9   24   48   65   82   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     P      56     P      56     17   56  132     7   27   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q      57     Q      57     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q      58     Q      58     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      59     I      59     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     H      60     H      60     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L      61     L      61     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      62     K      62     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A      63     A      63     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      64     K      64     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A      65     A      65     17   56  132    11   26   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      66     I      66     17   56  132    11   30   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Y      67     Y      67     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      68     E      68     17   56  132    11   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      69     K      69     17   56  132    11   25   48   69   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F      70     F      70     17   56  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      71     I      71      4   56  132     0    4    9   29   56   84   97  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q      72     Q      72      5   56  132     3    6   13   44   65   89   97  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      73     T      73      5   42  132     3    4    6    7   21   25   48   60   82  105  112  116  120  125  126  129  130  132  132  132 
LCS_GDT     D      74     D      74      5   38  132     3    4   20   42   65   84   97  103  111  115  119  123  124  125  127  129  130  132  132  132 
LCS_GDT     A      75     A      75      5   17  132     3    9   38   56   80   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     P      76     P      76      5   17  132     3    5    9   33   51   68   79  102  111  115  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      77     K      77      3   17  132     3    4    9   12   14   17   19   24   43   48   84  103  117  124  127  129  130  132  132  132 
LCS_GDT     E      78     E      78      3   17  132     0    3    4   10   12   16   18   20   24   33   57   63  107  114  125  129  130  132  132  132 
LCS_GDT     V      79     V      79      3   17  132     1    5    9   12   15   19   26   39   54   70   84  106  119  124  127  129  130  132  132  132 
LCS_GDT     N      80     N      80      5   17  132     0    5   10   13   17   23   37   53   63   73   86  106  117  124  126  129  130  132  132  132 
LCS_GDT     L      81     L      81      5   17  132     4    4    6    9   13   17   19   30   50   65   78   96  113  124  127  129  130  132  132  132 
LCS_GDT     D      82     D      82      5   40  132     4    4    9   13   25   42   58   74   92  105  113  118  120  125  127  129  130  132  132  132 
LCS_GDT     F      83     F      83     13   43  132    10   23   39   55   74   92  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     H      84     H      84     14   44  132    10   23   39   58   78   94  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      85     T      85     14   44  132    10   23   40   62   79   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K      86     K      86     14   44  132    10   23   40   62   79   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E      87     E      87     14   44  132    10   23   39   62   79   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     V      88     V      88     14   44  132    11   25   51   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      89     I      89     14   44  132    12   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      90     T      90     14   44  132    10   23   48   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     N      91     N      91     14   44  132    10   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S      92     S      92     14   44  132    10   13   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I      93     I      93     14   44  132     4   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      94     T      94     14   44  132     6   23   41   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q      95     Q      95     14   44  132     3   17   30   68   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     P      96     P      96     14   44  132     4   10   49   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T      97     T      97     14   44  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L      98     L      98      6   44  132     6   14   30   51   79   93  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     H      99     H      99      6   44  132     4    5    6   16   30   50   86  102  110  115  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S     100     S     100     15   44  132     4   13   31   59   80   95  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F     101     F     101     22   44  132     4   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D     102     D     102     22   44  132     9   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A     103     A     103     22   44  132    12   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     A     104     A     104     22   44  132    12   28   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q     105     Q     105     22   44  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S     106     S     106     22   44  132    12   26   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     R     107     R     107     22   44  132    12   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     V     108     V     108     22   44  132    12   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Y     109     Y     109     22   44  132    12   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q     110     Q     110     22   44  132    12   27   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L     111     L     111     22   44  132    12   27   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     M     112     M     112     22   44  132    12   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E     113     E     113     22   44  132    12   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Q     114     Q     114     22   44  132    12   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D     115     D     115     22   44  132     4   22   49   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S     116     S     116     22   44  132     3   15   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Y     117     Y     117     22   44  132    11   32   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     T     118     T     118     22   44  132    10   25   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     R     119     R     119     22   44  132     3   25   49   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     F     120     F     120     22   44  132     3   11   48   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L     121     L     121     22   44  132    10   25   38   66   83   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     K     122     K     122     22   44  132     6   11   26   38   62   80   98  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     S     123     S     123     17   44  132     5   11   16   24   52   72   98  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D     124     D     124     17   44  132     3   11   24   46   73   89   99  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     I     125     I     125     17   44  132     7   11   20   46   60   90  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     Y     126     Y     126     17   44  132     7   11   38   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L     127     L     127     17   44  132     7   11   48   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     D     128     D     128     17   42  132     7   11   21   46   81   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     L     129     L     129     17   33  132     7   11   38   66   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     M     130     M     130     17   33  132     7   25   52   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     E     131     E     131     17   33  132     7   12   53   70   84   96  103  106  111  116  120  123  124  125  127  129  130  132  132  132 
LCS_GDT     G     132     G     132      3   32  132     3    4   18   26   43   62   82  100  108  114  120  123  124  125  127  129  130  132  132  132 
LCS_AVERAGE  LCS_A:  48.09  (  10.92   33.33  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     12     32     53     70     84     96    103    106    111    116    120    123    124    125    127    129    130    132    132    132 
GDT PERCENT_CA   9.09  24.24  40.15  53.03  63.64  72.73  78.03  80.30  84.09  87.88  90.91  93.18  93.94  94.70  96.21  97.73  98.48 100.00 100.00 100.00
GDT RMS_LOCAL    0.26   0.75   1.07   1.32   1.52   1.78   1.95   2.03   2.19   2.42   2.62   2.75   2.79   2.86   3.03   3.20   3.26   3.44   3.44   3.44
GDT RMS_ALL_CA   3.87   3.57   3.51   3.49   3.50   3.47   3.47   3.47   3.47   3.47   3.46   3.46   3.46   3.45   3.44   3.44   3.45   3.44   3.44   3.44

#      Molecule1      Molecule2       DISTANCE
LGA    S       1      S       1          7.748
LGA    M       2      M       2          2.761
LGA    V       3      V       3          4.248
LGA    S       4      S       4          3.645
LGA    P       5      P       5          2.669
LGA    E       6      E       6          2.491
LGA    E       7      E       7          3.973
LGA    A       8      A       8          3.984
LGA    V       9      V       9          2.880
LGA    K      10      K      10          2.556
LGA    W      11      W      11          5.907
LGA    G      12      G      12          7.056
LGA    E      13      E      13          5.441
LGA    S      14      S      14          5.654
LGA    F      15      F      15          6.669
LGA    D      16      D      16          4.398
LGA    K      17      K      17          2.974
LGA    L      18      L      18          5.599
LGA    L      19      L      19          2.677
LGA    S      20      S      20          2.349
LGA    H      21      H      21          2.141
LGA    R      22      R      22          1.048
LGA    D      23      D      23          1.990
LGA    G      24      G      24          2.607
LGA    L      25      L      25          1.437
LGA    E      26      E      26          1.393
LGA    A      27      A      27          2.708
LGA    F      28      F      28          1.849
LGA    T      29      T      29          1.024
LGA    R      30      R      30          2.296
LGA    F      31      F      31          2.371
LGA    L      32      L      32          1.274
LGA    K      33      K      33          1.435
LGA    T      34      T      34          1.533
LGA    E      35      E      35          1.342
LGA    F      36      F      36          3.142
LGA    S      37      S      37          2.716
LGA    E      38      E      38          2.068
LGA    E      39      E      39          2.805
LGA    N      40      N      40          1.527
LGA    I      41      I      41          1.386
LGA    E      42      E      42          2.097
LGA    F      43      F      43          0.988
LGA    W      44      W      44          1.246
LGA    I      45      I      45          1.059
LGA    A      46      A      46          0.774
LGA    C      47      C      47          0.838
LGA    E      48      E      48          1.073
LGA    D      49      D      49          0.578
LGA    F      50      F      50          1.070
LGA    K      51      K      51          1.045
LGA    K      52      K      52          4.850
LGA    S      53      S      53          3.081
LGA    K      54      K      54          0.563
LGA    G      55      G      55          2.598
LGA    P      56      P      56          1.534
LGA    Q      57      Q      57          1.072
LGA    Q      58      Q      58          1.237
LGA    I      59      I      59          1.142
LGA    H      60      H      60          1.378
LGA    L      61      L      61          1.173
LGA    K      62      K      62          1.433
LGA    A      63      A      63          1.000
LGA    K      64      K      64          0.588
LGA    A      65      A      65          1.051
LGA    I      66      I      66          1.396
LGA    Y      67      Y      67          0.231
LGA    E      68      E      68          1.467
LGA    K      69      K      69          2.000
LGA    F      70      F      70          0.938
LGA    I      71      I      71          4.371
LGA    Q      72      Q      72          4.558
LGA    T      73      T      73          8.679
LGA    D      74      D      74          5.500
LGA    A      75      A      75          3.125
LGA    P      76      P      76          6.288
LGA    K      77      K      77          9.396
LGA    E      78      E      78         10.029
LGA    V      79      V      79          8.428
LGA    N      80      N      80          8.852
LGA    L      81      L      81          8.491
LGA    D      82      D      82          7.544
LGA    F      83      F      83          3.972
LGA    H      84      H      84          3.678
LGA    T      85      T      85          2.994
LGA    K      86      K      86          2.794
LGA    E      87      E      87          2.884
LGA    V      88      V      88          1.628
LGA    I      89      I      89          1.249
LGA    T      90      T      90          1.866
LGA    N      91      N      91          1.580
LGA    S      92      S      92          1.509
LGA    I      93      I      93          1.497
LGA    T      94      T      94          2.039
LGA    Q      95      Q      95          2.409
LGA    P      96      P      96          2.309
LGA    T      97      T      97          1.318
LGA    L      98      L      98          3.608
LGA    H      99      H      99          5.317
LGA    S     100      S     100          3.237
LGA    F     101      F     101          1.039
LGA    D     102      D     102          0.509
LGA    A     103      A     103          0.804
LGA    A     104      A     104          1.013
LGA    Q     105      Q     105          0.902
LGA    S     106      S     106          1.112
LGA    R     107      R     107          0.815
LGA    V     108      V     108          0.627
LGA    Y     109      Y     109          0.620
LGA    Q     110      Q     110          1.351
LGA    L     111      L     111          1.231
LGA    M     112      M     112          1.346
LGA    E     113      E     113          1.545
LGA    Q     114      Q     114          1.545
LGA    D     115      D     115          2.216
LGA    S     116      S     116          1.300
LGA    Y     117      Y     117          0.457
LGA    T     118      T     118          1.300
LGA    R     119      R     119          1.971
LGA    F     120      F     120          1.900
LGA    L     121      L     121          2.742
LGA    K     122      K     122          4.912
LGA    S     123      S     123          5.190
LGA    D     124      D     124          4.426
LGA    I     125      I     125          3.732
LGA    Y     126      Y     126          1.742
LGA    L     127      L     127          2.125
LGA    D     128      D     128          2.817
LGA    L     129      L     129          2.680
LGA    M     130      M     130          1.779
LGA    E     131      E     131          1.244
LGA    G     132      G     132          6.978

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  132  132    4.0    106    2.03    63.826    60.872     4.976

LGA_LOCAL      RMSD =  2.030  Number of atoms =  106  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.463  Number of atoms =  132 
Std_ALL_ATOMS  RMSD =  3.440  (standard rmsd on all 132 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.325300 * X  +   0.526219 * Y  +  -0.785668 * Z  + 122.784920
  Y_new =   0.943997 * X  +   0.132197 * Y  +  -0.302313 * Z  +  -4.001611
  Z_new =  -0.055219 * X  +  -0.840011 * Y  +  -0.539753 * Z  +   0.391656 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.141920    0.999673  [ DEG:  -122.7230     57.2770 ]
  Theta =   0.055247    3.086345  [ DEG:     3.1654    176.8345 ]
  Phi   =   1.902651   -1.238942  [ DEG:   109.0139    -70.9861 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0302TS393_1                                  
REMARK     2: T0302.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0302TS393_1.T0302.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  132  132   4.0  106   2.03  60.872     3.44
REMARK  ---------------------------------------------------------- 
MOLECULE T0302TS393_1
PFRMAT TS
TARGET T0302
MODEL 1
PARENT N/A
ATOM      1  CA  SER     1     146.043   4.324   9.560  1.00 25.00           C
ATOM      2  CA  MET     2     144.329   5.705   6.412  1.00 25.00           C
ATOM      3  CA  VAL     3     143.463   8.957   4.638  1.00 25.00           C
ATOM      4  CA  SER     4     145.077  11.010   1.951  1.00 25.00           C
ATOM      5  CA  PRO     5     143.861  12.554  -1.284  1.00 25.00           C
ATOM      6  CA  GLU     6     143.442  11.490  -4.939  1.00 25.00           C
ATOM      7  CA  GLU     7     144.479   7.914  -4.043  1.00 25.00           C
ATOM      8  CA  ALA     8     141.953   7.876  -1.166  1.00 25.00           C
ATOM      9  CA  VAL     9     139.207   9.121  -3.528  1.00 25.00           C
ATOM     10  CA  LYS    10     140.102   6.382  -6.051  1.00 25.00           C
ATOM     11  CA  TRP    11     139.950   3.744  -3.279  1.00 25.00           C
ATOM     12  CA  GLY    12     136.523   5.055  -2.185  1.00 25.00           C
ATOM     13  CA  GLU    13     135.279   4.895  -5.803  1.00 25.00           C
ATOM     14  CA  SER    14     136.553   1.296  -6.107  1.00 25.00           C
ATOM     15  CA  PHE    15     134.769   0.363  -2.849  1.00 25.00           C
ATOM     16  CA  ASP    16     131.529   1.942  -4.143  1.00 25.00           C
ATOM     17  CA  LYS    17     131.852  -0.018  -7.418  1.00 25.00           C
ATOM     18  CA  LEU    18     132.395  -3.260  -5.452  1.00 25.00           C
ATOM     19  CA  LEU    19     129.296  -2.519  -3.327  1.00 25.00           C
ATOM     20  CA  SER    20     131.805  -3.177  -0.507  1.00 25.00           C
ATOM     21  CA  HIS    21     135.467  -3.241   0.580  1.00 25.00           C
ATOM     22  CA  ARG    22     136.154  -1.002   3.651  1.00 25.00           C
ATOM     23  CA  ASP    23     136.349   2.108   5.879  1.00 25.00           C
ATOM     24  CA  GLY    24     134.457   4.144   3.244  1.00 25.00           C
ATOM     25  CA  LEU    25     131.764   1.428   3.040  1.00 25.00           C
ATOM     26  CA  GLU    26     131.435   1.435   6.856  1.00 25.00           C
ATOM     27  CA  ALA    27     131.087   5.248   6.845  1.00 25.00           C
ATOM     28  CA  PHE    28     128.382   5.017   4.143  1.00 25.00           C
ATOM     29  CA  THR    29     126.515   2.383   6.204  1.00 25.00           C
ATOM     30  CA  ARG    30     126.714   4.630   9.299  1.00 25.00           C
ATOM     31  CA  PHE    31     125.357   7.583   7.273  1.00 25.00           C
ATOM     32  CA  LEU    32     122.474   5.412   5.991  1.00 25.00           C
ATOM     33  CA  LYS    33     121.677   4.311   9.572  1.00 25.00           C
ATOM     34  CA  THR    34     121.681   7.966  10.721  1.00 25.00           C
ATOM     35  CA  GLU    35     118.294   8.110   8.977  1.00 25.00           C
ATOM     36  CA  PHE    36     117.237   5.985   6.002  1.00 25.00           C
ATOM     37  CA  SER    37     117.129   3.511   3.142  1.00 25.00           C
ATOM     38  CA  GLU    38     119.717   1.497   5.098  1.00 25.00           C
ATOM     39  CA  GLU    39     117.109  -1.297   4.847  1.00 25.00           C
ATOM     40  CA  ASN    40     118.456  -2.279   1.400  1.00 25.00           C
ATOM     41  CA  ILE    41     122.024  -2.362   2.792  1.00 25.00           C
ATOM     42  CA  GLU    42     120.864  -4.569   5.699  1.00 25.00           C
ATOM     43  CA  PHE    43     119.127  -6.937   3.240  1.00 25.00           C
ATOM     44  CA  TRP    44     122.316  -7.126   1.130  1.00 25.00           C
ATOM     45  CA  ILE    45     124.373  -7.911   4.264  1.00 25.00           C
ATOM     46  CA  ALA    46     121.896 -10.668   5.230  1.00 25.00           C
ATOM     47  CA  CYS    47     122.128 -12.144   1.703  1.00 25.00           C
ATOM     48  CA  GLU    48     125.951 -12.092   1.906  1.00 25.00           C
ATOM     49  CA  ASP    49     125.820 -13.852   5.304  1.00 25.00           C
ATOM     50  CA  PHE    50     123.468 -16.510   3.865  1.00 25.00           C
ATOM     51  CA  LYS    51     125.844 -17.045   0.909  1.00 25.00           C
ATOM     52  CA  LYS    52     127.752 -20.175  -0.053  1.00 25.00           C
ATOM     53  CA  SER    53     128.694 -21.358   3.456  1.00 25.00           C
ATOM     54  CA  LYS    54     126.887 -24.476   4.815  1.00 25.00           C
ATOM     55  CA  GLY    55     123.907 -26.536   3.542  1.00 25.00           C
ATOM     56  CA  PRO    56     120.393 -27.967   3.154  1.00 25.00           C
ATOM     57  CA  GLN    57     118.097 -27.336   6.154  1.00 25.00           C
ATOM     58  CA  GLN    58     120.430 -24.562   7.388  1.00 25.00           C
ATOM     59  CA  ILE    59     120.420 -22.969   3.905  1.00 25.00           C
ATOM     60  CA  HIS    60     116.593 -23.110   3.826  1.00 25.00           C
ATOM     61  CA  LEU    61     116.436 -21.467   7.281  1.00 25.00           C
ATOM     62  CA  LYS    62     118.820 -18.710   6.105  1.00 25.00           C
ATOM     63  CA  ALA    63     116.652 -18.124   3.002  1.00 25.00           C
ATOM     64  CA  LYS    64     113.524 -17.899   5.200  1.00 25.00           C
ATOM     65  CA  ALA    65     115.281 -15.376   7.484  1.00 25.00           C
ATOM     66  CA  ILE    66     116.302 -13.291   4.438  1.00 25.00           C
ATOM     67  CA  TYR    67     112.694 -13.351   3.157  1.00 25.00           C
ATOM     68  CA  GLU    68     111.429 -12.229   6.593  1.00 25.00           C
ATOM     69  CA  LYS    69     113.980  -9.373   6.625  1.00 25.00           C
ATOM     70  CA  PHE    70     112.861  -8.301   3.123  1.00 25.00           C
ATOM     71  CA  ILE    71     109.203  -8.343   4.252  1.00 25.00           C
ATOM     72  CA  GLN    72     106.811 -10.168   6.643  1.00 25.00           C
ATOM     73  CA  THR    73     104.289 -10.146   9.491  1.00 25.00           C
ATOM     74  CA  ASP    74     104.634  -6.501  10.550  1.00 25.00           C
ATOM     75  CA  ALA    75     105.451  -5.067   7.155  1.00 25.00           C
ATOM     76  CA  PRO    76     104.402  -1.702   8.474  1.00 25.00           C
ATOM     77  CA  LYS    77     103.155  -0.473   5.113  1.00 25.00           C
ATOM     78  CA  GLU    78     101.419  -0.540   1.766  1.00 25.00           C
ATOM     79  CA  VAL    79     104.657  -1.587  -0.023  1.00 25.00           C
ATOM     80  CA  ASN    80     103.269  -2.281  -3.532  1.00 25.00           C
ATOM     81  CA  LEU    81     105.383  -1.835  -6.663  1.00 25.00           C
ATOM     82  CA  ASP    82     104.485  -5.200  -8.262  1.00 25.00           C
ATOM     83  CA  PHE    83     105.302  -8.179  -6.032  1.00 25.00           C
ATOM     84  CA  HIS    84     106.686 -10.609  -8.649  1.00 25.00           C
ATOM     85  CA  THR    85     110.084 -10.615  -6.882  1.00 25.00           C
ATOM     86  CA  LYS    86     108.367 -11.324  -3.532  1.00 25.00           C
ATOM     87  CA  GLU    87     106.414 -14.213  -5.118  1.00 25.00           C
ATOM     88  CA  VAL    88     109.657 -15.642  -6.570  1.00 25.00           C
ATOM     89  CA  ILE    89     111.332 -15.398  -3.135  1.00 25.00           C
ATOM     90  CA  THR    90     108.355 -17.195  -1.529  1.00 25.00           C
ATOM     91  CA  ASN    91     108.562 -19.955  -4.176  1.00 25.00           C
ATOM     92  CA  SER    92     112.315 -20.340  -3.516  1.00 25.00           C
ATOM     93  CA  ILE    93     111.653 -20.588   0.248  1.00 25.00           C
ATOM     94  CA  THR    94     111.771 -24.361   0.218  1.00 25.00           C
ATOM     95  CA  GLN    95     114.422 -26.518  -1.565  1.00 25.00           C
ATOM     96  CA  PRO    96     117.138 -23.868  -1.692  1.00 25.00           C
ATOM     97  CA  THR    97     120.233 -22.269  -3.231  1.00 25.00           C
ATOM     98  CA  LEU    98     122.216 -19.009  -3.779  1.00 25.00           C
ATOM     99  CA  HIS    99     119.562 -18.189  -6.387  1.00 25.00           C
ATOM    100  CA  SER   100     116.489 -16.086  -5.495  1.00 25.00           C
ATOM    101  CA  PHE   101     118.392 -14.502  -2.573  1.00 25.00           C
ATOM    102  CA  ASP   102     121.333 -13.699  -4.889  1.00 25.00           C
ATOM    103  CA  ALA   103     118.938 -12.104  -7.417  1.00 25.00           C
ATOM    104  CA  ALA   104     117.356 -10.005  -4.631  1.00 25.00           C
ATOM    105  CA  GLN   105     120.830  -8.872  -3.482  1.00 25.00           C
ATOM    106  CA  SER   106     121.732  -7.908  -7.077  1.00 25.00           C
ATOM    107  CA  ARG   107     118.475  -5.919  -7.388  1.00 25.00           C
ATOM    108  CA  VAL   108     119.233  -4.116  -4.095  1.00 25.00           C
ATOM    109  CA  TYR   109     122.756  -3.275  -5.337  1.00 25.00           C
ATOM    110  CA  GLN   110     121.304  -1.912  -8.609  1.00 25.00           C
ATOM    111  CA  LEU   111     118.813   0.229  -6.640  1.00 25.00           C
ATOM    112  CA  MET   112     121.659   1.580  -4.462  1.00 25.00           C
ATOM    113  CA  GLU   113     123.690   2.425  -7.597  1.00 25.00           C
ATOM    114  CA  GLN   114     120.667   4.238  -9.096  1.00 25.00           C
ATOM    115  CA  ASP   115     120.462   6.905  -6.416  1.00 25.00           C
ATOM    116  CA  SER   116     121.511   7.992  -2.939  1.00 25.00           C
ATOM    117  CA  TYR   117     124.947   6.613  -3.758  1.00 25.00           C
ATOM    118  CA  THR   118     125.088   9.003  -6.747  1.00 25.00           C
ATOM    119  CA  ARG   119     125.110  12.009  -4.375  1.00 25.00           C
ATOM    120  CA  PHE   120     127.952  10.426  -2.354  1.00 25.00           C
ATOM    121  CA  LEU   121     129.936   9.820  -5.574  1.00 25.00           C
ATOM    122  CA  LYS   122     130.389  13.483  -6.397  1.00 25.00           C
ATOM    123  CA  SER   123     128.912  15.634  -3.616  1.00 25.00           C
ATOM    124  CA  ASP   124     129.391  17.530  -0.385  1.00 25.00           C
ATOM    125  CA  ILE   125     130.250  15.206   2.535  1.00 25.00           C
ATOM    126  CA  TYR   126     132.449  13.081   0.229  1.00 25.00           C
ATOM    127  CA  LEU   127     134.235  16.231  -1.013  1.00 25.00           C
ATOM    128  CA  ASP   128     134.825  17.352   2.601  1.00 25.00           C
ATOM    129  CA  LEU   129     136.243  13.900   3.465  1.00 25.00           C
ATOM    130  CA  MET   130     138.569  14.069   0.427  1.00 25.00           C
ATOM    131  CA  GLU   131     139.971  17.554   1.279  1.00 25.00           C
ATOM    132  CA  GLY   132     140.795  16.506   4.812  1.00 25.00           C
TER
END
