
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  144 (  144),  selected  144 , name T0310TS168_2-D2
# Molecule2: number of CA atoms  144 ( 1137),  selected  144 , name T0310_D2.pdb
# PARAMETERS: T0310TS168_2-D2.T0310_D2.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   144       216 - 359         4.63     4.63
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    57       303 - 359         1.96     4.93
  LCS_AVERAGE:     25.22

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    16       333 - 348         0.97     5.40
  LCS_AVERAGE:      6.70

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  144
LCS_GDT     E     216     E     216      3   35  144     7   12   26   61   82   96  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     G     217     G     217      3   35  144     3    4   30   62   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     218     I     218      5   35  144     5   20   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     C     219     C     219      5   35  144     4   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     220     H     220      9   35  144     4   15   35   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     M     221     M     221      9   35  144     4    8   19   47   75   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Y     222     Y     222      9   35  144     3    8   20   45   75   94  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     223     V     223      9   35  144     6   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     224     D     224      9   35  144     5   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     225     S     225      9   35  144     6   17   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     226     E     226      9   35  144     4   19   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     227     A     227      9   35  144     4   13   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     228     S     228     12   35  144     4   22   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     229     V     229     12   35  144     4   11   23   61   81   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     230     D     230     12   35  144     4    7   22   49   74   93  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     K     231     K     231     12   35  144     6   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     232     V     232     12   35  144     9   15   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     233     T     233     12   35  144     9   16   37   63   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     R     234     R     234     12   35  144     9   16   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     235     L     235     12   35  144     9   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     236     V     236     12   35  144     9   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     R     237     R     237     12   35  144     9   18   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     238     D     238     12   35  144     9   18   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     239     S     239     12   35  144     9   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     K     240     K     240     12   35  144     9   13   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     C     241     C     241      6   35  144     4   17   39   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     242     E     242      6   35  144     3   23   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Y     243     Y     243      6   35  144     7   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     P     244     P     244      4   35  144     3    5    8   36   63   91  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     245     A     245      4   35  144     7   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     246     A     246      3   35  144     3    3   10   41   65   95  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     C     247     C     247      3   35  144     3   11   19   32   65   86  104  114  118  122  125  128  128  129  131  133  134  135  138  140 
LCS_GDT     N     248     N     248      3   35  144     3    4   24   41   79   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     249     A     249      4   35  144     3    4   19   48   75   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     250     L     250      4   35  144     3   10   28   59   82   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     251     E     251      7   35  144     3   15   35   66   82   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     252     T     252      7   32  144     3    9   29   46   75   90  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     253     L     253      7   32  144     4   20   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     254     L     254      7   32  144     3   18   40   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     255     I     255      7   28  144     3   13   35   65   82   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     256     H     256      7   28  144     5   20   41   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     R     257     R     257      7   28  144     4   15   39   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     258     D     258      7   28  144     4   15   32   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     259     L     259      7   28  144     4   14   32   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     260     L     260      7   28  144     4   11   32   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     R     261     R     261      5   28  144     4    7   19   44   72   95  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     262     T     262      5   28  144     4    7   37   64   83   96  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     P     263     P     263     12   16  144     3   14   28   62   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     264     L     264     12   15  144    11   11   18   38   70   88  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     F     265     F     265     12   15  144    11   11   11   14   49   74  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     266     D     266     12   15  144    11   20   35   65   82   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Q     267     Q     267     12   15  144    11   11   11   22   58   87  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     268     I     268     12   15  144    11   11   11   15   38   74  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     269     I     269     12   15  144    11   11   11   50   82   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     270     D     270     12   15  144    11   11   16   31   48   87  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     M     271     M     271     12   15  144    11   11   11   17   37   67   96  109  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     272     L     272     12   15  144    11   11   11   17   36   70  101  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     R     273     R     273     12   15  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     274     V     274     12   15  144    11   11   11   20   44   64   96  109  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     275     E     275     12   15  144     3    4    7   14   40   63   91  109  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Q     276     Q     276      5   15  144     3    7   20   44   69   89  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     277     V     277      5   15  144     2    7   22   44   66   88  101  112  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     K     278     K     278      5    9  144     3    5    7   16   25   75   94  108  116  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     279     I     279      5    9  144     3    5    7    9   23   75   94  109  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     280     H     280      4    9  144     3    3    7    9   13   21   45   61   81  103  109  121  126  128  131  133  134  137  138  140 
LCS_GDT     A     281     A     281      4    9  144     3    4    7   10   21   31   45   61   71   93  101  116  124  128  130  133  134  137  138  140 
LCS_GDT     G     282     G     282      4    9  144     3    4    5    7   13   18   24   30   40   50   62   78   89  105  119  123  134  135  138  140 
LCS_GDT     P     283     P     283      7    9  144     5    7    7   10   13   20   28   36   47   58   70   89  100  111  119  132  134  137  138  140 
LCS_GDT     K     284     K     284      7    9  144     5    7   11   19   40   52   83   99  113  120  124  128  128  129  131  133  134  137  138  140 
LCS_GDT     F     285     F     285      7    8  144     5    7    7    8    8   10   25   84  102  118  123  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     286     A     286      7    8  144     5    7   12   31   57   74   94  108  115  120  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     287     S     287      7    8  144     5    7   12   34   64   88  100  108  115  121  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Y     288     Y     288      7    8  144     4    7   23   39   70   89  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     289     L     289      7    8  144     7   13   23   43   70   90  105  114  118  122  125  128  128  129  131  133  134  136  138  140 
LCS_GDT     T     290     T     290      3    8  144     3    3    3    3    8    8   55   76   93  112  122  125  125  128  130  131  132  134  136  138 
LCS_GDT     F     291     F     291      3    3  144     3    3    3    3    5    5    7   10   10   11  100  104  121  125  127  131  131  132  134  135 
LCS_GDT     V     292     V     292      3    4  144     3    7   14   31   54   74   94  107  115  120  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     K     293     K     293      3    5  144     3    3   11   16   23   34   45   61   71   96  108  117  126  128  131  133  134  137  138  140 
LCS_GDT     S     294     S     294      4    5  144     3    4    4    4    4   31   45   55   70   83   97  107  117  127  129  132  134  137  138  140 
LCS_GDT     L     295     L     295      4    5  144     3    4    4    4    6    6   13   16   44   53   99  107  119  128  131  133  134  137  138  140 
LCS_GDT     R     296     R     296      4    5  144     3    4    4    4    7   10   13   18   20   23   31   38   44   55   69   86  112  122  134  137 
LCS_GDT     T     297     T     297      4    5  144     3    4    5    5    6   10   13   18   20   23   27   38   44   60   96  106  112  126  134  140 
LCS_GDT     E     298     E     298      4    5  144     3    4    4    4    7   10   15   20   32   37   52   62   78   95  111  127  132  137  138  140 
LCS_GDT     Y     299     Y     299      4    4  144     3    4    4    4   14   16   23   29   39   44   57   68   86  104  121  127  133  137  138  140 
LCS_GDT     G     300     G     300      4    6  144     3    4    5    8   13   18   20   30   44   56   66   90  101  111  122  127  133  137  138  140 
LCS_GDT     D     301     D     301      3    6  144     3    3    5    8   17   25   34   49   66   89  101  118  126  128  130  133  134  137  138  140 
LCS_GDT     L     302     L     302      3   10  144     3    3    5    5    6   10   29   53   76  108  118  124  128  129  130  133  134  137  138  140 
LCS_GDT     E     303     E     303      9   57  144     3   10   31   53   77   94  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     304     L     304      9   57  144     3   12   27   53   77   93  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     C     305     C     305      9   57  144     3   12   27   50   73   92  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     306     I     306      9   57  144     6   16   37   64   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     307     E     307      9   57  144     5   17   38   64   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     308     V     308      9   57  144     5   15   33   57   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     309     V     309      9   57  144     3   14   36   64   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     310     D     310     12   57  144     3   14   31   62   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     N     311     N     311     12   57  144     3   14   31   58   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     312     V     312     12   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Q     313     Q     313     12   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     314     D     314     12   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     315     A     315     12   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     316     I     316     12   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     317     D     317     12   57  144    11   20   37   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     318     H     318     12   57  144    11   20   40   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     319     I     319     12   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     320     H     320     12   57  144    11   20   36   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     K     321     K     321     12   57  144    11   18   32   55   82   96  104  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Y     322     Y     322     12   57  144     4   13   39   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     G     323     G     323      4   57  144     3    4    4    6   10   74  101  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     324     S     324     15   57  144     5   15   39   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     325     S     325     15   57  144     3   14   37   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     326     H     326     15   57  144     3   20   41   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     327     T     327     15   57  144     5   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     328     D     328     15   57  144    11   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     329     V     329     15   57  144     6   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     I     330     I     330     15   57  144     5   20   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     331     V     331     15   57  144     3   20   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     332     T     332     15   57  144     4   20   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     333     E     333     16   57  144     4   20   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     334     D     334     16   57  144     3   20   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     335     E     335     16   57  144     9   13   30   62   82   94  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     N     336     N     336     16   57  144     9   16   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     337     T     337     16   57  144     9   16   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     338     A     338     16   57  144     9   15   37   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     E     339     E     339     16   57  144     9   16   38   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     F     340     F     340     16   57  144     9   18   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     F     341     F     341     16   57  144     9   18   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     L     342     L     342     16   57  144     9   16   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     Q     343     Q     343     16   57  144     9   20   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     H     344     H     344     16   57  144     8   20   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     345     V     345     16   57  144     6   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     D     346     D     346     16   57  144     3   13   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     347     S     347     16   57  144     4   20   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     348     A     348     16   57  144     4   23   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     C     349     C     349     12   57  144     3   17   39   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     V     350     V     350     12   57  144     4   17   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     F     351     F     351     12   57  144     4   23   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     W     352     W     352     12   57  144     3   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     N     353     N     353     12   57  144     4   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     A     354     A     354     12   57  144     7   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     355     S     355     12   57  144     3   13   33   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     T     356     T     356     12   57  144     3   11   34   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     R     357     R     357     12   57  144     7   24   42   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     F     358     F     358     12   57  144     4   12   36   66   83   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_GDT     S     359     S     359      6   57  144     3   10   30   64   82   96  105  114  118  122  125  128  128  129  131  133  134  137  138  140 
LCS_AVERAGE  LCS_A:  43.97  (   6.70   25.22  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     11     24     42     66     83     96    105    114    118    122    125    128    128    129    131    133    134    137    138    140 
GDT PERCENT_CA   7.64  16.67  29.17  45.83  57.64  66.67  72.92  79.17  81.94  84.72  86.81  88.89  88.89  89.58  90.97  92.36  93.06  95.14  95.83  97.22
GDT RMS_LOCAL    0.21   0.76   1.06   1.43   1.66   1.85   2.13   2.32   2.41   2.55   2.67   2.83   2.83   2.92   3.16   3.32   3.43   4.05   3.94   4.19
GDT RMS_ALL_CA   6.00   5.04   4.99   4.98   4.92   4.93   5.03   4.99   4.98   4.98   4.91   4.83   4.83   4.82   4.74   4.72   4.70   4.63   4.64   4.63

#      Molecule1      Molecule2       DISTANCE
LGA    E     216      E     216          3.311
LGA    G     217      G     217          2.806
LGA    I     218      I     218          1.362
LGA    C     219      C     219          1.134
LGA    H     220      H     220          2.551
LGA    M     221      M     221          3.421
LGA    Y     222      Y     222          3.573
LGA    V     223      V     223          1.322
LGA    D     224      D     224          0.782
LGA    S     225      S     225          2.305
LGA    E     226      E     226          1.950
LGA    A     227      A     227          2.805
LGA    S     228      S     228          1.779
LGA    V     229      V     229          2.615
LGA    D     230      D     230          2.306
LGA    K     231      K     231          0.864
LGA    V     232      V     232          2.204
LGA    T     233      T     233          2.472
LGA    R     234      R     234          2.009
LGA    L     235      L     235          1.050
LGA    V     236      V     236          1.174
LGA    R     237      R     237          1.510
LGA    D     238      D     238          1.698
LGA    S     239      S     239          1.205
LGA    K     240      K     240          1.827
LGA    C     241      C     241          1.342
LGA    E     242      E     242          0.801
LGA    Y     243      Y     243          1.482
LGA    P     244      P     244          3.678
LGA    A     245      A     245          0.786
LGA    A     246      A     246          2.682
LGA    C     247      C     247          4.653
LGA    N     248      N     248          2.430
LGA    A     249      A     249          2.204
LGA    L     250      L     250          2.639
LGA    E     251      E     251          3.026
LGA    T     252      T     252          4.365
LGA    L     253      L     253          2.286
LGA    L     254      L     254          2.550
LGA    I     255      I     255          3.075
LGA    H     256      H     256          1.955
LGA    R     257      R     257          2.692
LGA    D     258      D     258          3.328
LGA    L     259      L     259          3.353
LGA    L     260      L     260          3.234
LGA    R     261      R     261          4.499
LGA    T     262      T     262          3.893
LGA    P     263      P     263          2.543
LGA    L     264      L     264          2.901
LGA    F     265      F     265          3.515
LGA    D     266      D     266          3.784
LGA    Q     267      Q     267          3.712
LGA    I     268      I     268          3.582
LGA    I     269      I     269          3.078
LGA    D     270      D     270          3.970
LGA    M     271      M     271          4.803
LGA    L     272      L     272          3.575
LGA    R     273      R     273          2.076
LGA    V     274      V     274          5.066
LGA    E     275      E     275          4.643
LGA    Q     276      Q     276          3.789
LGA    V     277      V     277          4.240
LGA    K     278      K     278          6.074
LGA    I     279      I     279          5.589
LGA    H     280      H     280          9.917
LGA    A     281      A     281         11.078
LGA    G     282      G     282         14.013
LGA    P     283      P     283         14.559
LGA    K     284      K     284          8.037
LGA    F     285      F     285          7.694
LGA    A     286      A     286          7.247
LGA    S     287      S     287          5.724
LGA    Y     288      Y     288          3.601
LGA    L     289      L     289          3.512
LGA    T     290      T     290          6.762
LGA    F     291      F     291          9.620
LGA    V     292      V     292          7.354
LGA    K     293      K     293         11.979
LGA    S     294      S     294         12.405
LGA    L     295      L     295         10.362
LGA    R     296      R     296         16.652
LGA    T     297      T     297         16.205
LGA    E     298      E     298         14.505
LGA    Y     299      Y     299         14.456
LGA    G     300      G     300         14.996
LGA    D     301      D     301         11.364
LGA    L     302      L     302          8.779
LGA    E     303      E     303          3.012
LGA    L     304      L     304          3.279
LGA    C     305      C     305          3.623
LGA    I     306      I     306          2.078
LGA    E     307      E     307          1.839
LGA    V     308      V     308          2.717
LGA    V     309      V     309          3.242
LGA    D     310      D     310          3.346
LGA    N     311      N     311          3.368
LGA    V     312      V     312          0.490
LGA    Q     313      Q     313          1.205
LGA    D     314      D     314          1.315
LGA    A     315      A     315          0.810
LGA    I     316      I     316          1.288
LGA    D     317      D     317          2.303
LGA    H     318      H     318          2.205
LGA    I     319      I     319          1.378
LGA    H     320      H     320          2.452
LGA    K     321      K     321          3.471
LGA    Y     322      Y     322          2.023
LGA    G     323      G     323          3.936
LGA    S     324      S     324          1.996
LGA    S     325      S     325          1.757
LGA    H     326      H     326          1.975
LGA    T     327      T     327          1.090
LGA    D     328      D     328          0.948
LGA    V     329      V     329          0.933
LGA    I     330      I     330          1.473
LGA    V     331      V     331          2.535
LGA    T     332      T     332          2.593
LGA    E     333      E     333          2.964
LGA    D     334      D     334          2.460
LGA    E     335      E     335          3.415
LGA    N     336      N     336          2.689
LGA    T     337      T     337          2.743
LGA    A     338      A     338          2.646
LGA    E     339      E     339          2.175
LGA    F     340      F     340          1.612
LGA    F     341      F     341          1.651
LGA    L     342      L     342          1.801
LGA    Q     343      Q     343          1.243
LGA    H     344      H     344          0.967
LGA    V     345      V     345          1.310
LGA    D     346      D     346          1.486
LGA    S     347      S     347          1.597
LGA    A     348      A     348          0.756
LGA    C     349      C     349          1.826
LGA    V     350      V     350          1.289
LGA    F     351      F     351          1.228
LGA    W     352      W     352          0.446
LGA    N     353      N     353          0.594
LGA    A     354      A     354          0.576
LGA    S     355      S     355          1.993
LGA    T     356      T     356          1.987
LGA    R     357      R     357          0.825
LGA    F     358      F     358          1.816
LGA    S     359      S     359          2.273

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  144  144    4.0    114    2.32    58.507    54.617     4.717

LGA_LOCAL      RMSD =  2.317  Number of atoms =  114  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  5.071  Number of atoms =  144 
Std_ALL_ATOMS  RMSD =  4.628  (standard rmsd on all 144 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.004609 * X  +   0.995588 * Y  +   0.093715 * Z  + 134.844696
  Y_new =   0.038662 * X  +  -0.093824 * Y  +   0.994838 * Z  +   6.718082
  Z_new =   0.999242 * X  +  -0.000962 * Y  +  -0.038924 * Z  +  19.944429 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -3.116880    0.024712  [ DEG:  -178.5841      1.4159 ]
  Theta =  -1.531851   -1.609742  [ DEG:   -87.7686    -92.2314 ]
  Phi   =   1.452141   -1.689452  [ DEG:    83.2015    -96.7985 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0310TS168_2-D2                               
REMARK     2: T0310_D2.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0310TS168_2-D2.T0310_D2.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  144  144   4.0  114   2.32  54.617     4.63
REMARK  ---------------------------------------------------------- 
MOLECULE T0310TS168_2-D2
PFRMAT TS
TARGET T0310
MODEL 2
PARENT N/A
ATOM    216  CA  GLU   216     138.050  11.413  18.746  1.00 25.00           C
ATOM    217  CA  GLY   217     137.160  13.055  22.059  1.00 25.00           C
ATOM    218  CA  ILE   218     136.268  16.076  19.927  1.00 25.00           C
ATOM    219  CA  CYS   219     137.824  17.982  22.788  1.00 25.00           C
ATOM    220  CA  HIS   220     139.379  19.801  25.689  1.00 25.00           C
ATOM    221  CA  MET   221     141.333  20.589  28.913  1.00 25.00           C
ATOM    222  CA  TYR   222     140.061  23.981  29.925  1.00 25.00           C
ATOM    223  CA  VAL   223     140.291  27.678  30.770  1.00 25.00           C
ATOM    224  CA  ASP   224     137.221  29.512  32.111  1.00 25.00           C
ATOM    225  CA  SER   225     137.739  32.420  34.398  1.00 25.00           C
ATOM    226  CA  GLU   226     138.478  32.861  38.078  1.00 25.00           C
ATOM    227  CA  ALA   227     140.724  29.824  37.920  1.00 25.00           C
ATOM    228  CA  SER   228     144.349  30.218  39.108  1.00 25.00           C
ATOM    229  CA  VAL   229     144.969  30.637  35.391  1.00 25.00           C
ATOM    230  CA  ASP   230     148.476  29.150  35.790  1.00 25.00           C
ATOM    231  CA  LYS   231     146.960  25.806  36.879  1.00 25.00           C
ATOM    232  CA  VAL   232     144.635  25.840  33.837  1.00 25.00           C
ATOM    233  CA  THR   233     147.615  26.558  31.538  1.00 25.00           C
ATOM    234  CA  ARG   234     149.560  23.660  33.115  1.00 25.00           C
ATOM    235  CA  LEU   235     146.561  21.334  32.600  1.00 25.00           C
ATOM    236  CA  VAL   236     146.313  22.425  28.937  1.00 25.00           C
ATOM    237  CA  ARG   237     150.053  21.758  28.458  1.00 25.00           C
ATOM    238  CA  ASP   238     149.659  18.284  30.023  1.00 25.00           C
ATOM    239  CA  SER   239     146.710  17.544  27.692  1.00 25.00           C
ATOM    240  CA  LYS   240     148.785  18.660  24.673  1.00 25.00           C
ATOM    241  CA  CYS   241     150.523  15.399  23.773  1.00 25.00           C
ATOM    242  CA  GLU   242     151.738  13.154  26.520  1.00 25.00           C
ATOM    243  CA  TYR   243     149.863  10.472  24.676  1.00 25.00           C
ATOM    244  CA  PRO   244     150.918  10.572  21.025  1.00 25.00           C
ATOM    245  CA  ALA   245     147.649   9.939  19.193  1.00 25.00           C
ATOM    246  CA  ALA   246     145.061   7.226  19.901  1.00 25.00           C
ATOM    247  CA  CYS   247     144.835   8.266  23.493  1.00 25.00           C
ATOM    248  CA  ASN   248     141.737  10.189  22.442  1.00 25.00           C
ATOM    249  CA  ALA   249     143.916  13.048  21.090  1.00 25.00           C
ATOM    250  CA  LEU   250     142.661  15.348  23.907  1.00 25.00           C
ATOM    251  CA  GLU   251     143.823  18.056  21.504  1.00 25.00           C
ATOM    252  CA  THR   252     143.301  21.500  23.024  1.00 25.00           C
ATOM    253  CA  LEU   253     142.500  24.752  24.764  1.00 25.00           C
ATOM    254  CA  LEU   254     140.070  27.522  25.672  1.00 25.00           C
ATOM    255  CA  ILE   255     142.164  30.416  26.973  1.00 25.00           C
ATOM    256  CA  HIS   256     139.123  32.443  27.979  1.00 25.00           C
ATOM    257  CA  ARG   257     137.958  36.050  28.128  1.00 25.00           C
ATOM    258  CA  ASP   258     138.993  36.970  31.700  1.00 25.00           C
ATOM    259  CA  LEU   259     141.992  34.601  31.467  1.00 25.00           C
ATOM    260  CA  LEU   260     143.011  36.177  28.129  1.00 25.00           C
ATOM    261  CA  ARG   261     142.751  39.673  29.672  1.00 25.00           C
ATOM    262  CA  THR   262     144.917  38.556  32.627  1.00 25.00           C
ATOM    263  CA  PRO   263     147.807  36.381  31.314  1.00 25.00           C
ATOM    264  CA  LEU   264     147.236  33.926  28.467  1.00 25.00           C
ATOM    265  CA  PHE   265     150.800  34.833  27.398  1.00 25.00           C
ATOM    266  CA  ASP   266     152.135  31.651  29.061  1.00 25.00           C
ATOM    267  CA  GLN   267     149.481  29.564  27.254  1.00 25.00           C
ATOM    268  CA  ILE   268     150.442  31.183  23.920  1.00 25.00           C
ATOM    269  CA  ILE   269     154.135  30.422  24.586  1.00 25.00           C
ATOM    270  CA  ASP   270     153.266  26.781  25.390  1.00 25.00           C
ATOM    271  CA  MET   271     151.247  26.521  22.146  1.00 25.00           C
ATOM    272  CA  LEU   272     154.192  27.966  20.170  1.00 25.00           C
ATOM    273  CA  ARG   273     156.561  25.439  21.802  1.00 25.00           C
ATOM    274  CA  VAL   274     154.167  22.584  20.913  1.00 25.00           C
ATOM    275  CA  GLU   275     155.872  21.213  17.788  1.00 25.00           C
ATOM    276  CA  GLN   276     154.187  24.121  16.048  1.00 25.00           C
ATOM    277  CA  VAL   277     150.999  26.121  16.763  1.00 25.00           C
ATOM    278  CA  LYS   278     148.849  29.178  17.472  1.00 25.00           C
ATOM    279  CA  ILE   279     145.738  29.972  19.493  1.00 25.00           C
ATOM    280  CA  HIS   280     145.867  33.348  21.099  1.00 25.00           C
ATOM    281  CA  ALA   281     145.536  36.514  23.156  1.00 25.00           C
ATOM    282  CA  GLY   282     144.122  40.002  23.297  1.00 25.00           C
ATOM    283  CA  PRO   283     140.958  42.222  23.381  1.00 25.00           C
ATOM    284  CA  LYS   284     138.255  39.803  22.154  1.00 25.00           C
ATOM    285  CA  PHE   285     138.353  41.417  18.682  1.00 25.00           C
ATOM    286  CA  ALA   286     142.167  41.086  18.608  1.00 25.00           C
ATOM    287  CA  SER   287     141.891  37.397  19.598  1.00 25.00           C
ATOM    288  CA  TYR   288     139.318  36.819  16.821  1.00 25.00           C
ATOM    289  CA  LEU   289     141.633  38.519  14.287  1.00 25.00           C
ATOM    290  CA  THR   290     144.547  36.316  15.437  1.00 25.00           C
ATOM    291  CA  PHE   291     142.365  33.191  15.063  1.00 25.00           C
ATOM    292  CA  VAL   292     141.354  34.289  11.536  1.00 25.00           C
ATOM    293  CA  LYS   293     145.033  34.843  10.627  1.00 25.00           C
ATOM    294  CA  SER   294     145.912  31.362  11.963  1.00 25.00           C
ATOM    295  CA  LEU   295     143.074  29.827   9.899  1.00 25.00           C
ATOM    296  CA  ARG   296     144.326  31.651   6.774  1.00 25.00           C
ATOM    297  CA  THR   297     147.875  30.362   7.414  1.00 25.00           C
ATOM    298  CA  GLU   298     146.535  26.796   7.810  1.00 25.00           C
ATOM    299  CA  TYR   299     144.597  27.133   4.524  1.00 25.00           C
ATOM    300  CA  GLY   300     142.763  24.397   6.363  1.00 25.00           C
ATOM    301  CA  ASP   301     143.833  22.633   9.493  1.00 25.00           C
ATOM    302  CA  LEU   302     143.900  21.611  13.203  1.00 25.00           C
ATOM    303  CA  GLU   303     145.374  20.729  16.613  1.00 25.00           C
ATOM    304  CA  LEU   304     142.359  22.578  18.122  1.00 25.00           C
ATOM    305  CA  CYS   305     139.265  24.709  18.274  1.00 25.00           C
ATOM    306  CA  ILE   306     140.993  27.155  20.542  1.00 25.00           C
ATOM    307  CA  GLU   307     137.773  29.251  20.414  1.00 25.00           C
ATOM    308  CA  VAL   308     136.235  31.327  23.217  1.00 25.00           C
ATOM    309  CA  VAL   309     134.376  32.717  26.232  1.00 25.00           C
ATOM    310  CA  ASP   310     131.637  34.632  28.017  1.00 25.00           C
ATOM    311  CA  ASN   311     131.143  32.760  31.298  1.00 25.00           C
ATOM    312  CA  VAL   312     130.377  29.775  29.143  1.00 25.00           C
ATOM    313  CA  GLN   313     127.760  29.874  26.348  1.00 25.00           C
ATOM    314  CA  ASP   314     130.491  30.685  23.788  1.00 25.00           C
ATOM    315  CA  ALA   315     132.603  27.763  25.077  1.00 25.00           C
ATOM    316  CA  ILE   316     129.584  25.423  24.794  1.00 25.00           C
ATOM    317  CA  ASP   317     128.965  26.616  21.208  1.00 25.00           C
ATOM    318  CA  HIS   318     132.643  25.998  20.341  1.00 25.00           C
ATOM    319  CA  ILE   319     132.429  22.477  21.834  1.00 25.00           C
ATOM    320  CA  HIS   320     129.270  21.775  19.788  1.00 25.00           C
ATOM    321  CA  LYS   321     131.025  22.997  16.611  1.00 25.00           C
ATOM    322  CA  TYR   322     133.214  19.962  16.399  1.00 25.00           C
ATOM    323  CA  GLY   323     130.171  17.699  16.210  1.00 25.00           C
ATOM    324  CA  SER   324     130.914  15.823  19.485  1.00 25.00           C
ATOM    325  CA  SER   325     128.944  14.198  22.281  1.00 25.00           C
ATOM    326  CA  HIS   326     132.424  13.591  23.718  1.00 25.00           C
ATOM    327  CA  THR   327     134.997  14.792  26.244  1.00 25.00           C
ATOM    328  CA  ASP   328     134.701  18.354  27.546  1.00 25.00           C
ATOM    329  CA  VAL   329     136.277  20.392  30.271  1.00 25.00           C
ATOM    330  CA  ILE   330     135.300  23.725  31.836  1.00 25.00           C
ATOM    331  CA  VAL   331     137.454  25.095  34.716  1.00 25.00           C
ATOM    332  CA  THR   332     136.058  27.614  37.135  1.00 25.00           C
ATOM    333  CA  GLU   333     135.930  28.690  40.762  1.00 25.00           C
ATOM    334  CA  ASP   334     133.301  31.196  39.641  1.00 25.00           C
ATOM    335  CA  GLU   335     131.041  29.202  41.922  1.00 25.00           C
ATOM    336  CA  ASN   336     127.419  29.178  40.677  1.00 25.00           C
ATOM    337  CA  THR   337     128.635  29.495  37.059  1.00 25.00           C
ATOM    338  CA  ALA   338     131.069  26.589  37.597  1.00 25.00           C
ATOM    339  CA  GLU   339     128.244  24.461  39.064  1.00 25.00           C
ATOM    340  CA  PHE   340     126.025  25.285  36.053  1.00 25.00           C
ATOM    341  CA  PHE   341     128.858  24.306  33.668  1.00 25.00           C
ATOM    342  CA  LEU   342     129.327  21.000  35.544  1.00 25.00           C
ATOM    343  CA  GLN   343     125.568  20.307  35.313  1.00 25.00           C
ATOM    344  CA  HIS   344     125.638  21.033  31.554  1.00 25.00           C
ATOM    345  CA  VAL   345     127.955  20.924  28.627  1.00 25.00           C
ATOM    346  CA  ASP   346     127.449  17.464  27.208  1.00 25.00           C
ATOM    347  CA  SER   347     129.766  14.606  28.176  1.00 25.00           C
ATOM    348  CA  ALA   348     130.693  10.911  28.526  1.00 25.00           C
ATOM    349  CA  CYS   349     133.293  11.179  31.346  1.00 25.00           C
ATOM    350  CA  VAL   350     133.339  14.903  32.116  1.00 25.00           C
ATOM    351  CA  PHE   351     135.494  16.799  34.616  1.00 25.00           C
ATOM    352  CA  TRP   352     137.219  20.089  35.409  1.00 25.00           C
ATOM    353  CA  ASN   353     140.903  20.443  36.373  1.00 25.00           C
ATOM    354  CA  ALA   354     141.684  17.080  34.851  1.00 25.00           C
ATOM    355  CA  SER   355     141.685  15.835  31.267  1.00 25.00           C
ATOM    356  CA  THR   356     140.419  13.470  28.563  1.00 25.00           C
ATOM    357  CA  ARG   357     143.615  11.520  29.370  1.00 25.00           C
ATOM    358  CA  PHE   358     141.602   9.055  31.500  1.00 25.00           C
ATOM    359  CA  SER   359     139.748   7.716  28.415  1.00 25.00           C
TER
END
