
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  103 (  103),  selected  103 , name T0314TS599_5-D1
# Molecule2: number of CA atoms  103 ( 1643),  selected  103 , name T0314_D1.pdb
# PARAMETERS: T0314TS599_5-D1.T0314_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    33         1 - 33          4.83    16.73
  LCS_AVERAGE:     29.07

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15        18 - 32          1.72    23.62
  LCS_AVERAGE:     10.14

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    10        20 - 29          0.81    24.33
  LCS_AVERAGE:      6.20

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  103
LCS_GDT     M       1     M       1      3    5   33     0    3    4    6   11   17   18   22   26   30   35   39   43   45   48   56   61   65   69   72 
LCS_GDT     S       2     S       2      3    5   33     0    3    4    6   11   13   17   21   26   28   35   39   43   45   47   51   61   65   69   72 
LCS_GDT     I       3     I       3      4   13   33     3    3    4    5   12   13   17   22   26   30   35   39   43   45   50   56   61   65   69   72 
LCS_GDT     T       4     T       4      4   13   33     3    3    6    8   12   17   18   22   26   32   40   44   50   52   57   61   63   65   69   72 
LCS_GDT     S       5     S       5      4   13   33     3    5    5   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     T       6     T       6      8   13   33     3    5    7   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     D       7     D       7      9   13   33     4    8    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     I       8     I       8      9   13   33     4    8    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     C       9     C       9      9   13   33     4    8    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     Q      10     Q      10      9   13   33     4    8    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     A      11     A      11      9   13   33     4    8    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     A      12     A      12      9   13   33     4    8    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     D      13     D      13      9   13   33     4    8    9   10   12   17   19   22   26   31   39   47   50   52   57   61   63   65   69   72 
LCS_GDT     A      14     A      14      9   13   33     4    8    9   10   12   17   19   22   26   35   40   47   50   52   57   61   63   65   69   72 
LCS_GDT     L      15     L      15      9   13   33     3    4    9   10   12   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     K      16     K      16      3   11   33     3    3    6    6    8   10   13   17   21   30   35   39   43   49   55   60   63   65   69   72 
LCS_GDT     G      17     G      17      3    4   33     1    3    3    4    6   11   19   22   26   30   35   40   46   51   57   61   63   65   69   72 
LCS_GDT     F      18     F      18      5   15   33     3    6    9   13   15   17   17   22   29   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     V      19     V      19      6   15   33     3    5    9   13   15   17   17   24   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     G      20     G      20     10   15   33     3    9   10   13   15   17   17   17   24   30   35   39   46   51   57   61   63   65   69   72 
LCS_GDT     F      21     F      21     10   15   33     3    9   10   13   15   17   17   17   20   29   35   39   43   49   55   60   63   65   68   72 
LCS_GDT     N      22     N      22     10   15   33     4    9   10   13   15   17   17   17   20   29   35   39   43   46   49   58   63   65   67   69 
LCS_GDT     R      23     R      23     10   15   33     3    9   10   13   15   17   17   17   18   18   25   33   37   42   44   49   52   53   57   60 
LCS_GDT     K      24     K      24     10   15   33     4    9   10   13   14   17   17   17   18   18   27   33   37   41   44   49   52   53   56   58 
LCS_GDT     T      25     T      25     10   15   33     4    9   10   13   15   17   17   17   20   29   35   39   43   46   50   58   63   65   67   69 
LCS_GDT     G      26     G      26     10   15   33     4    9   10   13   15   17   17   20   24   30   35   39   43   49   55   60   63   65   69   72 
LCS_GDT     R      27     R      27     10   15   33     4    9   10   13   15   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     Y      28     Y      28     10   15   33     4    9   10   13   15   17   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     I      29     I      29     10   15   33     4    7   10   13   15   17   19   23   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     V      30     V      30      5   15   33     4    6    9   13   15   17   19   23   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     R      31     R      31      5   15   33     4    7    9   13   15   17   19   21   26   30   36   41   47   51   57   61   63   65   69   72 
LCS_GDT     F      32     F      32      5   15   33     3    4    9   12   15   17   19   22   26   30   35   41   47   51   57   61   63   65   69   72 
LCS_GDT     S      33     S      33      5    8   33     4    4    6    7   10   12   14   17   23   30   35   39   46   50   56   61   63   65   69   72 
LCS_GDT     E      34     E      34      5    8   28     4    4    6    6    8   10   12   19   26   31   38   45   50   52   57   61   63   65   69   72 
LCS_GDT     D      35     D      35      5    8   26     4    4    6    6   10   10   14   19   24   30   38   45   50   52   57   61   63   65   69   72 
LCS_GDT     S      36     S      36      5    8   26     4    4    6    6    8   10   15   19   23   26   31   39   44   50   56   61   63   65   67   72 
LCS_GDT     F      37     F      37      5    8   26     4    4    5    6    8   11   15   19   23   29   36   46   50   52   57   61   63   65   69   72 
LCS_GDT     G      38     G      38      5    6   26     3    4    5    6    8   10   15   19   23   34   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     M      39     M      39      5    6   26     3    4    5    6    7    8   12   14   25   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     D      40     D      40      3   10   26     3    3    4    7    9   11   16   23   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     V      41     V      41      6   10   26     3    5    6    8   12   15   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     A      42     A      42      6   10   26     3    5    7    8    9   10   12   16   21   24   34   37   42   49   51   55   59   65   69   72 
LCS_GDT     D      43     D      43      6   10   26     3    5    7    8    9   10   12   12   12   16   21   27   35   39   44   52   56   60   64   69 
LCS_GDT     D      44     D      44      6   10   26     4    5    7    8    9   10   12   12   15   16   21   26   31   33   37   44   51   54   60   62 
LCS_GDT     S      45     S      45      6   10   26     4    5    7    8    9   10   12   16   21   24   28   33   38   47   51   55   58   65   69   72 
LCS_GDT     I      46     I      46      6   10   26     4    5    7    8    9   10   12   14   17   22   26   33   38   47   51   56   61   65   69   72 
LCS_GDT     T      47     T      47      6   10   26     3    3    6    8    9   10   12   16   21   24   28   33   37   47   51   56   61   65   69   72 
LCS_GDT     P      48     P      48      6   10   26     3    5    7    8    9   10   13   14   17   21   26   29   31   35   36   40   43   48   53   61 
LCS_GDT     T      49     T      49      4   10   26     4    5    7    7    9   12   13   14   17   21   26   29   33   35   38   43   45   48   53   61 
LCS_GDT     S      50     S      50      4   10   26     3    3    6    8    8   10   12   14   17   21   26   29   33   35   38   40   45   48   53   56 
LCS_GDT     E      51     E      51      4    6   26     3    3    4    5    6    7   12   14   16   21   23   29   33   39   41   43   47   57   64   69 
LCS_GDT     F      52     F      52      4    7   26     3    3    6    7    8    9   11   12   17   21   25   33   38   47   51   55   59   65   69   72 
LCS_GDT     V      53     V      53      4   10   25     4    4    6    7    8    9   11   11   12   14   17   17   20   22   31   39   47   54   57   62 
LCS_GDT     W      54     W      54      4   10   25     4    4    5    7    8    9   11   11   17   20   21   23   25   26   29   33   40   44   51   56 
LCS_GDT     S      55     S      55      4   10   25     4    4    6    7    8    9   11   12   13   14   21   23   25   26   28   29   34   37   44   47 
LCS_GDT     S      56     S      56      4   10   25     4    4    6    6    8   10   13   15   18   20   21   23   25   26   28   29   32   33   37   37 
LCS_GDT     V      57     V      57      4   10   25     4    4    6    6    8    9   11   14   17   19   21   23   25   26   28   29   32   33   37   37 
LCS_GDT     R      58     R      58      4   10   25     4    5    6    8   10   12   13   15   18   20   21   23   25   26   28   29   32   33   37   37 
LCS_GDT     D      59     D      59      6   10   25     3    5    7    8   10   12   13   15   18   20   21   23   25   26   28   29   32   33   37   37 
LCS_GDT     D      60     D      60      6   10   25     3    5    7    8   10   12   13   15   18   20   21   23   25   26   28   29   32   33   37   37 
LCS_GDT     V      61     V      61      6   10   25     3    5    7    8   10   12   13   15   18   20   21   23   25   26   28   29   32   33   37   37 
LCS_GDT     M      62     M      62      6   10   25     3    5    7    8   10   12   13   15   18   20   21   23   25   26   28   29   32   33   37   38 
LCS_GDT     R      63     R      63      6   10   25     4    5    7    8   10   12   14   15   18   20   21   23   25   26   28   29   32   35   37   40 
LCS_GDT     L      64     L      64      6   13   25     4    4    6    8   10   13   14   15   18   20   21   23   25   26   28   31   34   36   38   40 
LCS_GDT     G      65     G      65      5   13   25     4    4    8   11   12   13   14   15   18   20   23   24   29   31   33   34   36   39   42   46 
LCS_GDT     R      66     R      66      8   13   25     4    5    8   11   12   13   14   15   18   20   23   25   29   31   33   34   36   42   44   49 
LCS_GDT     E      67     E      67      8   13   25     4    5    8   11   12   13   14   15   18   20   26   28   30   33   37   40   43   47   52   54 
LCS_GDT     Q      68     Q      68      9   13   25     4    7    9   11   12   13   14   15   18   20   23   26   29   33   37   40   42   45   48   53 
LCS_GDT     L      69     L      69      9   13   25     4    7    9   11   12   13   14   15   18   20   23   25   29   31   37   40   43   46   52   54 
LCS_GDT     Q      70     Q      70      9   13   25     4    7    9   11   12   13   14   15   21   24   28   33   36   40   47   53   57   64   69   72 
LCS_GDT     I      71     I      71      9   13   25     3    7    9   11   13   17   17   17   20   24   28   33   36   41   48   53   57   64   69   72 
LCS_GDT     L      72     L      72      9   13   32     3    7    9   12   15   17   17   17   18   22   28   33   36   44   51   55   58   65   69   72 
LCS_GDT     L      73     L      73      9   13   32     4    7    9   11   12   13   14   17   20   25   32   36   45   48   56   61   63   65   69   72 
LCS_GDT     E      74     E      74      9   13   32     4    7    9   11   12   17   19   22   26   35   41   47   50   52   57   61   63   65   69   72 
LCS_GDT     Q      75     Q      75      9   13   32     4    7    9   11   12   13   17   22   26   35   40   47   50   52   57   61   63   65   69   72 
LCS_GDT     N      76     N      76      9   13   32     4    7    9   10   12   17   19   22   26   30   36   42   47   52   57   61   63   65   69   72 
LCS_GDT     I      77     I      77      8   13   32     5    7    8   10   11   13   19   22   29   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     N      78     N      78      8   11   32     5    7    8    8   12   16   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     E      79     E      79      8   11   32     5    7    8    9   12   16   21   24   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     R      80     R      80      8   11   32     5    7    8    8   10   12   15   24   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     L      81     L      81      8   11   32     5    7    8    8   10   12   15   19   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     N      82     N      82      8   11   32     4    7    8    8   10   15   19   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     I      83     I      83      8   11   32     4    7    8    8   10   15   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     G      84     G      84      8   11   32     4    7    8    8   10   12   14   21   25   26   37   43   49   52   57   61   63   65   69   72 
LCS_GDT     E      85     E      85      3   11   32     3    3    5    7    9   16   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     P      86     P      86      7   11   32     6    7    8    8   10   11   15   19   23   28   36   47   50   52   57   61   63   65   69   72 
LCS_GDT     L      87     L      87      7   11   32     6    7    8    8   10   16   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     L      88     L      88      7    7   32     6    7    8    8   10   10   12   24   26   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     V      89     V      89      7    7   32     6    7    8    8   10   15   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     Y      90     Y      90      7    7   32     6    7    8    8   10   12   16   22   29   36   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     L      91     L      91      7    7   32     6    7    8    8   10   10   13   16   18   18   25   30   41   48   56   61   63   65   69   72 
LCS_GDT     R      92     R      92      7    7   32     3    4    8    8   10   10   13   16   19   23   28   36   41   46   56   61   63   65   69   72 
LCS_GDT     R      93     R      93      3    5   32     3    3    4    6    9   15   20   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     Q      94     Q      94      4    5   32     4    4    4    5    6   13   18   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     D      95     D      95      4    5   32     4    4    4    5    9   15   20   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     L      96     L      96      4    5   32     4    4    4    6    7   15   18   25   29   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     P      97     P      97      4    5   32     4    4    4    6    9   15   20   25   29   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     E      98     E      98      4    4   32     3    4    4    6    8   12   20   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     I      99     I      99      4    4   32     3    4    4    6    9   13   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     T     100     T     100      3    3   32     3    5    5    8   12   16   21   25   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     A     101     A     101      3    3   32     3    3    4    6    9   12   18   24   31   37   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     Q     102     Q     102      3    3   32     3    4    6   10   12   16   21   24   31   38   42   47   50   52   57   61   63   65   69   72 
LCS_GDT     R     103     R     103      3    3   32     0    3    3    3    3    5   17   23   26   35   42   47   50   52   57   61   63   65   69   72 
LCS_AVERAGE  LCS_A:  15.14  (   6.20   10.14   29.07 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      6      9     10     13     15     17     21     25     31     38     42     47     50     52     57     61     63     65     69     72 
GDT PERCENT_CA   5.83   8.74   9.71  12.62  14.56  16.50  20.39  24.27  30.10  36.89  40.78  45.63  48.54  50.49  55.34  59.22  61.17  63.11  66.99  69.90
GDT RMS_LOCAL    0.35   0.68   0.81   1.37   1.68   1.94   2.89   3.01   3.59   3.87   4.08   4.35   4.60   4.69   5.05   5.32   5.44   5.75   6.13   6.34
GDT RMS_ALL_CA  20.03  24.61  24.33  24.05  23.27  23.73  13.38  13.28  13.63  13.79  13.81  13.71  13.88  13.89  14.02  14.15  14.18  14.40  13.66  13.74

#      Molecule1      Molecule2       DISTANCE
LGA    M       1      M       1         15.366
LGA    S       2      S       2         15.362
LGA    I       3      I       3         12.604
LGA    T       4      T       4          6.711
LGA    S       5      S       5          3.424
LGA    T       6      T       6          2.458
LGA    D       7      D       7          2.413
LGA    I       8      I       8          3.473
LGA    C       9      C       9          3.658
LGA    Q      10      Q      10          3.024
LGA    A      11      A      11          2.237
LGA    A      12      A      12          2.659
LGA    D      13      D      13          6.728
LGA    A      14      A      14          7.001
LGA    L      15      L      15          3.247
LGA    K      16      K      16          8.839
LGA    G      17      G      17         10.290
LGA    F      18      F      18          6.462
LGA    V      19      V      19          4.942
LGA    G      20      G      20          8.659
LGA    F      21      F      21         10.351
LGA    N      22      N      22         12.604
LGA    R      23      R      23         16.740
LGA    K      24      K      24         17.019
LGA    T      25      T      25         10.287
LGA    G      26      G      26          9.222
LGA    R      27      R      27          3.510
LGA    Y      28      Y      28          2.968
LGA    I      29      I      29          5.884
LGA    V      30      V      30          6.546
LGA    R      31      R      31         11.516
LGA    F      32      F      32         12.505
LGA    S      33      S      33         15.456
LGA    E      34      E      34         12.581
LGA    D      35      D      35         14.036
LGA    S      36      S      36         14.955
LGA    F      37      F      37         10.770
LGA    G      38      G      38         10.183
LGA    M      39      M      39          7.705
LGA    D      40      D      40          6.716
LGA    V      41      V      41          3.155
LGA    A      42      A      42          6.476
LGA    D      43      D      43         12.026
LGA    D      44      D      44         14.683
LGA    S      45      S      45          8.912
LGA    I      46      I      46          9.484
LGA    T      47      T      47         10.416
LGA    P      48      P      48         16.023
LGA    T      49      T      49         14.196
LGA    S      50      S      50         17.522
LGA    E      51      E      51         14.604
LGA    F      52      F      52          9.256
LGA    V      53      V      53         12.974
LGA    W      54      W      54         15.756
LGA    S      55      S      55         17.593
LGA    S      56      S      56         22.618
LGA    V      57      V      57         27.640
LGA    R      58      R      58         32.183
LGA    D      59      D      59         31.767
LGA    D      60      D      60         31.339
LGA    V      61      V      61         33.638
LGA    M      62      M      62         29.301
LGA    R      63      R      63         31.662
LGA    L      64      L      64         27.925
LGA    G      65      G      65         26.328
LGA    R      66      R      66         22.865
LGA    E      67      E      67         21.594
LGA    Q      68      Q      68         19.566
LGA    L      69      L      69         15.850
LGA    Q      70      Q      70         12.703
LGA    I      71      I      71         12.756
LGA    L      72      L      72         10.849
LGA    L      73      L      73          9.840
LGA    E      74      E      74          8.024
LGA    Q      75      Q      75          8.053
LGA    N      76      N      76         11.025
LGA    I      77      I      77          7.616
LGA    N      78      N      78          4.496
LGA    E      79      E      79          5.267
LGA    R      80      R      80          7.297
LGA    L      81      L      81          6.051
LGA    N      82      N      82          3.846
LGA    I      83      I      83          3.501
LGA    G      84      G      84          5.252
LGA    E      85      E      85          2.131
LGA    P      86      P      86          5.631
LGA    L      87      L      87          2.007
LGA    L      88      L      88          4.661
LGA    V      89      V      89          2.085
LGA    Y      90      Y      90          5.973
LGA    L      91      L      91          8.279
LGA    R      92      R      92          7.416
LGA    R      93      R      93          2.411
LGA    Q      94      Q      94          3.878
LGA    D      95      D      95          2.897
LGA    L      96      L      96          3.814
LGA    P      97      P      97          3.139
LGA    E      98      E      98          3.410
LGA    I      99      I      99          2.712
LGA    T     100      T     100          2.255
LGA    A     101      A     101          7.135
LGA    Q     102      Q     102          6.642
LGA    R     103      R     103          6.986

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  103  103    4.0     25    3.01    26.214    22.251     0.803

LGA_LOCAL      RMSD =  3.012  Number of atoms =   25  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 13.253  Number of atoms =  103 
Std_ALL_ATOMS  RMSD = 12.553  (standard rmsd on all 103 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.690615 * X  +   0.561717 * Y  +  -0.455549 * Z  +  17.401430
  Y_new =   0.590466 * X  +   0.801648 * Y  +   0.093327 * Z  +   5.197848
  Z_new =   0.417614 * X  +  -0.204533 * Y  +  -0.885305 * Z  + -16.348143 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.914545    0.227047  [ DEG:  -166.9911     13.0089 ]
  Theta =  -0.430818   -2.710775  [ DEG:   -24.6840   -155.3160 ]
  Phi   =   2.434211   -0.707381  [ DEG:   139.4700    -40.5300 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0314TS599_5-D1                               
REMARK     2: T0314_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0314TS599_5-D1.T0314_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  103  103   4.0   25   3.01  22.251    12.55
REMARK  ---------------------------------------------------------- 
MOLECULE T0314TS599_5-D1
PFRMAT TS                                                                       
TARGET T0314                                                                    
MODEL  5                                                                        
PARENT N/A                                                                      
ATOM      1  CA  MET     1      16.391   6.067   2.274  1.00  0.00              
ATOM      2  CA  SER     2      13.495   9.015   3.072  1.00  0.00              
ATOM      3  CA  ILE     3      10.276  11.112   2.470  1.00  0.00              
ATOM      4  CA  THR     4       6.883  12.781   1.406  1.00  0.00              
ATOM      5  CA  SER     5       5.109  11.187  -1.504  1.00  0.00              
ATOM      6  CA  THR     6       5.939  14.176  -3.775  1.00  0.00              
ATOM      7  CA  ASP     7       9.653  13.763  -3.175  1.00  0.00              
ATOM      8  CA  ILE     8       9.452   9.994  -3.933  1.00  0.00              
ATOM      9  CA  CYS     9       7.502  10.442  -7.182  1.00  0.00              
ATOM     10  CA  GLN    10       9.966  13.089  -8.433  1.00  0.00              
ATOM     11  CA  ALA    11      12.946  10.837  -7.503  1.00  0.00              
ATOM     12  CA  ALA    12      11.340   7.919  -9.253  1.00  0.00              
ATOM     13  CA  ASP    13      10.804   9.916 -12.448  1.00  0.00              
ATOM     14  CA  ALA    14      14.430  11.091 -12.430  1.00  0.00              
ATOM     15  CA  LEU    15      15.769   7.566 -11.856  1.00  0.00              
ATOM     16  CA  LYS    16      13.658   6.235 -14.674  1.00  0.00              
ATOM     17  CA  GLY    17      14.949   8.879 -17.050  1.00  0.00              
ATOM     18  CA  PHE    18      18.682   8.251 -16.273  1.00  0.00              
ATOM     19  CA  VAL    19      18.128   4.540 -16.809  1.00  0.00              
ATOM     20  CA  GLY    20      15.855   3.700 -19.704  1.00  0.00              
ATOM     21  CA  PHE    21      14.320   0.274 -19.957  1.00  0.00              
ATOM     22  CA  ASN    22      13.850  -1.433 -23.254  1.00  0.00              
ATOM     23  CA  ARG    23      10.986  -3.791 -22.927  1.00  0.00              
ATOM     24  CA  LYS    24      11.399  -5.997 -25.945  1.00  0.00              
ATOM     25  CA  THR    25      14.883  -7.254 -25.361  1.00  0.00              
ATOM     26  CA  GLY    26      15.465  -6.899 -21.588  1.00  0.00              
ATOM     27  CA  ARG    27      18.243  -4.414 -22.158  1.00  0.00              
ATOM     28  CA  TYR    28      18.835  -1.274 -20.037  1.00  0.00              
ATOM     29  CA  ILE    29      19.606   1.915 -21.840  1.00  0.00              
ATOM     30  CA  VAL    30      21.643   4.656 -20.273  1.00  0.00              
ATOM     31  CA  ARG    31      21.113   8.199 -21.482  1.00  0.00              
ATOM     32  CA  PHE    32      24.056  10.514 -21.619  1.00  0.00              
ATOM     33  CA  SER    33      23.764  14.109 -22.843  1.00  0.00              
ATOM     34  CA  GLU    34      26.663  14.584 -25.275  1.00  0.00              
ATOM     35  CA  ASP    35      28.838  16.553 -22.938  1.00  0.00              
ATOM     36  CA  SER    36      28.280  14.768 -19.660  1.00  0.00              
ATOM     37  CA  PHE    37      29.392  11.235 -20.582  1.00  0.00              
ATOM     38  CA  GLY    38      31.189  11.241 -23.908  1.00  0.00              
ATOM     39  CA  MET    39      31.233   7.955 -25.512  1.00  0.00              
ATOM     40  CA  ASP    40      32.796   5.400 -27.731  1.00  0.00              
ATOM     41  CA  VAL    41      30.193   3.062 -29.255  1.00  0.00              
ATOM     42  CA  ALA    42      32.006  -0.228 -29.925  1.00  0.00              
ATOM     43  CA  ASP    43      30.367  -3.402 -31.098  1.00  0.00              
ATOM     44  CA  ASP    44      29.039  -5.300 -28.044  1.00  0.00              
ATOM     45  CA  SER    45      27.535  -2.163 -26.581  1.00  0.00              
ATOM     46  CA  ILE    46      25.465  -0.403 -29.180  1.00  0.00              
ATOM     47  CA  THR    47      22.320   1.039 -27.770  1.00  0.00              
ATOM     48  CA  PRO    48      19.242   0.687 -30.017  1.00  0.00              
ATOM     49  CA  THR    49      16.221   0.233 -27.753  1.00  0.00              
ATOM     50  CA  SER    50      14.183   3.204 -28.940  1.00  0.00              
ATOM     51  CA  GLU    51      17.328   5.332 -29.257  1.00  0.00              
ATOM     52  CA  PHE    52      19.260   4.615 -26.169  1.00  0.00              
ATOM     53  CA  VAL    53      22.452   6.504 -25.578  1.00  0.00              
ATOM     54  CA  TRP    54      25.083   4.947 -23.505  1.00  0.00              
ATOM     55  CA  SER    55      27.613   6.967 -21.619  1.00  0.00              
ATOM     56  CA  SER    56      30.794   5.279 -20.352  1.00  0.00              
ATOM     57  CA  VAL    57      33.825   7.022 -21.764  1.00  0.00              
ATOM     58  CA  ARG    58      36.584   4.584 -20.661  1.00  0.00              
ATOM     59  CA  ASP    59      39.229   5.607 -23.171  1.00  0.00              
ATOM     60  CA  ASP    60      37.095   4.829 -26.210  1.00  0.00              
ATOM     61  CA  VAL    61      35.919   1.371 -25.340  1.00  0.00              
ATOM     62  CA  MET    62      32.473  -0.057 -25.586  1.00  0.00              
ATOM     63  CA  ARG    63      31.992  -3.873 -25.476  1.00  0.00              
ATOM     64  CA  LEU    64      29.312  -5.022 -23.089  1.00  0.00              
ATOM     65  CA  GLY    65      27.330  -8.167 -23.536  1.00  0.00              
ATOM     66  CA  ARG    66      23.664  -8.340 -22.734  1.00  0.00              
ATOM     67  CA  GLU    67      24.146 -10.158 -19.422  1.00  0.00              
ATOM     68  CA  GLN    68      26.768  -7.596 -18.347  1.00  0.00              
ATOM     69  CA  LEU    69      24.664  -4.562 -19.246  1.00  0.00              
ATOM     70  CA  GLN    70      21.692  -5.986 -17.329  1.00  0.00              
ATOM     71  CA  ILE    71      23.811  -6.536 -14.267  1.00  0.00              
ATOM     72  CA  LEU    72      25.287  -3.001 -14.272  1.00  0.00              
ATOM     73  CA  LEU    73      21.923  -1.330 -14.734  1.00  0.00              
ATOM     74  CA  GLU    74      19.773  -2.975 -12.017  1.00  0.00              
ATOM     75  CA  GLN    75      22.281  -2.383  -9.284  1.00  0.00              
ATOM     76  CA  ASN    76      23.220   1.129 -10.213  1.00  0.00              
ATOM     77  CA  ILE    77      19.754   2.728 -10.627  1.00  0.00              
ATOM     78  CA  ASN    78      18.294   1.309  -7.459  1.00  0.00              
ATOM     79  CA  GLU    79      21.297   2.462  -5.407  1.00  0.00              
ATOM     80  CA  ARG    80      21.400   6.087  -6.639  1.00  0.00              
ATOM     81  CA  LEU    81      17.682   6.502  -5.923  1.00  0.00              
ATOM     82  CA  ASN    82      16.581   4.674  -2.725  1.00  0.00              
ATOM     83  CA  ILE    83      13.620   2.613  -3.798  1.00  0.00              
ATOM     84  CA  GLY    84      11.586   1.528  -0.857  1.00  0.00              
ATOM     85  CA  GLU    85       7.968   2.099  -1.988  1.00  0.00              
ATOM     86  CA  PRO    86       6.516   0.905  -5.242  1.00  0.00              
ATOM     87  CA  LEU    87       6.819   3.803  -7.750  1.00  0.00              
ATOM     88  CA  LEU    88       3.364   3.773  -9.314  1.00  0.00              
ATOM     89  CA  VAL    89       1.715   3.378  -5.888  1.00  0.00              
ATOM     90  CA  TYR    90       3.724   5.962  -3.895  1.00  0.00              
ATOM     91  CA  LEU    91       2.893   8.432  -6.740  1.00  0.00              
ATOM     92  CA  ARG    92      -0.772   7.661  -7.483  1.00  0.00              
ATOM     93  CA  ARG    93      -0.655   6.634 -11.159  1.00  0.00              
ATOM     94  CA  GLN    94      -2.894   9.495 -12.274  1.00  0.00              
ATOM     95  CA  ASP    95      -0.746  12.084 -10.489  1.00  0.00              
ATOM     96  CA  LEU    96       2.531  11.082 -12.147  1.00  0.00              
ATOM     97  CA  PRO    97       1.370  11.782 -15.731  1.00  0.00              
ATOM     98  CA  GLU    98       0.103  15.206 -14.607  1.00  0.00              
ATOM     99  CA  ILE    99       3.337  16.202 -12.827  1.00  0.00              
ATOM    100  CA  THR   100       5.339  15.189 -15.898  1.00  0.00              
ATOM    101  CA  ALA   101       3.017  17.227 -18.157  1.00  0.00              
ATOM    102  CA  GLN   102       3.081  20.477 -16.165  1.00  0.00              
ATOM    103  CA  ARG   103       6.914  20.524 -15.978  1.00  0.00              
TER                                                                             
END
