
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   65 (  260),  selected   65 , name T0320AL257_5-D2
# Molecule2: number of CA atoms   73 (  604),  selected   65 , name T0320_D2.pdb
# PARAMETERS: T0320AL257_5-D2.T0320_D2.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    17       230 - 246         4.98    14.77
  LONGEST_CONTINUOUS_SEGMENT:    17       242 - 258         4.91    27.26
  LCS_AVERAGE:     19.96

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     7       244 - 250         1.98    25.66
  LCS_AVERAGE:      7.25

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     5       237 - 241         0.52    18.33
  LONGEST_CONTINUOUS_SEGMENT:     5       243 - 247         0.68    29.42
  LONGEST_CONTINUOUS_SEGMENT:     5       252 - 256         0.87    30.65
  LCS_AVERAGE:      5.25

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   73
LCS_GDT     N     228     N     228      4    6   13     3    4    4    4    5    6    6    8   10   10   10   12   12   12   14   15   15   16   18   21 
LCS_GDT     N     229     N     229      4    6   14     3    4    4    5    6    6    7    9   10   10   13   15   16   19   20   23   26   29   30   34 
LCS_GDT     S     230     S     230      4    6   17     3    4    4    6    7   10   11   11   13   13   16   20   21   23   24   26   27   30   32   34 
LCS_GDT     L     231     L     231      4    6   17     3    6    7    7    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     P     232     P     232      4    6   17     3    6    7    7    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     N     233     N     233      4    6   17     3    4    4    5    6    8    9    9   11   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     P     234     P     234      3    6   17     3    3    4    4    6    8    9    9   11   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     H     235     H     235      3    6   17     3    3    4    5    6    8    9    9   11   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     L     236     L     236      3    5   17     3    3    5    6    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     R     237     R     237      5    6   17     3    6    7    7    7    8    9   11   12   13   15   18   21   23   24   26   27   30   32   34 
LCS_GDT     K     238     K     238      5    6   17     3    6    7    7    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     D     239     D     239      5    6   17     3    6    7    7    7    8    9    9   10   12   14   15   18   20   23   26   27   30   32   34 
LCS_GDT     S     240     S     240      5    6   17     3    6    7    7    7    7    8    9   10   11   14   14   18   20   21   22   24   28   31   34 
LCS_GDT     N     241     N     241      5    6   17     3    5    7    7    7    7    8    9   11   12   14   15   18   22   24   26   26   30   32   34 
LCS_GDT     N     242     N     242      3    6   17     3    4    5    6    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     P     243     P     243      5    5   17     3    5    5    6    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     A     244     A     244      5    7   17     4    5    5    6    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     L     245     L     245      5    7   17     4    5    5    6    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     H     246     H     246      5    7   17     4    5    5    5    6    8    8    9   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     F     247     F     247      5    7   17     4    5    5    6    7    8    8    9   10   13   15   17   20   23   24   26   27   30   32   34 
LCS_GDT     E     248     E     248      4    7   17     4    4    4    6    7    8    8    9   10   12   13   14   16   19   21   24   25   29   32   34 
LCS_GDT     W     249     W     249      4    7   17     4    4    4    6    7    8    8    9   10   11   12   14   16   16   18   20   20   22   25   28 
LCS_GDT     E     250     E     250      4    7   17     4    4    5    6    7    8    8    9   10   11   13   14   17   18   21   23   25   29   32   34 
LCS_GDT     I     251     I     251      4    6   17     3    4    5    5    6    7    8    9   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     I     252     I     252      5    6   17     3    4    5    5    6    7    8    9   11   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     H     253     H     253      5    6   17     3    4    5    5    6    6    7    8   10   12   15   17   20   22   23   24   25   28   32   34 
LCS_GDT     A     254     A     254      5    6   17     3    4    5    5    6    6    7    8   10   12   13   15   17   19   21   24   25   28   30   31 
LCS_GDT     F     255     F     255      5    6   17     0    4    5    5    6    6    7    8    9   11   12   14   16   16   19   20   22   25   26   28 
LCS_GDT     G     256     G     256      5    6   17     0    3    5    5    6    6    7    8   10   11   12   14   16   16   17   18   21   22   24   26 
LCS_GDT     K     257     K     257      3    3   17     0    3    3    3    7    7    7    9   10   11   12   14   16   16   17   18   19   20   24   26 
LCS_GDT     D     258     D     258      0    3   17     0    0    3    6    7    7    7    9   10   11   12   14   16   16   17   18   19   20   22   22 
LCS_GDT     P     271     P     271      3    5   14     3    3    4    6    7    8    8    9   11   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     I     272     I     272      3    5   14     3    3    4    4    5    6    8    9   11   13   16   20   21   23   24   26   27   30   32   34 
LCS_GDT     S     273     S     273      3    5   14     3    4    5    6    7    8   10   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     V     274     V     274      4    5   14     4    4    5    6    7   10   11   11   13   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     V     275     V     275      4    5   14     4    4    5    5    6   10   11   11   12   14   18   20   21   23   24   26   27   30   32   34 
LCS_GDT     D     276     D     276      4    5   14     4    4    5    5    5    7    8    9   11   12   13   15   20   23   24   26   27   30   32   34 
LCS_GDT     K     277     K     277      4    5   14     4    4    5    5    5    7    8    8   10   12   13   16   21   23   24   26   27   30   32   34 
LCS_GDT     E     278     E     278      4    5   14     3    4    5    5    5    7    8    8   10   12   13   15   17   18   21   25   27   30   32   34 
LCS_GDT     R     279     R     279      4    4   14     3    4    4    5    5    6    7    8   10   12   13   15   17   18   21   25   27   30   32   34 
LCS_GDT     F     280     F     280      4    4   14     3    3    4    4    5    6    7    8   10   12   13   15   17   18   21   25   27   30   32   34 
LCS_GDT     S     281     S     281      3    3   14     3    3    3    3    5    6    7    8   10   12   13   15   16   18   19   22   24   26   28   30 
LCS_GDT     K     282     K     282      3    3   14     3    3    4    4    5    6    7    8   10   12   13   15   16   18   20   22   24   26   28   30 
LCS_GDT     Y     283     Y     283      3    3   14     3    3    4    4    4    4    6    7   10   12   13   15   16   18   20   22   24   26   28   30 
LCS_GDT     H     284     H     284      3    3   14     3    3    4    4    4    4    5    6   10   11   13   15   16   18   19   20   22   25   25   28 
LCS_GDT     D     285     D     285      3    5    9     3    3    5    5    5    6    6    6    6    8   10   10   10   15   16   16   17   17   17   19 
LCS_GDT     N     286     N     286      4    5   12     3    4    5    5    5    6    6    7    7    8   11   12   12   15   16   16   17   18   19   20 
LCS_GDT     Y     287     Y     287      4    5   12     3    4    5    5    5    6    7    8    9   10   13   13   14   15   16   16   17   18   19   20 
LCS_GDT     Y     288     Y     288      4    5   12     3    4    5    5    6    7    7    9    9   10   13   13   14   15   16   16   17   18   19   20 
LCS_GDT     P     289     P     289      4    5   12     3    4    5    5    6    7    7    9    9   10   13   13   14   14   15   18   18   19   20   20 
LCS_GDT     G     290     G     290      3    5   12     3    3    3    4    5    6    7    8    9   11   12   12   15   16   17   18   18   19   20   20 
LCS_GDT     W     291     W     291      3    5   12     3    3    3    5    6    7    7    9    9   11   13   14   16   20   21   23   24   28   31   34 
LCS_GDT     Y     292     Y     292      4    6   12     3    3    4    5    6    7    7    9    9   11   13   14   14   16   19   21   24   26   29   31 
LCS_GDT     L     293     L     293      4    6   12     3    3    4    5    6    7    7    9    9   11   13   14   15   18   20   22   27   30   32   34 
LCS_GDT     V     294     V     294      4    6   12     3    4    4    5    6    7    7    9   11   11   13   15   17   18   21   22   27   29   32   34 
LCS_GDT     D     295     D     295      4    6   12     3    4    4    5    6    7    7    9   11   11   13   15   17   18   21   22   24   26   32   34 
LCS_GDT     D     296     D     296      4    6   12     3    4    4    4    5    6    7    9   11   11   13   15   17   18   21   22   24   26   29   34 
LCS_GDT     T     297     T     297      4    6   12     3    4    4    4    5    6    7    9   11   11   13   14   16   18   21   22   24   26   28   30 
LCS_GDT     L     298     L     298      3    4   12     3    3    4    4    4    5    6    9   11   11   13   15   17   18   21   22   24   26   28   30 
LCS_GDT     E     299     E     299      3    4   11     3    3    4    4    5    6    7    7    8   10   13   15   17   18   21   22   24   26   28   30 
LCS_GDT     R     300     R     300      3    4   11     0    3    4    4    5    6    7    9   11   11   13   15   17   18   21   22   24   26   28   30 
LCS_GDT     A     301     A     301      3    4   11     0    3    3    4    5    6    7    9   11   11   12   14   16   18   21   22   24   26   28   30 
LCS_GDT     G     302     G     302      3    4   11     3    3    3    4    5    6    7    9   11   11   12   14   16   18   21   22   24   26   28   30 
LCS_GDT     R     303     R     303      3    4   11     3    3    3    4    4    6    7    7    8   11   11   14   16   17   20   20   22   23   23   27 
LCS_GDT     I     304     I     304      3    4   11     3    3    3    4    4    4    7    7    8    9    9    9   16   17   18   18   18   21   22   25 
LCS_AVERAGE  LCS_A:  10.82  (   5.25    7.25   19.96 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      4      6      7      7      7     10     11     11     13     14     18     20     21     23     24     26     27     30     32     34 
GDT PERCENT_CA   5.48   8.22   9.59   9.59   9.59  13.70  15.07  15.07  17.81  19.18  24.66  27.40  28.77  31.51  32.88  35.62  36.99  41.10  43.84  46.58
GDT RMS_LOCAL    0.05   0.55   0.82   0.82   0.82   2.43   2.63   2.63   3.44   3.65   4.36   4.57   4.68   5.08   5.18   5.50   6.22   6.42   6.88   6.94
GDT RMS_ALL_CA  30.33  18.01  18.22  18.22  18.22  14.98  14.89  14.89  14.79  15.03  15.00  14.92  14.85  14.79  14.72  14.59  14.00  14.05  13.92  13.85

#      Molecule1      Molecule2       DISTANCE
LGA    N     228      N     228         13.572
LGA    N     229      N     229          7.190
LGA    S     230      S     230          2.641
LGA    L     231      L     231          2.002
LGA    P     232      P     232          2.571
LGA    N     233      N     233          8.170
LGA    P     234      P     234          8.415
LGA    H     235      H     235          8.381
LGA    L     236      L     236          2.166
LGA    R     237      R     237          4.574
LGA    K     238      K     238          2.849
LGA    D     239      D     239          6.405
LGA    S     240      S     240          8.724
LGA    N     241      N     241          7.017
LGA    N     242      N     242          2.292
LGA    P     243      P     243          2.586
LGA    A     244      A     244          2.355
LGA    L     245      L     245          2.518
LGA    H     246      H     246          6.283
LGA    F     247      F     247          8.506
LGA    E     248      E     248         12.717
LGA    W     249      W     249         16.606
LGA    E     250      E     250         12.593
LGA    I     251      I     251          7.223
LGA    I     252      I     252          8.180
LGA    H     253      H     253         12.299
LGA    A     254      A     254         12.798
LGA    F     255      F     255         17.071
LGA    G     256      G     256         19.440
LGA    K     257      K     257         21.281
LGA    D     258      D     258         27.230
LGA    P     271      P     271          8.178
LGA    I     272      I     272          8.867
LGA    S     273      S     273          6.331
LGA    V     274      V     274          3.477
LGA    V     275      V     275          3.141
LGA    D     276      D     276          8.635
LGA    K     277      K     277         10.235
LGA    E     278      E     278         12.803
LGA    R     279      R     279         13.061
LGA    F     280      F     280         13.600
LGA    S     281      S     281         17.533
LGA    K     282      K     282         18.978
LGA    Y     283      Y     283         20.086
LGA    H     284      H     284         25.487
LGA    D     285      D     285         29.869
LGA    N     286      N     286         25.367
LGA    Y     287      Y     287         23.426
LGA    Y     288      Y     288         21.529
LGA    P     289      P     289         20.947
LGA    G     290      G     290         14.541
LGA    W     291      W     291          9.232
LGA    Y     292      Y     292         12.830
LGA    L     293      L     293         11.257
LGA    V     294      V     294         13.412
LGA    D     295      D     295         16.324
LGA    D     296      D     296         17.038
LGA    T     297      T     297         20.837
LGA    L     298      L     298         22.464
LGA    E     299      E     299         20.983
LGA    R     300      R     300         19.038
LGA    A     301      A     301         23.884
LGA    G     302      G     302         22.060
LGA    R     303      R     303         20.680
LGA    I     304      I     304         23.374

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   65   73    4.0     11    2.63    17.123    14.706     0.403

LGA_LOCAL      RMSD =  2.632  Number of atoms =   11  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 14.885  Number of atoms =   65 
Std_ALL_ATOMS  RMSD = 12.695  (standard rmsd on all 65 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.637977 * X  +  -0.008994 * Y  +  -0.770002 * Z  +  29.624544
  Y_new =  -0.654854 * X  +  -0.519767 * Y  +   0.548643 * Z  +  26.732721
  Z_new =  -0.405156 * X  +   0.854261 * Y  +   0.325710 * Z  +   6.781926 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   1.206534   -1.935059  [ DEG:    69.1293   -110.8707 ]
  Theta =   0.417150    2.724443  [ DEG:    23.9009    156.0991 ]
  Phi   =  -2.343142    0.798451  [ DEG:  -134.2521     45.7479 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0320AL257_5-D2                               
REMARK     2: T0320_D2.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0320AL257_5-D2.T0320_D2.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   65   73   4.0   11   2.63  14.706    12.70
REMARK  ---------------------------------------------------------- 
MOLECULE T0320AL257_5-D2
REMARK Aligment from pdb entry: 1ru8_A
ATOM    605  N   ASN   228      18.889  15.993  12.519  1.00  0.00              
ATOM    606  CA  ASN   228      19.314  17.155  13.285  1.00  0.00              
ATOM    607  C   ASN   228      20.781  17.504  13.054  1.00  0.00              
ATOM    608  O   ASN   228      21.672  16.799  13.522  1.00  0.00              
ATOM    609  N   ASN   229      21.020  18.590  12.319  1.00  0.00              
ATOM    610  CA  ASN   229      22.377  19.039  12.055  1.00  0.00              
ATOM    611  C   ASN   229      22.918  18.760  10.670  1.00  0.00              
ATOM    612  O   ASN   229      24.066  19.096  10.374  1.00  0.00              
ATOM    613  N   SER   230      22.105  18.141   9.818  1.00  0.00              
ATOM    614  CA  SER   230      22.544  17.828   8.465  1.00  0.00              
ATOM    615  C   SER   230      22.179  18.953   7.516  1.00  0.00              
ATOM    616  O   SER   230      21.121  19.564   7.639  1.00  0.00              
ATOM    617  N   LEU   231      23.069  19.219   6.569  1.00  0.00              
ATOM    618  CA  LEU   231      22.863  20.258   5.580  1.00  0.00              
ATOM    619  C   LEU   231      21.906  19.716   4.529  1.00  0.00              
ATOM    620  O   LEU   231      22.060  18.579   4.080  1.00  0.00              
ATOM    621  N   PRO   232      20.919  20.519   4.140  1.00  0.00              
ATOM    622  CA  PRO   232      19.953  20.096   3.131  1.00  0.00              
ATOM    623  C   PRO   232      20.427  20.370   1.714  1.00  0.00              
ATOM    624  O   PRO   232      20.259  21.474   1.202  1.00  0.00              
ATOM    625  N   ASN   233      21.008  19.361   1.076  1.00  0.00              
ATOM    626  CA  ASN   233      21.475  19.494  -0.300  1.00  0.00              
ATOM    627  C   ASN   233      20.524  18.736  -1.216  1.00  0.00              
ATOM    628  O   ASN   233      19.418  18.395  -0.815  1.00  0.00              
ATOM    629  N   PRO   234      20.958  18.471  -2.441  1.00  0.00              
ATOM    630  CA  PRO   234      20.139  17.755  -3.419  1.00  0.00              
ATOM    631  C   PRO   234      19.701  16.401  -2.864  1.00  0.00              
ATOM    632  O   PRO   234      18.516  16.074  -2.844  1.00  0.00              
ATOM    633  N   HIS   235      20.674  15.621  -2.413  1.00  0.00              
ATOM    634  CA  HIS   235      20.408  14.314  -1.839  1.00  0.00              
ATOM    635  C   HIS   235      19.364  14.389  -0.744  1.00  0.00              
ATOM    636  O   HIS   235      18.467  13.553  -0.670  1.00  0.00              
ATOM    637  N   LEU   236      15.340  12.523  -0.292  1.00  0.00              
ATOM    638  CA  LEU   236      14.877  11.784   0.874  1.00  0.00              
ATOM    639  C   LEU   236      13.583  12.380   1.405  1.00  0.00              
ATOM    640  O   LEU   236      12.608  11.661   1.643  1.00  0.00              
ATOM    641  N   ARG   237      13.572  13.697   1.583  1.00  0.00              
ATOM    642  CA  ARG   237      12.381  14.384   2.077  1.00  0.00              
ATOM    643  C   ARG   237      11.183  14.176   1.158  1.00  0.00              
ATOM    644  O   ARG   237      10.043  14.183   1.616  1.00  0.00              
ATOM    645  N   LYS   238      11.445  14.005  -0.137  1.00  0.00              
ATOM    646  CA  LYS   238      10.376  13.776  -1.095  1.00  0.00              
ATOM    647  C   LYS   238       9.830  12.371  -0.893  1.00  0.00              
ATOM    648  O   LYS   238       8.617  12.144  -0.946  1.00  0.00              
ATOM    649  N   ASP   239      10.734  11.427  -0.660  1.00  0.00              
ATOM    650  CA  ASP   239      10.321  10.056  -0.444  1.00  0.00              
ATOM    651  C   ASP   239       9.579   9.948   0.883  1.00  0.00              
ATOM    652  O   ASP   239       8.477   9.404   0.934  1.00  0.00              
ATOM    653  N   SER   240      10.168  10.479   1.952  1.00  0.00              
ATOM    654  CA  SER   240       9.531  10.426   3.267  1.00  0.00              
ATOM    655  C   SER   240       8.157  11.079   3.219  1.00  0.00              
ATOM    656  O   SER   240       7.305  10.792   4.054  1.00  0.00              
ATOM    657  N   ASN   241       7.956  11.961   2.243  1.00  0.00              
ATOM    658  CA  ASN   241       6.687  12.661   2.064  1.00  0.00              
ATOM    659  C   ASN   241       5.711  11.729   1.343  1.00  0.00              
ATOM    660  O   ASN   241       4.516  11.702   1.640  1.00  0.00              
ATOM    661  N   ASN   242       6.248  10.968   0.393  1.00  0.00              
ATOM    662  CA  ASN   242       5.476  10.019  -0.387  1.00  0.00              
ATOM    663  C   ASN   242       5.126   8.784   0.424  1.00  0.00              
ATOM    664  O   ASN   242       4.474   7.874  -0.079  1.00  0.00              
ATOM    665  N   PRO   243       5.566   8.746   1.676  1.00  0.00              
ATOM    666  CA  PRO   243       5.275   7.611   2.545  1.00  0.00              
ATOM    667  C   PRO   243       4.544   8.071   3.804  1.00  0.00              
ATOM    668  O   PRO   243       3.355   7.795   3.983  1.00  0.00              
ATOM    669  N   ALA   244       5.266   8.777   4.673  1.00  0.00              
ATOM    670  CA  ALA   244       4.688   9.259   5.921  1.00  0.00              
ATOM    671  C   ALA   244       4.012  10.604   5.709  1.00  0.00              
ATOM    672  O   ALA   244       3.468  11.185   6.642  1.00  0.00              
ATOM    673  N   LEU   245       4.057  11.096   4.474  1.00  0.00              
ATOM    674  CA  LEU   245       3.421  12.366   4.133  1.00  0.00              
ATOM    675  C   LEU   245       3.982  13.548   4.937  1.00  0.00              
ATOM    676  O   LEU   245       3.229  14.318   5.541  1.00  0.00              
ATOM    677  N   HIS   246       5.309  13.676   4.943  1.00  0.00              
ATOM    678  CA  HIS   246       5.992  14.755   5.657  1.00  0.00              
ATOM    679  C   HIS   246       6.240  15.921   4.702  1.00  0.00              
ATOM    680  O   HIS   246       6.916  15.768   3.684  1.00  0.00              
ATOM    681  N   PHE   247       5.682  17.081   5.036  1.00  0.00              
ATOM    682  CA  PHE   247       5.814  18.279   4.219  1.00  0.00              
ATOM    683  C   PHE   247       7.286  18.563   3.920  1.00  0.00              
ATOM    684  O   PHE   247       8.081  18.814   4.824  1.00  0.00              
ATOM    685  N   GLU   248       7.639  18.533   2.640  1.00  0.00              
ATOM    686  CA  GLU   248       9.018  18.745   2.232  1.00  0.00              
ATOM    687  C   GLU   248       9.627  20.110   2.589  1.00  0.00              
ATOM    688  O   GLU   248      10.851  20.237   2.702  1.00  0.00              
ATOM    689  N   TRP   249       8.795  21.128   2.782  1.00  0.00              
ATOM    690  CA  TRP   249       9.320  22.446   3.134  1.00  0.00              
ATOM    691  C   TRP   249       9.268  22.680   4.637  1.00  0.00              
ATOM    692  O   TRP   249       9.544  23.781   5.114  1.00  0.00              
ATOM    693  N   GLU   250       8.919  21.638   5.380  1.00  0.00              
ATOM    694  CA  GLU   250       8.854  21.759   6.822  1.00  0.00              
ATOM    695  C   GLU   250       7.579  22.391   7.338  1.00  0.00              
ATOM    696  O   GLU   250       7.414  22.537   8.543  1.00  0.00              
ATOM    697  N   ILE   251       6.674  22.780   6.450  1.00  0.00              
ATOM    698  CA  ILE   251       5.418  23.380   6.893  1.00  0.00              
ATOM    699  C   ILE   251       4.703  22.462   7.891  1.00  0.00              
ATOM    700  O   ILE   251       4.580  21.254   7.672  1.00  0.00              
ATOM    701  N   ILE   252       4.235  23.043   8.990  1.00  0.00              
ATOM    702  CA  ILE   252       3.543  22.258   9.994  1.00  0.00              
ATOM    703  C   ILE   252       4.425  21.798  11.142  1.00  0.00              
ATOM    704  O   ILE   252       4.110  20.818  11.824  1.00  0.00              
ATOM    705  N   HIS   253       5.535  22.495  11.357  1.00  0.00              
ATOM    706  CA  HIS   253       6.430  22.129  12.440  1.00  0.00              
ATOM    707  C   HIS   253       7.287  20.906  12.161  1.00  0.00              
ATOM    708  O   HIS   253       8.047  20.470  13.024  1.00  0.00              
ATOM    709  N   ALA   254       7.146  20.344  10.963  1.00  0.00              
ATOM    710  CA  ALA   254       7.912  19.170  10.528  1.00  0.00              
ATOM    711  C   ALA   254       9.369  19.298  10.974  1.00  0.00              
ATOM    712  O   ALA   254       9.948  18.364  11.544  1.00  0.00              
ATOM    713  N   PHE   255       9.955  20.456  10.679  1.00  0.00              
ATOM    714  CA  PHE   255      11.320  20.736  11.058  1.00  0.00              
ATOM    715  C   PHE   255      11.677  22.217  10.974  1.00  0.00              
ATOM    716  O   PHE   255      11.006  22.999  10.297  1.00  0.00              
ATOM    717  N   GLY   256      12.737  22.604  11.673  1.00  0.00              
ATOM    718  CA  GLY   256      13.191  23.988  11.664  1.00  0.00              
ATOM    719  C   GLY   256      14.514  24.074  10.910  1.00  0.00              
ATOM    720  O   GLY   256      15.192  23.068  10.733  1.00  0.00              
ATOM    721  N   LYS   257      14.881  25.268  10.454  1.00  0.00              
ATOM    722  CA  LYS   257      16.140  25.418   9.733  1.00  0.00              
ATOM    723  C   LYS   257      16.960  26.651  10.125  1.00  0.00              
ATOM    724  O   LYS   257      16.470  27.578  10.781  1.00  0.00              
ATOM    725  N   ASP   258      18.224  26.642   9.716  1.00  0.00              
ATOM    726  CA  ASP   258      19.141  27.742   9.974  1.00  0.00              
ATOM    727  C   ASP   258      20.056  27.891   8.758  1.00  0.00              
ATOM    728  O   ASP   258      20.827  26.992   8.426  1.00  0.00              
ATOM    729  N   PRO   271      19.948  29.031   8.089  1.00  0.00              
ATOM    730  CA  PRO   271      20.746  29.296   6.911  1.00  0.00              
ATOM    731  C   PRO   271      22.149  29.681   7.338  1.00  0.00              
ATOM    732  O   PRO   271      22.360  30.715   7.988  1.00  0.00              
ATOM    733  N   ILE   272      23.102  28.831   6.973  1.00  0.00              
ATOM    734  CA  ILE   272      24.494  29.049   7.305  1.00  0.00              
ATOM    735  C   ILE   272      25.162  29.945   6.278  1.00  0.00              
ATOM    736  O   ILE   272      26.012  30.764   6.629  1.00  0.00              
ATOM    737  N   SER   273      24.782  29.787   5.012  1.00  0.00              
ATOM    738  CA  SER   273      25.355  30.602   3.942  1.00  0.00              
ATOM    739  C   SER   273      24.337  30.925   2.867  1.00  0.00              
ATOM    740  O   SER   273      23.323  30.241   2.718  1.00  0.00              
ATOM    741  N   VAL   274      24.631  31.972   2.113  1.00  0.00              
ATOM    742  CA  VAL   274      23.759  32.420   1.045  1.00  0.00              
ATOM    743  C   VAL   274      24.446  33.506   0.230  1.00  0.00              
ATOM    744  O   VAL   274      25.252  34.270   0.751  1.00  0.00              
ATOM    745  N   VAL   275      24.112  33.607  -1.063  1.00  0.00              
ATOM    746  CA  VAL   275      24.738  34.628  -1.910  1.00  0.00              
ATOM    747  C   VAL   275      24.872  36.040  -1.307  1.00  0.00              
ATOM    748  O   VAL   275      25.860  36.722  -1.583  1.00  0.00              
ATOM    749  N   ASP   276      23.905  36.477  -0.495  1.00  0.00              
ATOM    750  CA  ASP   276      23.998  37.802   0.107  1.00  0.00              
ATOM    751  C   ASP   276      24.927  37.802   1.318  1.00  0.00              
ATOM    752  O   ASP   276      25.531  38.827   1.625  1.00  0.00              
ATOM    753  N   LYS   277      25.057  36.669   2.011  1.00  0.00              
ATOM    754  CA  LYS   277      25.955  36.631   3.160  1.00  0.00              
ATOM    755  C   LYS   277      27.345  37.046   2.699  1.00  0.00              
ATOM    756  O   LYS   277      27.881  36.478   1.744  1.00  0.00              
ATOM    757  N   GLU   278      27.924  38.035   3.375  1.00  0.00              
ATOM    758  CA  GLU   278      29.261  38.515   3.048  1.00  0.00              
ATOM    759  C   GLU   278      30.281  37.621   3.771  1.00  0.00              
ATOM    760  O   GLU   278      31.465  37.598   3.444  1.00  0.00              
ATOM    761  N   ARG   279      29.781  36.882   4.759  1.00  0.00              
ATOM    762  CA  ARG   279      30.572  35.934   5.531  1.00  0.00              
ATOM    763  C   ARG   279      29.756  34.640   5.621  1.00  0.00              
ATOM    764  O   ARG   279      28.519  34.663   5.620  1.00  0.00              
ATOM    765  N   PHE   280      30.473  33.528   5.714  1.00  0.00              
ATOM    766  CA  PHE   280      29.899  32.194   5.823  1.00  0.00              
ATOM    767  C   PHE   280      29.889  31.845   7.313  1.00  0.00              
ATOM    768  O   PHE   280      30.833  32.179   8.025  1.00  0.00              
ATOM    769  N   SER   281      28.815  31.210   7.785  1.00  0.00              
ATOM    770  CA  SER   281      28.728  30.815   9.186  1.00  0.00              
ATOM    771  C   SER   281      29.196  29.378   9.251  1.00  0.00              
ATOM    772  O   SER   281      28.859  28.587   8.375  1.00  0.00              
ATOM    773  N   LYS   282      29.966  29.041  10.278  1.00  0.00              
ATOM    774  CA  LYS   282      30.482  27.685  10.443  1.00  0.00              
ATOM    775  C   LYS   282      30.233  27.251  11.879  1.00  0.00              
ATOM    776  O   LYS   282      30.686  27.902  12.810  1.00  0.00              
ATOM    777  N   TYR   283      29.487  26.167  12.044  1.00  0.00              
ATOM    778  CA  TYR   283      29.140  25.630  13.364  1.00  0.00              
ATOM    779  C   TYR   283      30.301  24.779  13.875  1.00  0.00              
ATOM    780  O   TYR   283      30.757  23.860  13.196  1.00  0.00              
ATOM    781  N   HIS   284      30.770  25.079  15.080  1.00  0.00              
ATOM    782  CA  HIS   284      31.896  24.352  15.645  1.00  0.00              
ATOM    783  C   HIS   284      31.493  23.264  16.639  1.00  0.00              
ATOM    784  O   HIS   284      32.029  22.156  16.604  1.00  0.00              
ATOM    785  N   ASP   285      19.387  17.445  21.350  1.00  0.00              
ATOM    786  CA  ASP   285      18.567  16.723  22.319  1.00  0.00              
ATOM    787  C   ASP   285      17.292  16.199  21.662  1.00  0.00              
ATOM    788  O   ASP   285      16.342  16.947  21.439  1.00  0.00              
ATOM    789  N   ASN   286      17.275  14.907  21.354  1.00  0.00              
ATOM    790  CA  ASN   286      16.118  14.310  20.700  1.00  0.00              
ATOM    791  C   ASN   286      15.258  13.519  21.688  1.00  0.00              
ATOM    792  O   ASN   286      15.691  13.182  22.793  1.00  0.00              
ATOM    793  N   TYR   287      14.023  13.253  21.281  1.00  0.00              
ATOM    794  CA  TYR   287      13.082  12.502  22.095  1.00  0.00              
ATOM    795  C   TYR   287      12.654  11.279  21.282  1.00  0.00              
ATOM    796  O   TYR   287      12.071  11.413  20.204  1.00  0.00              
ATOM    797  N   TYR   288      12.951  10.070  21.787  1.00  0.00              
ATOM    798  CA  TYR   288      12.606   8.811  21.116  1.00  0.00              
ATOM    799  C   TYR   288      11.100   8.571  20.968  1.00  0.00              
ATOM    800  O   TYR   288      10.596   8.406  19.852  1.00  0.00              
ATOM    801  N   PRO   289      10.393   8.553  22.099  1.00  0.00              
ATOM    802  CA  PRO   289       8.946   8.327  22.122  1.00  0.00              
ATOM    803  C   PRO   289       8.205   9.057  20.992  1.00  0.00              
ATOM    804  O   PRO   289       7.407   8.451  20.274  1.00  0.00              
ATOM    805  N   GLY   290       8.471  10.352  20.837  1.00  0.00              
ATOM    806  CA  GLY   290       7.838  11.141  19.783  1.00  0.00              
ATOM    807  C   GLY   290       8.885  11.388  18.703  1.00  0.00              
ATOM    808  O   GLY   290       9.719  10.526  18.431  1.00  0.00              
ATOM    809  N   TRP   291       8.834  12.559  18.079  1.00  0.00              
ATOM    810  CA  TRP   291       9.815  12.911  17.062  1.00  0.00              
ATOM    811  C   TRP   291      10.483  14.213  17.482  1.00  0.00              
ATOM    812  O   TRP   291      11.409  14.686  16.824  1.00  0.00              
ATOM    813  N   TYR   292      10.007  14.777  18.589  1.00  0.00              
ATOM    814  CA  TYR   292      10.538  16.028  19.122  1.00  0.00              
ATOM    815  C   TYR   292      12.063  16.002  19.247  1.00  0.00              
ATOM    816  O   TYR   292      12.622  15.230  20.028  1.00  0.00              
ATOM    817  N   LEU   293      12.723  16.859  18.474  1.00  0.00              
ATOM    818  CA  LEU   293      14.171  16.938  18.502  1.00  0.00              
ATOM    819  C   LEU   293      14.631  18.375  18.376  1.00  0.00              
ATOM    820  O   LEU   293      13.843  19.257  18.032  1.00  0.00              
ATOM    821  N   VAL   294      15.908  18.622  18.642  1.00  0.00              
ATOM    822  CA  VAL   294      16.428  19.976  18.561  1.00  0.00              
ATOM    823  C   VAL   294      17.948  20.017  18.642  1.00  0.00              
ATOM    824  O   VAL   294      18.553  19.365  19.491  1.00  0.00              
ATOM    825  N   ASP   295      18.562  20.780  17.743  1.00  0.00              
ATOM    826  CA  ASP   295      20.017  20.920  17.711  1.00  0.00              
ATOM    827  C   ASP   295      20.406  22.262  18.327  1.00  0.00              
ATOM    828  O   ASP   295      19.933  23.310  17.888  1.00  0.00              
ATOM    829  N   ASP   296      21.253  22.233  19.351  1.00  0.00              
ATOM    830  CA  ASP   296      21.688  23.470  19.993  1.00  0.00              
ATOM    831  C   ASP   296      23.115  23.816  19.574  1.00  0.00              
ATOM    832  O   ASP   296      24.055  23.074  19.859  1.00  0.00              
ATOM    833  N   THR   297      23.270  24.937  18.876  1.00  0.00              
ATOM    834  CA  THR   297      24.589  25.378  18.437  1.00  0.00              
ATOM    835  C   THR   297      25.301  25.985  19.665  1.00  0.00              
ATOM    836  O   THR   297      24.885  27.028  20.184  1.00  0.00              
ATOM    837  N   LEU   298      26.364  25.331  20.127  1.00  0.00              
ATOM    838  CA  LEU   298      27.102  25.812  21.293  1.00  0.00              
ATOM    839  C   LEU   298      28.234  26.747  20.877  1.00  0.00              
ATOM    840  O   LEU   298      28.547  27.714  21.573  1.00  0.00              
ATOM    841  N   GLU   299      28.824  26.454  19.723  1.00  0.00              
ATOM    842  CA  GLU   299      29.921  27.246  19.174  1.00  0.00              
ATOM    843  C   GLU   299      29.893  27.351  17.644  1.00  0.00              
ATOM    844  O   GLU   299      29.765  26.342  16.951  1.00  0.00              
ATOM    845  N   ARG   300      30.024  28.581  17.139  1.00  0.00              
ATOM    846  CA  ARG   300      30.034  28.882  15.703  1.00  0.00              
ATOM    847  C   ARG   300      30.800  30.181  15.447  1.00  0.00              
ATOM    848  O   ARG   300      30.928  31.029  16.334  1.00  0.00              
ATOM    849  N   ALA   301      31.294  30.347  14.226  1.00  0.00              
ATOM    850  CA  ALA   301      32.043  31.551  13.875  1.00  0.00              
ATOM    851  C   ALA   301      31.836  31.882  12.406  1.00  0.00              
ATOM    852  O   ALA   301      31.346  31.051  11.649  1.00  0.00              
ATOM    853  N   GLY   302      32.250  33.085  12.019  1.00  0.00              
ATOM    854  CA  GLY   302      32.141  33.561  10.650  1.00  0.00              
ATOM    855  C   GLY   302      33.490  33.438   9.928  1.00  0.00              
ATOM    856  O   GLY   302      34.542  33.674  10.522  1.00  0.00              
ATOM    857  N   ARG   303      33.454  33.044   8.658  1.00  0.00              
ATOM    858  CA  ARG   303      34.655  32.918   7.838  1.00  0.00              
ATOM    859  C   ARG   303      34.457  33.763   6.593  1.00  0.00              
ATOM    860  O   ARG   303      33.445  33.646   5.891  1.00  0.00              
ATOM    861  N   ILE   304      35.434  34.608   6.311  1.00  0.00              
ATOM    862  CA  ILE   304      35.353  35.494   5.162  1.00  0.00              
ATOM    863  C   ILE   304      35.170  34.796   3.829  1.00  0.00              
ATOM    864  O   ILE   304      35.513  33.635   3.661  1.00  0.00              
END
