
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  155 (  155),  selected  148 , name T0321TS168_1-D2
# Molecule2: number of CA atoms  148 ( 1130),  selected  148 , name T0321_D2.pdb
# PARAMETERS: T0321TS168_1-D2.T0321_D2.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    37       181 - 217         4.96    16.38
  LONGEST_CONTINUOUS_SEGMENT:    37       182 - 218         4.94    16.42
  LONGEST_CONTINUOUS_SEGMENT:    37       183 - 219         4.99    16.44
  LCS_AVERAGE:     18.27

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    16       219 - 234         1.91    18.91
  LCS_AVERAGE:      5.65

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    11       181 - 191         0.98    20.45
  LONGEST_CONTINUOUS_SEGMENT:    11       224 - 234         0.71    25.89
  LCS_AVERAGE:      3.66

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  148
LCS_GDT     V      97     V      97      3    4    6     3    3    3    3    4    8    8    9    9   10   10   11   20   24   26   29   32   35   36   40 
LCS_GDT     I      98     I      98      3    4    6     3    3    3    3    4    4    6    7    8    9   18   19   23   25   28   32   37   44   52   58 
LCS_GDT     F      99     F      99      3    4   16     3    3    3    3    4    4    6    7    8   10   18   19   23   25   28   34   37   44   48   58 
LCS_GDT     S     100     S     100      3    5   16     3    3    3    3    5    6    9   11   12   12   18   19   23   25   28   34   41   43   48   52 
LCS_GDT     D     101     D     101      3    5   16     3    3    4    5    7    8    9   11   12   12   13   23   25   26   31   35   41   45   50   52 
LCS_GDT     A     102     A     102      3    5   16     3    3    3    5    7    8    9   11   12   12   13   16   25   26   27   29   38   45   50   52 
LCS_GDT     N     110     N     110      3    6   16     1    3    4    8   10   12   15   18   20   23   25   28   32   35   39   43   46   49   51   54 
LCS_GDT     D     111     D     111      5    6   16     4    5    5    5    5    7    9   11   15   19   21   27   32   35   38   43   46   49   51   53 
LCS_GDT     P     112     P     112      5    6   16     4    5    5    5    7    8    9   11   13   15   19   23   29   35   38   43   46   49   51   53 
LCS_GDT     F     113     F     113      5    6   16     4    5    5    5    5    7    9   11   13   15   16   18   29   35   35   39   45   49   51   54 
LCS_GDT     I     114     I     114      5    6   16     4    5    5    5    7    8    9   11   12   15   18   23   29   35   38   43   46   49   51   54 
LCS_GDT     M     115     M     115      5    6   16     4    5    5    5    5    8    9   11   13   15   20   25   30   35   38   43   46   49   51   53 
LCS_GDT     S     116     S     116      3    6   16     3    3    4    4    7    8    9   11   13   15   16   18   29   35   35   39   43   48   50   53 
LCS_GDT     Q     117     Q     117      3    5   16     3    3    4    4    7    8    9   11   12   12   16   18   21   22   27   36   41   45   49   52 
LCS_GDT     N     118     N     118      3    5   16     3    3    4    5    7    8    9   11   13   16   21   28   32   36   39   43   46   49   51   54 
LCS_GDT     E     119     E     119      3    4   18     3    3    4    4    5    7    9   11   16   20   23   28   32   36   39   43   46   49   51   54 
LCS_GDT     V     120     V     120      3    4   18     3    3    4    4    5    7    9   11   13   15   21   28   32   36   39   43   46   51   62   70 
LCS_GDT     K     121     K     121      3    4   18     3    3    4    8    9   12   15   18   19   26   29   34   42   50   58   64   67   73   76   79 
LCS_GDT     G     122     G     122      3    6   18     3    3    5    6    7    8    9   14   19   26   32   39   47   54   61   64   69   73   76   80 
LCS_GDT     K     123     K     123      3    6   23     0    3    5    6    7    8   10   14   16   19   23   29   34   47   50   58   66   73   76   80 
LCS_GDT     K     124     K     124      3    6   25     3    3    5    6    7    8   12   15   18   21   25   29   34   37   48   57   63   69   75   80 
LCS_GDT     V     125     V     125      4    6   25     3    3    4    5    8   10   12   17   19   21   25   29   34   42   54   59   65   70   76   80 
LCS_GDT     G     126     G     126      4    6   25     3    3    5    5    9   10   13   16   18   23   26   28   32   38   41   45   57   64   69   73 
LCS_GDT     V     127     V     127      4    6   25     3    3    4    5    7    8   10   16   17   23   25   27   32   38   41   45   48   64   67   73 
LCS_GDT     V     128     V     128      4    6   25     3    3    4    5    6    8    9   14   14   18   23   24   27   30   39   41   44   47   50   55 
LCS_GDT     G     129     G     129      3    6   25     3    3    4    5    7    9   12   16   20   20   24   28   31   36   39   43   46   49   51   55 
LCS_GDT     H     130     H     130      3    5   25     3    3    8    8   10   12   15   19   20   23   25   28   32   36   42   53   57   64   69   73 
LCS_GDT     F     131     F     131      3    5   25     3    3    3    8    9   12   15   18   20   23   25   28   32   36   39   43   52   64   69   74 
LCS_GDT     P     132     P     132      3    5   25     3    3    5    8   10   12   15   19   20   23   25   29   39   49   52   64   67   70   72   75 
LCS_GDT     H     133     H     133      3    5   25     3    3    5    8   10   12   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     134     L     134      4    5   25     3    4    5    8   10   12   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     E     135     E     135      4    5   25     3    4    4    5    7    9   13   17   30   34   37   41   49   55   61   64   69   73   76   80 
LCS_GDT     S     136     S     136      4    5   25     3    4    6    7   10   12   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     137     L     137      4    5   25     3    4    4    7   11   13   15   20   25   29   34   41   47   55   61   64   69   73   76   80 
LCS_GDT     L     138     L     138      4    5   25     3    3    4    6   11   13   15   18   21   26   30   38   47   54   61   64   69   73   76   80 
LCS_GDT     E     139     E     139      4    5   25     3    3    4    6   11   13   15   18   25   28   34   40   47   54   61   64   69   73   76   80 
LCS_GDT     P     140     P     140      5    6   25     3    4    5    7   10   13   17   22   25   28   30   36   45   54   58   64   69   73   76   79 
LCS_GDT     I     141     I     141      5    7   25     3    4    5    7    8   13   16   19   20   24   28   35   42   44   50   58   62   68   72   76 
LCS_GDT     C     142     C     142      5    9   25     3    4    5    7    8   13   17   22   25   28   30   36   45   51   57   64   69   73   76   79 
LCS_GDT     D     143     D     143      5    9   25     3    4    5    8   10   12   15   19   20   23   25   29   37   49   54   61   68   73   76   80 
LCS_GDT     L     144     L     144      5    9   25     3    4    5    8   10   12   15   19   24   30   36   41   48   55   61   64   69   73   76   80 
LCS_GDT     S     145     S     145      4    9   25     2    4    5    8   10   12   15   19   20   24   27   32   41   46   54   60   65   70   76   80 
LCS_GDT     I     146     I     146      4    9   25     3    3    4    6    8   10   15   19   20   24   27   32   37   43   49   58   63   68   73   80 
LCS_GDT     L     147     L     147      4    9   25     3    4    5    6    8   12   15   19   20   23   27   29   32   36   39   44   54   58   64   72 
LCS_GDT     E     148     E     148      4    9   25     3    4    5    8   10   12   15   19   20   23   25   28   32   36   39   43   46   50   57   66 
LCS_GDT     W     149     W     149      4    9   25     3    4    4    8   10   12   15   19   20   23   25   28   32   36   39   43   46   49   51   54 
LCS_GDT     S     150     S     150      4    9   25     3    4    4    6    8   12   15   18   20   23   25   28   32   36   39   42   46   49   51   54 
LCS_GDT     P     151     P     151      4    5   23     3    3    4    5    7    9   11   15   17   19   22   25   26   29   33   40   44   46   50   53 
LCS_GDT     E     152     E     152      4    5   21     3    3    4    5    7    9   11   15   17   19   22   25   26   29   33   36   38   41   45   51 
LCS_GDT     E     153     E     153      5    6   21     3    3    5    7    9   11   12   15   17   19   22   25   26   29   33   36   38   41   45   48 
LCS_GDT     G     154     G     154      5    6   21     4    4    6    7    8    9   10   13   15   19   22   25   26   29   33   36   38   41   45   48 
LCS_GDT     D     155     D     155      5    6   21     4    4    6    7    8   10   12   15   17   19   22   25   26   29   33   36   38   41   45   51 
LCS_GDT     Y     156     Y     156      5    6   22     4    4    6    7    8   10   12   15   17   19   22   25   26   29   33   34   38   42   46   51 
LCS_GDT     P     157     P     157      5    6   22     4    4    6    7    8    9   11   15   19   20   23   25   26   28   31   34   38   42   46   51 
LCS_GDT     L     158     L     158      4    7   22     4    4    6    7    8   11   13   16   19   21   23   25   26   28   36   40   44   46   50   53 
LCS_GDT     P     159     P     159      6    7   22     4    4    6    7    8   11   13   16   19   21   23   25   31   35   37   40   44   46   50   53 
LCS_GDT     A     160     A     160      6    7   22     5    5    6    7    8   11   13   16   19   21   23   25   28   33   37   40   44   45   50   53 
LCS_GDT     S     161     S     161      6    7   22     5    5    6    7    8   11   15   17   19   23   25   28   32   35   39   42   46   48   51   53 
LCS_GDT     E     162     E     162      6    7   22     5    5    6    7    8   12   15   17   18   23   25   28   32   36   39   43   46   49   51   53 
LCS_GDT     F     163     F     163      6    7   22     5    5    6    7    8    9   11   15   19   21   23   28   31   36   39   43   45   47   50   53 
LCS_GDT     I     164     I     164      6    7   22     5    5    6    7    9   12   15   17   19   23   25   28   32   36   39   43   48   58   66   72 
LCS_GDT     L     165     L     165      4    6   27     3    4    4    8    9   12   15   17   20   28   32   37   41   46   57   64   67   70   75   80 
LCS_GDT     P     166     P     166      4    6   28     3    4    4    7    9   10   14   17   19   23   27   30   37   44   52   59   64   69   75   80 
LCS_GDT     E     167     E     167      4    6   30     3    4    4    7    9   13   18   22   30   34   37   41   49   55   61   64   69   73   76   80 
LCS_GDT     C     168     C     168      4    7   30     3    4    4    7    9   12   16   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     D     169     D     169      3    7   30     3    3    4    5    8   11   14   16   20   22   27   38   45   53   61   64   69   73   76   80 
LCS_GDT     Y     170     Y     170      5    7   30     3    4    5    7    8   10   14   22   30   34   37   41   49   55   61   64   69   73   76   80 
LCS_GDT     V     171     V     171      5    7   30     4    4    5    7    8   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     Y     172     Y     172      5    7   30     4    4    5    7    9   11   18   20   28   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     I     173     I     173      5    7   30     4    4    5    7    8   11   13   16   19   26   29   37   42   50   57   64   67   73   76   80 
LCS_GDT     T     174     T     174      5    8   30     4    4    5    7    8   11   13   16   19   24   27   34   43   50   57   62   67   73   76   80 
LCS_GDT     C     175     C     175      7    8   30     4    6    7    9   10   12   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     A     176     A     176      7    8   30     6    6    7    8    8   10   13   15   18   24   28   36   43   48   54   61   66   73   76   80 
LCS_GDT     S     177     S     177      7    8   30     6    6    7    9   10   11   14   15   18   24   32   40   47   54   60   64   69   73   76   80 
LCS_GDT     V     178     V     178      7    8   30     6    6    7    8    9   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     V     179     V     179      7   13   30     6    6    7    8   12   12   13   14   15   17   19   27   32   40   53   58   67   73   76   80 
LCS_GDT     D     180     D     180      7   13   33     6    6    7    8    8   10   12   14   15   17   22   26   31   37   44   56   64   69   73   79 
LCS_GDT     K     181     K     181     11   13   37     6    6   11   11   12   12   14   16   20   28   36   41   50   55   61   64   69   73   76   80 
LCS_GDT     T     182     T     182     11   13   37     4    9   11   11   12   12   14   20   24   29   36   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     183     L     183     11   13   37     8    9   11   11   12   12   13   15   20   26   36   41   50   55   61   64   69   73   76   80 
LCS_GDT     P     184     P     184     11   13   37     8    9   11   11   12   12   15   20   28   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     R     185     R     185     11   13   37     8    9   11   11   12   13   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     186     L     186     11   13   37     8    9   11   11   12   12   14   20   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     187     L     187     11   13   37     8    9   11   11   12   13   16   20   24   30   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     E     188     E     188     11   13   37     8    9   11   11   12   13   16   20   26   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     189     L     189     11   13   37     8    9   11   11   12   13   16   20   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     S     190     S     190     11   13   37     8    9   11   11   12   13   16   20   24   28   34   41   50   55   61   64   69   73   76   80 
LCS_GDT     R     191     R     191     11   13   37     3    5   11   11   12   12   16   20   24   28   34   41   50   55   61   64   69   73   76   80 
LCS_GDT     N     192     N     192      4    6   37     3    4    5    9   10   12   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     A     193     A     193      4    6   37     3    4    4    7   10   12   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     R     194     R     194      4    9   37     3    4    4    7    9   12   17   22   25   28   34   40   46   55   61   64   69   73   76   80 
LCS_GDT     R     195     R     195      3    9   37     3    4    5    7   10   13   17   22   25   30   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     I     196     I     196      3    9   37     3    4    7    9   10   13   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     T     197     T     197      3    9   37     3    3    6    9   11   13   16   22   26   31   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     198     L     198      3    9   37     3    4    6    7   11   13   16   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     V     199     V     199      4    9   37     3    4    7    9   10   13   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     G     200     G     200      4    9   37     3    4    7    9   10   13   17   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     P     201     P     201      4    9   37     3    4    7    9   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     G     202     G     202      4    9   37     3    4    7    9   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     T     203     T     203      4    6   37     3    3    5    6    9   13   18   21   28   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     P     204     P     204      4    6   37     3    3    4    7    9   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     205     L     205      4    8   37     3    3    4    6    9   12   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     A     206     A     206      7    8   37     3    4    8    8   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     P     207     P     207      7    8   37     3    4    8    8   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     V     208     V     208      7    8   37     3    5    8    8   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     L     209     L     209      7    8   37     4    5    8    8    9   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     F     210     F     210      7    8   37     4    5    8    8   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     E     211     E     211      7    8   37     4    5    8    8   10   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     H     212     H     212      7    8   37     4    5    8    8    9   13   18   22   30   34   37   41   50   55   61   64   69   73   76   80 
LCS_GDT     G     213     G     213      4    6   37     3    4    4    7    9   13   16   21   25   28   30   37   46   54   60   64   69   72   76   80 
LCS_GDT     L     214     L     214      4    6   37     3    4    4    5    7   10   13   17   25   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     Q     215     Q     215      4    6   37     3    4    4    5    7   11   13   17   22   25   30   40   46   54   60   64   69   72   76   80 
LCS_GDT     E     216     E     216      4    8   37     3    4    4    6    9   12   15   18   22   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     L     217     L     217      4    8   37     3    4    5    6   10   12   16   19   24   28   34   41   50   55   61   64   69   73   76   80 
LCS_GDT     S     218     S     218      4    8   37     3    3    4    8   12   14   16   18   22   27   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     G     219     G     219      4   16   37     3    3    6   12   14   15   16   18   19   23   30   37   45   54   60   64   69   73   76   80 
LCS_GDT     F     220     F     220      4   16   35     3    3    4   12   14   15   16   18   19   24   30   38   43   54   60   63   69   73   76   80 
LCS_GDT     M     221     M     221      4   16   35     3    3    8   12   14   15   16   18   24   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     V     222     V     222      4   16   35     3    3    8   12   14   15   16   18   22   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     K     223     K     223      3   16   35     3    3    4    7   14   15   16   18   19   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     D     224     D     224     11   16   35     3    4   11   11   11   15   16   18   22   25   30   37   48   55   61   64   69   73   76   80 
LCS_GDT     N     225     N     225     11   16   35    10   10   11   11   14   15   16   20   24   30   35   41   50   55   61   64   69   73   76   80 
LCS_GDT     A     226     A     226     11   16   35    10   10   11   12   14   15   16   18   19   28   34   40   50   55   61   64   69   72   76   80 
LCS_GDT     R     227     R     227     11   16   26    10   10   11   12   14   15   16   18   19   23   33   39   48   54   60   64   69   73   76   80 
LCS_GDT     A     228     A     228     11   16   26    10   10   11   12   14   15   16   18   22   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     F     229     F     229     11   16   26    10   10   11   12   14   15   16   18   22   28   34   40   50   55   61   64   69   73   76   80 
LCS_GDT     R     230     R     230     11   16   26    10   10   11   12   14   15   16   18   19   21   24   30   44   54   57   63   67   70   73   79 
LCS_GDT     I     231     I     231     11   16   26    10   10   11   12   14   15   16   18   19   21   23   29   35   41   56   60   66   70   73   79 
LCS_GDT     V     232     V     232     11   16   26    10   10   11   12   14   15   16   18   19   21   28   37   48   54   59   64   69   72   76   80 
LCS_GDT     A     233     A     233     11   16   26    10   10   11   12   14   15   16   18   19   21   24   29   44   54   57   63   67   70   73   79 
LCS_GDT     G     234     G     234     11   16   26    10   10   11   11   14   15   16   17   19   21   23   25   32   35   46   51   57   64   69   74 
LCS_GDT     A     235     A     235      4   11   26     3    4    4    4    5    5    6   10   13   13   13   18   22   24   25   29   31   34   38   44 
LCS_GDT     E     236     E     236      4    5   26     3    4    4    4    5    5    7    8   10   17   21   24   25   27   32   37   41   48   51   61 
LCS_GDT     K     237     K     237      4    5   26     3    4    4    5    8   12   14   16   17   20   23   25   31   38   44   50   60   67   70   73 
LCS_GDT     V     238     V     238      3    4   26     3    3    3    4    4    6   11   16   17   19   23   25   30   36   41   47   54   59   69   72 
LCS_GDT     K     239     K     239      4    5   26     3    3    4    4    4    6    7   10   13   17   21   24   29   36   41   47   54   60   69   72 
LCS_GDT     I     240     I     240      4    5   25     3    3    4    4    5    7   10   12   12   13   17   21   27   30   33   42   47   49   57   67 
LCS_GDT     Y     241     Y     241      4    5   17     3    3    4    4    5    8   10   12   12   12   14   16   19   22   27   29   37   42   49   62 
LCS_GDT     S     242     S     242      4    9   17     1    4    5    6    8    8   10   12   12   12   14   15   18   21   26   30   37   41   43   45 
LCS_GDT     A     243     A     243      4    9   17     3    4    6    8    9    9   10   12   12   12   14   15   18   21   23   25   26   27   29   33 
LCS_GDT     G     244     G     244      4    9   17     3    4    6    8    9    9   10   12   12   12   14   15   18   21   23   25   26   33   36   37 
LCS_GDT     Q     245     Q     245      4    9   17     3    4    4    7    9    9   10   12   12   12   16   20   21   23   26   30   32   34   36   42 
LCS_GDT     K     246     K     246      6    9   17     4    5    6    8    9    9   10   13   15   17   20   24   26   29   33   33   36   40   45   48 
LCS_GDT     V     247     V     247      6    9   15     4    5    6    8    9   11   12   13   16   21   23   25   26   29   33   34   36   41   45   49 
LCS_GDT     T     248     T     248      6    9   15     4    5    6    8    9    9   10   12   16   18   20   25   26   29   33   34   35   41   45   48 
LCS_GDT     I     249     I     249      6    9   15     3    5    6    8    9    9   10   12   12   12   15   19   23   25   29   32   35   38   41   43 
LCS_GDT     K     250     K     250      6    9   15     4    5    6    8    9    9   10   12   12   12   14   15   22   24   24   27   30   36   39   40 
LCS_GDT     K     251     K     251      6    9   15     0    5    6    8    9    9   10   12   12   12   12   13   16   17   19   20   22   22   28   30 
LCS_AVERAGE  LCS_A:   9.19  (   3.66    5.65   18.27 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     10     10     11     12     14     15     18     22     30     34     37     41     50     55     61     64     69     73     76     80 
GDT PERCENT_CA   6.76   6.76   7.43   8.11   9.46  10.14  12.16  14.86  20.27  22.97  25.00  27.70  33.78  37.16  41.22  43.24  46.62  49.32  51.35  54.05
GDT RMS_LOCAL    0.25   0.25   0.71   1.40   1.61   1.76   2.71   2.99   3.67   3.82   4.03   4.30   5.03   5.17   5.52   5.66   5.93   6.24   6.32   6.67
GDT RMS_ALL_CA  25.02  25.02  25.89  18.91  19.04  19.01  16.94  16.79  16.56  16.58  16.54  16.50  16.34  16.39  16.33  16.34  16.32  16.30  16.32  16.37

#      Molecule1      Molecule2       DISTANCE
LGA    V      97      V      97         25.759
LGA    I      98      I      98         18.946
LGA    F      99      F      99         18.673
LGA    S     100      S     100         21.476
LGA    D     101      D     101         26.605
LGA    A     102      A     102         24.550
LGA    N     110      N     110         21.618
LGA    D     111      D     111         23.618
LGA    P     112      P     112         25.132
LGA    F     113      F     113         21.052
LGA    I     114      I     114         19.511
LGA    M     115      M     115         23.524
LGA    S     116      S     116         23.319
LGA    Q     117      Q     117         21.121
LGA    N     118      N     118         18.871
LGA    E     119      E     119         17.840
LGA    V     120      V     120         14.455
LGA    K     121      K     121          8.209
LGA    G     122      G     122          8.671
LGA    K     123      K     123         11.615
LGA    K     124      K     124         13.709
LGA    V     125      V     125         12.281
LGA    G     126      G     126         16.559
LGA    V     127      V     127         15.564
LGA    V     128      V     128         20.511
LGA    G     129      G     129         21.643
LGA    H     130      H     130         19.988
LGA    F     131      F     131         18.841
LGA    P     132      P     132         16.423
LGA    H     133      H     133         11.159
LGA    L     134      L     134          9.487
LGA    E     135      E     135         11.777
LGA    S     136      S     136          8.200
LGA    L     137      L     137          4.494
LGA    L     138      L     138          5.864
LGA    E     139      E     139          4.580
LGA    P     140      P     140          2.794
LGA    I     141      I     141          6.917
LGA    C     142      C     142          3.743
LGA    D     143      D     143          7.293
LGA    L     144      L     144          8.375
LGA    S     145      S     145         11.562
LGA    I     146      I     146         12.771
LGA    L     147      L     147         17.284
LGA    E     148      E     148         21.452
LGA    W     149      W     149         26.444
LGA    S     150      S     150         30.315
LGA    P     151      P     151         32.754
LGA    E     152      E     152         37.563
LGA    E     153      E     153         41.065
LGA    G     154      G     154         36.115
LGA    D     155      D     155         33.864
LGA    Y     156      Y     156         32.124
LGA    P     157      P     157         35.124
LGA    L     158      L     158         29.837
LGA    P     159      P     159         31.846
LGA    A     160      A     160         27.559
LGA    S     161      S     161         21.682
LGA    E     162      E     162         24.751
LGA    F     163      F     163         24.771
LGA    I     164      I     164         17.965
LGA    L     165      L     165         14.003
LGA    P     166      P     166         15.467
LGA    E     167      E     167          9.860
LGA    C     168      C     168          5.076
LGA    D     169      D     169          6.619
LGA    Y     170      Y     170          6.437
LGA    V     171      V     171          7.521
LGA    Y     172      Y     172          6.214
LGA    I     173      I     173          9.562
LGA    T     174      T     174          9.018
LGA    C     175      C     175          3.935
LGA    A     176      A     176         10.509
LGA    S     177      S     177          6.896
LGA    V     178      V     178          5.947
LGA    V     179      V     179         12.937
LGA    D     180      D     180         14.113
LGA    K     181      K     181         10.073
LGA    T     182      T     182         10.299
LGA    L     183      L     183         10.138
LGA    P     184      P     184          8.854
LGA    R     185      R     185          8.773
LGA    L     186      L     186          9.095
LGA    L     187      L     187          8.979
LGA    E     188      E     188          8.485
LGA    L     189      L     189          8.414
LGA    S     190      S     190          8.714
LGA    R     191      R     191          8.962
LGA    N     192      N     192          3.820
LGA    A     193      A     193          3.718
LGA    R     194      R     194          3.556
LGA    R     195      R     195          2.517
LGA    I     196      I     196          2.871
LGA    T     197      T     197          3.843
LGA    L     198      L     198          3.952
LGA    V     199      V     199          1.674
LGA    G     200      G     200          1.180
LGA    P     201      P     201          2.840
LGA    G     202      G     202          2.423
LGA    T     203      T     203          4.220
LGA    P     204      P     204          3.127
LGA    L     205      L     205          4.812
LGA    A     206      A     206          2.142
LGA    P     207      P     207          3.060
LGA    V     208      V     208          2.875
LGA    L     209      L     209          3.055
LGA    F     210      F     210          2.866
LGA    E     211      E     211          2.530
LGA    H     212      H     212          3.211
LGA    G     213      G     213          4.405
LGA    L     214      L     214          5.860
LGA    Q     215      Q     215          7.732
LGA    E     216      E     216          7.561
LGA    L     217      L     217          7.202
LGA    S     218      S     218          7.995
LGA    G     219      G     219         10.641
LGA    F     220      F     220         10.886
LGA    M     221      M     221          8.549
LGA    V     222      V     222          8.619
LGA    K     223      K     223          8.050
LGA    D     224      D     224         10.272
LGA    N     225      N     225          6.972
LGA    A     226      A     226          8.637
LGA    R     227      R     227          9.624
LGA    A     228      A     228          8.880
LGA    F     229      F     229          9.344
LGA    R     230      R     230         11.807
LGA    I     231      I     231         12.319
LGA    V     232      V     232         10.991
LGA    A     233      A     233         12.953
LGA    G     234      G     234         15.306
LGA    A     235      A     235         21.086
LGA    E     236      E     236         19.055
LGA    K     237      K     237         15.835
LGA    V     238      V     238         17.142
LGA    K     239      K     239         16.826
LGA    I     240      I     240         18.157
LGA    Y     241      Y     241         19.661
LGA    S     242      S     242         23.337
LGA    A     243      A     243         26.351
LGA    G     244      G     244         25.847
LGA    Q     245      Q     245         25.554
LGA    K     246      K     246         21.978
LGA    V     247      V     247         20.800
LGA    T     248      T     248         23.226
LGA    I     249      I     249         24.912
LGA    K     250      K     250         29.296
LGA    K     251      K     251         32.844

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  155  148    4.0     22    2.99    18.243    14.683     0.713

LGA_LOCAL      RMSD =  2.987  Number of atoms =   22  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 16.768  Number of atoms =  148 
Std_ALL_ATOMS  RMSD = 15.722  (standard rmsd on all 148 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.592788 * X  +  -0.786321 * Y  +   0.174072 * Z  +  10.628566
  Y_new =  -0.759125 * X  +  -0.473370 * Y  +   0.446823 * Z  +  38.626705
  Z_new =  -0.268946 * X  +  -0.397014 * Y  +  -0.877524 * Z  +  75.572517 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.716724    0.424868  [ DEG:  -155.6568     24.3432 ]
  Theta =   0.272298    2.869294  [ DEG:    15.6015    164.3985 ]
  Phi   =  -0.907821    2.233772  [ DEG:   -52.0143    127.9857 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0321TS168_1-D2                               
REMARK     2: T0321_D2.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0321TS168_1-D2.T0321_D2.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  155  148   4.0   22   2.99  14.683    15.72
REMARK  ---------------------------------------------------------- 
MOLECULE T0321TS168_1-D2
PFRMAT TS
TARGET T0321
MODEL 1
PARENT N/A
ATOM     97  CA  VAL    97      10.294  43.520 102.214  1.00 25.00           C
ATOM     98  CA  ILE    98       9.725  42.989  98.482  1.00 25.00           C
ATOM     99  CA  PHE    99      12.471  44.745  96.578  1.00 25.00           C
ATOM    100  CA  SER   100      15.561  45.605  98.670  1.00 25.00           C
ATOM    101  CA  ASP   101      16.214  41.881  99.281  1.00 25.00           C
ATOM    102  CA  ALA   102      15.901  41.186  95.528  1.00 25.00           C
ATOM    103  CA  LYS   103      18.361  44.022  94.773  1.00 25.00           C
ATOM    104  CA  ARG   104      20.824  42.604  97.339  1.00 25.00           C
ATOM    105  CA  VAL   105      20.513  39.131  95.755  1.00 25.00           C
ATOM    106  CA  GLU   106      21.163  40.627  92.290  1.00 25.00           C
ATOM    107  CA  ASP   107      24.251  42.451  93.629  1.00 25.00           C
ATOM    108  CA  ARG   108      25.533  39.193  95.182  1.00 25.00           C
ATOM    109  CA  MET   109      25.965  37.408  91.897  1.00 25.00           C
ATOM    110  CA  ASN   110      26.700  40.152  89.389  1.00 25.00           C
ATOM    111  CA  ASP   111      30.120  39.873  87.826  1.00 25.00           C
ATOM    112  CA  PRO   112      30.135  36.299  89.204  1.00 25.00           C
ATOM    113  CA  PHE   113      29.015  34.955  85.798  1.00 25.00           C
ATOM    114  CA  ILE   114      31.802  36.936  84.073  1.00 25.00           C
ATOM    115  CA  MET   115      34.799  36.881  86.479  1.00 25.00           C
ATOM    116  CA  SER   116      37.153  37.509  83.513  1.00 25.00           C
ATOM    117  CA  GLN   117      39.254  40.107  81.694  1.00 25.00           C
ATOM    118  CA  ASN   118      37.586  43.017  79.841  1.00 25.00           C
ATOM    119  CA  GLU   119      34.072  41.840  78.952  1.00 25.00           C
ATOM    120  CA  VAL   120      32.921  38.598  77.398  1.00 25.00           C
ATOM    121  CA  LYS   121      29.899  40.332  75.752  1.00 25.00           C
ATOM    122  CA  GLY   122      26.924  41.680  77.691  1.00 25.00           C
ATOM    123  CA  LYS   123      24.008  43.854  76.561  1.00 25.00           C
ATOM    124  CA  LYS   124      20.409  45.224  76.398  1.00 25.00           C
ATOM    125  CA  VAL   125      16.727  46.182  76.188  1.00 25.00           C
ATOM    126  CA  GLY   126      14.632  46.155  79.342  1.00 25.00           C
ATOM    127  CA  VAL   127      13.916  49.781  78.503  1.00 25.00           C
ATOM    128  CA  VAL   128      12.676  52.691  80.594  1.00 25.00           C
ATOM    129  CA  GLY   129      10.342  51.726  83.408  1.00 25.00           C
ATOM    130  CA  HIS   130      11.727  48.194  83.018  1.00 25.00           C
ATOM    131  CA  PHE   131      13.932  49.236  85.903  1.00 25.00           C
ATOM    132  CA  PRO   132      17.450  49.618  84.381  1.00 25.00           C
ATOM    133  CA  HIS   133      17.595  51.973  81.414  1.00 25.00           C
ATOM    134  CA  LEU   134      19.473  49.329  79.354  1.00 25.00           C
ATOM    135  CA  GLU   135      22.491  51.624  79.990  1.00 25.00           C
ATOM    136  CA  SER   136      24.571  48.482  79.839  1.00 25.00           C
ATOM    137  CA  LEU   137      25.146  48.707  76.057  1.00 25.00           C
ATOM    138  CA  LEU   138      26.541  47.427  72.795  1.00 25.00           C
ATOM    139  CA  GLU   139      28.964  45.626  70.511  1.00 25.00           C
ATOM    140  CA  PRO   140      26.058  43.162  70.228  1.00 25.00           C
ATOM    141  CA  ILE   141      24.631  41.258  67.220  1.00 25.00           C
ATOM    142  CA  CYS   142      21.310  39.894  68.551  1.00 25.00           C
ATOM    143  CA  ASP   143      18.536  42.389  69.309  1.00 25.00           C
ATOM    144  CA  LEU   144      17.042  42.434  72.824  1.00 25.00           C
ATOM    145  CA  SER   145      13.582  43.774  71.759  1.00 25.00           C
ATOM    146  CA  ILE   146       9.804  44.284  71.521  1.00 25.00           C
ATOM    147  CA  LEU   147       6.831  45.755  73.421  1.00 25.00           C
ATOM    148  CA  GLU   148       4.740  45.557  76.593  1.00 25.00           C
ATOM    149  CA  TRP   149       1.827  43.426  77.790  1.00 25.00           C
ATOM    150  CA  SER   150      -0.730  45.811  79.209  1.00 25.00           C
ATOM    151  CA  PRO   151      -3.701  43.507  79.289  1.00 25.00           C
ATOM    152  CA  GLU   152      -6.824  42.713  81.400  1.00 25.00           C
ATOM    153  CA  GLU   153      -4.883  41.132  84.207  1.00 25.00           C
ATOM    154  CA  GLY   154      -1.831  39.880  82.321  1.00 25.00           C
ATOM    155  CA  ASP   155      -0.166  36.445  82.423  1.00 25.00           C
ATOM    156  CA  TYR   156       0.913  34.150  79.679  1.00 25.00           C
ATOM    157  CA  PRO   157      -0.641  30.711  79.854  1.00 25.00           C
ATOM    158  CA  LEU   158       1.609  29.537  77.050  1.00 25.00           C
ATOM    159  CA  PRO   159       4.451  30.148  79.545  1.00 25.00           C
ATOM    160  CA  ALA   160       7.024  29.115  76.904  1.00 25.00           C
ATOM    161  CA  SER   161       5.419  31.498  74.373  1.00 25.00           C
ATOM    162  CA  GLU   162       5.533  34.339  76.938  1.00 25.00           C
ATOM    163  CA  PHE   163       9.229  33.605  77.624  1.00 25.00           C
ATOM    164  CA  ILE   164       9.963  33.654  73.866  1.00 25.00           C
ATOM    165  CA  LEU   165      13.734  34.345  73.913  1.00 25.00           C
ATOM    166  CA  PRO   166      17.422  35.015  74.485  1.00 25.00           C
ATOM    167  CA  GLU   167      17.947  33.275  71.144  1.00 25.00           C
ATOM    168  CA  CYS   168      17.562  36.158  68.778  1.00 25.00           C
ATOM    169  CA  ASP   169      15.290  38.163  70.998  1.00 25.00           C
ATOM    170  CA  TYR   170      13.180  39.276  73.958  1.00 25.00           C
ATOM    171  CA  VAL   171       9.488  38.586  73.370  1.00 25.00           C
ATOM    172  CA  TYR   172       6.780  40.569  71.558  1.00 25.00           C
ATOM    173  CA  ILE   173       3.650  42.387  72.528  1.00 25.00           C
ATOM    174  CA  THR   174       1.318  44.630  70.547  1.00 25.00           C
ATOM    175  CA  CYS   175       1.428  44.783  66.710  1.00 25.00           C
ATOM    176  CA  ALA   176       0.644  41.048  67.022  1.00 25.00           C
ATOM    177  CA  SER   177       1.237  40.583  63.267  1.00 25.00           C
ATOM    178  CA  VAL   178       4.583  42.426  63.544  1.00 25.00           C
ATOM    179  CA  VAL   179       5.596  40.195  66.486  1.00 25.00           C
ATOM    180  CA  ASP   180       4.667  37.074  64.472  1.00 25.00           C
ATOM    181  CA  LYS   181       6.745  38.334  61.513  1.00 25.00           C
ATOM    182  CA  THR   182       9.721  38.964  63.839  1.00 25.00           C
ATOM    183  CA  LEU   183       9.378  35.430  65.275  1.00 25.00           C
ATOM    184  CA  PRO   184       9.289  33.973  61.734  1.00 25.00           C
ATOM    185  CA  ARG   185      12.432  35.959  60.812  1.00 25.00           C
ATOM    186  CA  LEU   186      14.198  34.672  63.957  1.00 25.00           C
ATOM    187  CA  LEU   187      13.210  31.079  63.071  1.00 25.00           C
ATOM    188  CA  GLU   188      14.556  31.559  59.518  1.00 25.00           C
ATOM    189  CA  LEU   189      17.845  32.931  60.923  1.00 25.00           C
ATOM    190  CA  SER   190      18.126  29.919  63.272  1.00 25.00           C
ATOM    191  CA  ARG   191      16.063  26.675  63.416  1.00 25.00           C
ATOM    192  CA  ASN   192      13.155  25.652  65.642  1.00 25.00           C
ATOM    193  CA  ALA   193      14.205  28.427  68.016  1.00 25.00           C
ATOM    194  CA  ARG   194      14.006  32.192  68.196  1.00 25.00           C
ATOM    195  CA  ARG   195      10.233  32.356  68.562  1.00 25.00           C
ATOM    196  CA  ILE   196      10.771  35.927  69.753  1.00 25.00           C
ATOM    197  CA  THR   197      11.044  39.538  68.628  1.00 25.00           C
ATOM    198  CA  LEU   198       9.219  42.673  67.518  1.00 25.00           C
ATOM    199  CA  VAL   199       6.213  45.048  67.866  1.00 25.00           C
ATOM    200  CA  GLY   200       6.054  48.791  68.524  1.00 25.00           C
ATOM    201  CA  PRO   201       3.031  49.341  70.785  1.00 25.00           C
ATOM    202  CA  GLY   202      -0.240  48.958  68.921  1.00 25.00           C
ATOM    203  CA  THR   203      -3.623  47.168  69.099  1.00 25.00           C
ATOM    204  CA  PRO   204      -4.878  43.891  67.632  1.00 25.00           C
ATOM    205  CA  LEU   205      -7.259  43.274  70.522  1.00 25.00           C
ATOM    206  CA  ALA   206      -5.760  41.218  73.385  1.00 25.00           C
ATOM    207  CA  PRO   207      -7.332  38.033  71.952  1.00 25.00           C
ATOM    208  CA  VAL   208      -5.896  38.849  68.497  1.00 25.00           C
ATOM    209  CA  LEU   209      -2.435  39.405  70.038  1.00 25.00           C
ATOM    210  CA  PHE   210      -2.685  36.049  71.869  1.00 25.00           C
ATOM    211  CA  GLU   211      -3.671  34.312  68.601  1.00 25.00           C
ATOM    212  CA  HIS   212      -0.690  35.924  66.815  1.00 25.00           C
ATOM    213  CA  GLY   213      -1.011  35.336  63.135  1.00 25.00           C
ATOM    214  CA  LEU   214       2.033  33.136  62.629  1.00 25.00           C
ATOM    215  CA  GLN   215       1.654  30.709  65.486  1.00 25.00           C
ATOM    216  CA  GLU   216       3.931  32.991  67.621  1.00 25.00           C
ATOM    217  CA  LEU   217       5.529  35.529  69.908  1.00 25.00           C
ATOM    218  CA  SER   218       2.780  38.075  69.795  1.00 25.00           C
ATOM    219  CA  GLY   219       2.340  37.400  73.558  1.00 25.00           C
ATOM    220  CA  PHE   220       0.003  40.334  74.267  1.00 25.00           C
ATOM    221  CA  MET   221      -1.046  44.035  74.290  1.00 25.00           C
ATOM    222  CA  VAL   222      -0.576  47.764  74.172  1.00 25.00           C
ATOM    223  CA  LYS   223      -1.274  51.384  74.898  1.00 25.00           C
ATOM    224  CA  ASP   224      -4.148  52.535  72.619  1.00 25.00           C
ATOM    225  CA  ASN   225      -4.359  56.044  71.143  1.00 25.00           C
ATOM    226  CA  ALA   226      -1.667  58.743  71.502  1.00 25.00           C
ATOM    227  CA  ARG   227       0.733  56.181  73.033  1.00 25.00           C
ATOM    228  CA  ALA   228       0.040  53.769  70.140  1.00 25.00           C
ATOM    229  CA  PHE   229       0.713  56.566  67.612  1.00 25.00           C
ATOM    230  CA  ARG   230       4.006  57.404  69.381  1.00 25.00           C
ATOM    231  CA  ILE   231       5.022  53.713  69.292  1.00 25.00           C
ATOM    232  CA  VAL   232       4.209  53.554  65.553  1.00 25.00           C
ATOM    233  CA  ALA   233       6.308  56.698  64.938  1.00 25.00           C
ATOM    234  CA  GLY   234       9.225  55.162  66.888  1.00 25.00           C
ATOM    235  CA  ALA   235       8.946  51.949  64.824  1.00 25.00           C
ATOM    236  CA  GLU   236       8.959  53.997  61.588  1.00 25.00           C
ATOM    237  CA  LYS   237      12.066  55.897  62.774  1.00 25.00           C
ATOM    238  CA  VAL   238      13.806  52.586  63.596  1.00 25.00           C
ATOM    239  CA  LYS   239      12.928  51.234  60.123  1.00 25.00           C
ATOM    240  CA  ILE   240      14.325  54.412  58.505  1.00 25.00           C
ATOM    241  CA  TYR   241      17.552  54.057  60.538  1.00 25.00           C
ATOM    242  CA  SER   242      18.413  50.625  61.935  1.00 25.00           C
ATOM    243  CA  ALA   243      16.873  47.327  60.883  1.00 25.00           C
ATOM    244  CA  GLY   244      13.820  45.913  59.096  1.00 25.00           C
ATOM    245  CA  GLN   245      11.185  46.726  56.538  1.00 25.00           C
ATOM    246  CA  LYS   246       7.482  46.152  56.546  1.00 25.00           C
ATOM    247  CA  VAL   247       3.988  47.240  57.559  1.00 25.00           C
ATOM    248  CA  THR   248       2.124  49.125  54.771  1.00 25.00           C
ATOM    249  CA  ILE   249      -1.576  49.752  54.255  1.00 25.00           C
ATOM    250  CA  LYS   250      -3.944  52.266  52.638  1.00 25.00           C
ATOM    251  CA  LYS   251      -5.846  55.293  51.501  1.00 25.00           C
TER
END
