
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   36 (  282),  selected   36 , name T0335TS640_1-D1
# Molecule2: number of CA atoms   36 (  584),  selected   36 , name T0335_D1.pdb
# PARAMETERS: T0335TS640_1-D1.T0335_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    26        15 - 40          4.53    13.65
  LCS_AVERAGE:     67.59

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    16        24 - 39          1.89    22.51
  LCS_AVERAGE:     38.81

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    13        24 - 36          0.86    22.55
  LCS_AVERAGE:     24.77

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   36
LCS_GDT     A       5     A       5      4   11   20     4    4    4    7    9   10   11   13   14   15   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     K       6     K       6      7   11   20     4    6    9    9   11   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     I       7     I       7      7   11   20     4    6    8   10   11   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     A       8     A       8      7   11   20     4    6    8   10   11   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     R       9     R       9      7   13   20     4    6    8   10   11   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     I      10     I      10      7   13   20     4    7    8   10   12   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     N      11     N      11      7   13   20     4    7    9   10   12   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     E      12     E      12      7   13   20     4    7    8   10   12   14   16   16   17   17   18   19   20   20   20   20   20   24   25   26 
LCS_GDT     L      13     L      13      7   13   20     4    7    8   10   12   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     A      14     A      14      7   13   20     4    7    8   10   12   14   16   16   17   17   18   19   20   20   20   20   20   21   21   22 
LCS_GDT     A      15     A      15      7   13   26     4    7    9   10   12   14   16   16   17   17   18   19   20   20   24   26   26   26   26   26 
LCS_GDT     K      16     K      16      7   13   26     5    6    9   10   12   14   16   16   17   17   20   22   24   25   25   26   26   26   26   26 
LCS_GDT     A      17     A      17      7   13   26     3    6    9   10   12   13   16   16   17   17   20   22   24   25   25   26   26   26   26   26 
LCS_GDT     K      18     K      18      7   13   26     5    6    9   10   12   14   16   16   17   21   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     A      19     A      19      7   13   26     5    7    9   10   12   14   16   17   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     G      20     G      20      7   13   26     5    6    9   10   12   14   16   16   19   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     V      21     V      21      7   13   26     5    6    9   10   12   13   16   17   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     I      22     I      22      4    8   26     3    4    5    6    9   13   15   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     T      23     T      23      4   15   26     3    4    6    8    9   13   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     E      24     E      24     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     E      25     E      25     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     E      26     E      26     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     K      27     K      27     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     A      28     A      28     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     E      29     E      29     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     Q      30     Q      30     13   16   26     8   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     Q      31     Q      31     13   16   26     8    9   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     K      32     K      32     13   16   26     5    9   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     L      33     L      33     13   16   26     5   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     R      34     R      34     13   16   26     5   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     Q      35     Q      35     13   16   26     4    7   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     E      36     E      36     13   16   26     4   10   13   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     Y      37     Y      37      9   16   26     4    7    9   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     L      38     L      38      9   16   26     4    7    9   15   15   15   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     K      39     K      39      5   16   26     3    6    7    8    9   13   16   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_GDT     G      40     G      40      5   11   26     3    3    5    8    9   13   14   18   21   22   23   23   24   25   25   26   26   26   26   26 
LCS_AVERAGE  LCS_A:  43.72  (  24.77   38.81   67.59 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      8     10     13     15     15     15     16     18     21     22     23     23     24     25     25     26     26     26     26     26 
GDT PERCENT_CA  22.22  27.78  36.11  41.67  41.67  41.67  44.44  50.00  58.33  61.11  63.89  63.89  66.67  69.44  69.44  72.22  72.22  72.22  72.22  72.22
GDT RMS_LOCAL    0.28   0.62   0.86   1.29   1.29   1.29   2.27   2.47   3.21   3.37   3.51   3.51   3.88   4.12   4.12   4.53   4.53   4.53   4.53   4.53
GDT RMS_ALL_CA  22.32  22.21  22.55  22.91  22.91  22.91  25.56  20.80  15.21  14.71  14.69  14.69  14.15  13.92  13.92  13.65  13.65  13.65  13.65  13.65

#      Molecule1      Molecule2       DISTANCE
LGA    A       5      A       5         42.952
LGA    K       6      K       6         42.197
LGA    I       7      I       7         36.442
LGA    A       8      A       8         34.937
LGA    R       9      R       9         35.002
LGA    I      10      I      10         31.309
LGA    N      11      N      11         25.917
LGA    E      12      E      12         26.388
LGA    L      13      L      13         25.824
LGA    A      14      A      14         22.042
LGA    A      15      A      15         17.455
LGA    K      16      K      16         18.319
LGA    A      17      A      17         14.455
LGA    K      18      K      18          8.849
LGA    A      19      A      19         10.985
LGA    G      20      G      20         13.997
LGA    V      21      V      21          9.889
LGA    I      22      I      22          5.099
LGA    T      23      T      23          2.677
LGA    E      24      E      24          3.634
LGA    E      25      E      25          1.868
LGA    E      26      E      26          3.037
LGA    K      27      K      27          3.046
LGA    A      28      A      28          1.879
LGA    E      29      E      29          1.146
LGA    Q      30      Q      30          1.126
LGA    Q      31      Q      31          2.832
LGA    K      32      K      32          3.372
LGA    L      33      L      33          2.172
LGA    R      34      R      34          0.852
LGA    Q      35      Q      35          2.462
LGA    E      36      E      36          3.379
LGA    Y      37      Y      37          2.622
LGA    L      38      L      38          1.373
LGA    K      39      K      39          3.131
LGA    G      40      G      40          3.897

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   36   36    4.0     18    2.47    47.917    46.801     0.699

LGA_LOCAL      RMSD =  2.474  Number of atoms =   18  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 18.554  Number of atoms =   36 
Std_ALL_ATOMS  RMSD = 10.864  (standard rmsd on all 36 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.133860 * X  +   0.672394 * Y  +   0.727989 * Z  + -27.881371
  Y_new =  -0.911949 * X  +  -0.203926 * Y  +   0.356038 * Z  +  22.373947
  Z_new =   0.387854 * X  +  -0.711548 * Y  +   0.585892 * Z  +  20.535734 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.881947    2.259646  [ DEG:   -50.5318    129.4682 ]
  Theta =  -0.398302   -2.743291  [ DEG:   -22.8210   -157.1790 ]
  Phi   =  -1.425052    1.716540  [ DEG:   -81.6495     98.3505 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0335TS640_1-D1                               
REMARK     2: T0335_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0335TS640_1-D1.T0335_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   36   36   4.0   18   2.47  46.801    10.86
REMARK  ---------------------------------------------------------- 
MOLECULE T0335TS640_1-D1
PFRMAT TS
TARGET T0335
MODEL 1 REFINED
PARENT N/A
ATOM     15  N   ALA     5     -25.494  16.709  17.757  1.00  1.00
ATOM     16  CA  ALA     5     -25.722  16.768  16.324  1.00  1.00
ATOM     17  C   ALA     5     -24.777  17.798  15.704  1.00  1.00
ATOM     18  O   ALA     5     -24.463  17.729  14.516  1.00  1.00
ATOM     19  CB  ALA     5     -27.176  17.161  16.052  1.00  1.00
ATOM     20  N   LYS     6     -24.324  18.753  16.510  1.00  1.00
ATOM     21  CA  LYS     6     -23.419  19.790  16.046  1.00  1.00
ATOM     22  C   LYS     6     -22.433  19.190  15.040  1.00  1.00
ATOM     23  O   LYS     6     -22.410  19.594  13.879  1.00  1.00
ATOM     24  CB  LYS     6     -22.657  20.379  17.235  1.00  1.00
ATOM     25  CG  LYS     6     -21.773  21.564  16.881  1.00  1.00
ATOM     26  CD  LYS     6     -20.676  21.763  17.914  1.00  1.00
ATOM     27  CE  LYS     6     -19.920  23.059  17.674  1.00  1.00
ATOM     28  NZ  LYS     6     -18.898  23.308  18.727  1.00  1.00
ATOM     29  N   ILE     7     -21.620  18.222  15.500  1.00  1.00
ATOM     30  CA  ILE     7     -20.640  17.573  14.646  1.00  1.00
ATOM     31  C   ILE     7     -21.204  17.459  13.227  1.00  1.00
ATOM     32  O   ILE     7     -20.465  17.582  12.252  1.00  1.00
ATOM     33  CB  ILE     7     -20.321  16.180  15.192  1.00  1.00
ATOM     34  CG1 ILE     7     -19.986  16.249  16.683  1.00  1.00
ATOM     35  CG2 ILE     7     -19.122  15.573  14.461  1.00  1.00
ATOM     36  CD1 ILE     7     -19.413  14.965  17.240  1.00  1.00
ATOM     37  N   ALA     8     -22.524  17.224  13.121  1.00  1.00
ATOM     38  CA  ALA     8     -23.182  17.095  11.832  1.00  1.00
ATOM     39  C   ALA     8     -22.446  17.952  10.800  1.00  1.00
ATOM     40  O   ALA     8     -22.171  17.490   9.693  1.00  1.00
ATOM     41  CB  ALA     8     -24.636  17.555  11.947  1.00  1.00
ATOM     42  N   ARG     9     -22.130  19.206  11.171  1.00  1.00
ATOM     43  CA  ARG     9     -21.432  20.122  10.286  1.00  1.00
ATOM     44  C   ARG     9     -19.923  19.915  10.431  1.00  1.00
ATOM     45  O   ARG     9     -19.247  19.588   9.457  1.00  1.00
ATOM     46  CB  ARG     9     -21.798  21.564  10.646  1.00  1.00
ATOM     47  CG  ARG     9     -21.076  22.612   9.816  1.00  1.00
ATOM     48  CD  ARG     9     -20.305  23.580  10.700  1.00  1.00
ATOM     49  NE  ARG     9     -20.126  24.882  10.059  1.00  1.00
ATOM     50  CZ  ARG     9     -19.171  25.748  10.383  1.00  1.00
ATOM     51  NH1 ARG     9     -19.085  26.908   9.745  1.00  1.00
ATOM     52  NH2 ARG     9     -18.306  25.453  11.343  1.00  1.00
ATOM     53  N   ILE    10     -19.403  20.105  11.656  1.00  1.00
ATOM     54  CA  ILE    10     -17.985  19.939  11.924  1.00  1.00
ATOM     55  C   ILE    10     -17.443  18.782  11.083  1.00  1.00
ATOM     56  O   ILE    10     -16.308  18.833  10.613  1.00  1.00
ATOM     57  CB  ILE    10     -17.770  19.647  13.412  1.00  1.00
ATOM     58  CG1 ILE    10     -18.779  20.416  14.265  1.00  1.00
ATOM     59  CG2 ILE    10     -16.363  20.062  13.845  1.00  1.00
ATOM     60  CD1 ILE    10     -18.179  21.044  15.503  1.00  1.00
ATOM     61  N   ASN    11     -18.267  17.735  10.897  1.00  1.00
ATOM     62  CA  ASN    11     -17.874  16.572  10.119  1.00  1.00
ATOM     63  C   ASN    11     -17.151  17.033   8.850  1.00  1.00
ATOM     64  O   ASN    11     -16.075  16.531   8.526  1.00  1.00
ATOM     65  CB  ASN    11     -19.114  15.759   9.745  1.00  1.00
ATOM     66  CG  ASN    11     -19.896  15.298  10.960  1.00  1.00
ATOM     67  OD1 ASN    11     -20.432  14.190  10.981  1.00  1.00
ATOM     68  ND2 ASN    11     -19.962  16.148  11.977  1.00  1.00
ATOM     69  N   GLU    12     -17.754  17.996   8.131  1.00  1.00
ATOM     70  CA  GLU    12     -17.165  18.513   6.907  1.00  1.00
ATOM     71  C   GLU    12     -15.668  18.749   7.126  1.00  1.00
ATOM     72  O   GLU    12     -14.844  17.950   6.685  1.00  1.00
ATOM     73  CB  GLU    12     -17.850  19.827   6.525  1.00  1.00
ATOM     74  CG  GLU    12     -17.353  20.430   5.221  1.00  1.00
ATOM     75  CD  GLU    12     -18.210  21.589   4.751  1.00  1.00
ATOM     76  OE1 GLU    12     -19.225  21.885   5.415  1.00  1.00
ATOM     77  OE2 GLU    12     -17.866  22.201   3.718  1.00  1.00
ATOM     78  N   LEU    13     -15.327  19.854   7.812  1.00  1.00
ATOM     79  CA  LEU    13     -13.940  20.188   8.087  1.00  1.00
ATOM     80  C   LEU    13     -13.367  19.185   9.090  1.00  1.00
ATOM     81  O   LEU    13     -12.347  18.551   8.824  1.00  1.00
ATOM     82  CB  LEU    13     -13.857  21.605   8.658  1.00  1.00
ATOM     83  CG  LEU    13     -12.481  22.059   9.150  1.00  1.00
ATOM     84  CD1 LEU    13     -11.720  22.768   8.041  1.00  1.00
ATOM     85  CD2 LEU    13     -12.619  23.018  10.322  1.00  1.00
ATOM     86  N   ALA    14     -14.035  19.046  10.249  1.00  1.00
ATOM     87  CA  ALA    14     -13.598  18.128  11.287  1.00  1.00
ATOM     88  C   ALA    14     -13.104  16.832  10.642  1.00  1.00
ATOM     89  O   ALA    14     -11.899  16.615  10.524  1.00  1.00
ATOM     90  CB  ALA    14     -14.764  17.829  12.233  1.00  1.00
ATOM     91  N   ALA    15     -14.048  15.968  10.224  1.00  1.00
ATOM     92  CA  ALA    15     -13.712  14.702   9.596  1.00  1.00
ATOM     93  C   ALA    15     -12.219  14.682   9.263  1.00  1.00
ATOM     94  O   ALA    15     -11.623  13.613   9.144  1.00  1.00
ATOM     95  CB  ALA    15     -14.537  14.532   8.318  1.00  1.00
ATOM     96  N   LYS    16     -11.620  15.877   9.112  1.00  1.00
ATOM     97  CA  LYS    16     -10.206  15.994   8.795  1.00  1.00
ATOM     98  C   LYS    16      -9.397  15.099   9.735  1.00  1.00
ATOM     99  O   LYS    16      -8.250  14.766   9.441  1.00  1.00
ATOM    100  CB  LYS    16      -9.765  17.451   8.952  1.00  1.00
ATOM    101  CG  LYS    16      -8.497  17.801   8.191  1.00  1.00
ATOM    102  CD  LYS    16      -8.173  19.282   8.309  1.00  1.00
ATOM    103  CE  LYS    16      -6.679  19.508   8.470  1.00  1.00
ATOM    104  NZ  LYS    16      -6.357  20.944   8.705  1.00  1.00
ATOM    105  N   ALA    17     -10.006  14.714  10.871  1.00  1.00
ATOM    106  CA  ALA    17      -9.348  13.864  11.849  1.00  1.00
ATOM    107  C   ALA    17      -8.638  12.717  11.126  1.00  1.00
ATOM    108  O   ALA    17      -7.412  12.711  11.029  1.00  1.00
ATOM    109  CB  ALA    17     -10.383  13.303  12.826  1.00  1.00
ATOM    110  N   LYS    18      -9.422  11.747  10.620  1.00  1.00
ATOM    111  CA  LYS    18      -8.865  10.608   9.914  1.00  1.00
ATOM    112  C   LYS    18      -7.878  11.101   8.854  1.00  1.00
ATOM    113  O   LYS    18      -6.667  10.947   9.010  1.00  1.00
ATOM    114  CB  LYS    18      -9.992   9.815   9.248  1.00  1.00
ATOM    115  CG  LYS    18      -9.551   8.485   8.658  1.00  1.00
ATOM    116  CD  LYS    18     -10.740   7.575   8.398  1.00  1.00
ATOM    117  CE  LYS    18     -10.401   6.502   7.377  1.00  1.00
ATOM    118  NZ  LYS    18     -11.572   6.158   6.523  1.00  1.00
ATOM    119  N   ALA    19      -8.405  11.698   7.771  1.00  1.00
ATOM    120  CA  ALA    19      -7.578  12.213   6.692  1.00  1.00
ATOM    121  C   ALA    19      -6.680  13.327   7.232  1.00  1.00
ATOM    122  O   ALA    19      -6.909  14.504   6.956  1.00  1.00
ATOM    123  CB  ALA    19      -8.471  12.755   5.575  1.00  1.00
ATOM    124  N   GLY    20      -5.662  12.941   7.998  1.00  1.00
ATOM    125  CA  GLY    20      -4.735  13.899   8.573  1.00  1.00
ATOM    126  C   GLY    20      -3.613  13.227   9.335  1.00  1.00
ATOM    127  O   GLY    20      -2.487  13.121   8.842  1.00  1.00
ATOM    128  N   VAL    21      -3.924  12.773  10.546  1.00  1.00
ATOM    129  CA  VAL    21      -2.959  12.101  11.408  1.00  1.00
ATOM    130  C   VAL    21      -2.820  10.615  11.099  1.00  1.00
ATOM    131  O   VAL    21      -1.828  10.200  10.496  1.00  1.00
ATOM    132  CB  VAL    21      -3.372  12.233  12.892  1.00  1.00
ATOM    133  CG1 VAL    21      -2.326  11.595  13.795  1.00  1.00
ATOM    134  CG2 VAL    21      -3.510  13.698  13.279  1.00  1.00
ATOM    135  N   ILE    22      -3.804   9.820  11.506  1.00  1.00
ATOM    136  CA  ILE    22      -3.769   8.389  11.262  1.00  1.00
ATOM    137  C   ILE    22      -2.443   8.029  10.587  1.00  1.00
ATOM    138  O   ILE    22      -2.141   8.533   9.507  1.00  1.00
ATOM    139  CB  ILE    22      -4.941   7.993  10.361  1.00  1.00
ATOM    140  CG1 ILE    22      -4.862   6.511   9.992  1.00  1.00
ATOM    141  CG2 ILE    22      -4.930   8.809   9.068  1.00  1.00
ATOM    142  CD1 ILE    22      -5.974   6.050   9.076  1.00  1.00
ATOM    143  N   THR    23      -1.657   7.153  11.235  1.00  1.00
ATOM    144  CA  THR    23      -0.373   6.731  10.700  1.00  1.00
ATOM    145  C   THR    23      -0.216   5.220  10.892  1.00  1.00
ATOM    146  O   THR    23      -0.043   4.753  12.015  1.00  1.00
ATOM    147  CB  THR    23       0.789   7.444  11.393  1.00  1.00
ATOM    148  OG1 THR    23       0.799   7.106  12.785  1.00  1.00
ATOM    149  CG2 THR    23       0.628   8.949  11.241  1.00  1.00
ATOM    150  N   GLU    24      -0.279   4.463   9.782  1.00  1.00
ATOM    151  CA  GLU    24      -0.144   3.017   9.831  1.00  1.00
ATOM    152  C   GLU    24       1.153   2.608   9.130  1.00  1.00
ATOM    153  O   GLU    24       1.355   2.928   7.959  1.00  1.00
ATOM    154  CB  GLU    24      -1.320   2.314   9.149  1.00  1.00
ATOM    155  CG  GLU    24      -1.839   1.099   9.902  1.00  1.00
ATOM    156  CD  GLU    24      -2.896   0.340   9.124  1.00  1.00
ATOM    157  OE1 GLU    24      -3.292   0.816   8.040  1.00  1.00
ATOM    158  OE2 GLU    24      -3.328  -0.731   9.600  1.00  1.00
ATOM    159  N   GLU    25       2.033   1.898   9.858  1.00  1.00
ATOM    160  CA  GLU    25       3.302   1.450   9.309  1.00  1.00
ATOM    161  C   GLU    25       3.047   0.648   8.031  1.00  1.00
ATOM    162  O   GLU    25       3.553   0.997   6.967  1.00  1.00
ATOM    163  CB  GLU    25       4.029   0.578  10.334  1.00  1.00
ATOM    164  CG  GLU    25       5.539   0.545  10.162  1.00  1.00
ATOM    165  CD  GLU    25       6.203  -0.488  11.050  1.00  1.00
ATOM    166  OE1 GLU    25       5.751  -1.652  11.049  1.00  1.00
ATOM    167  OE2 GLU    25       7.178  -0.135  11.748  1.00  1.00
ATOM    168  N   GLU    26       2.263  -0.419   8.145  1.00  1.00
ATOM    169  CA  GLU    26       1.940  -1.265   7.008  1.00  1.00
ATOM    170  C   GLU    26       1.279  -0.418   5.919  1.00  1.00
ATOM    171  O   GLU    26       1.566  -0.587   4.736  1.00  1.00
ATOM    172  CB  GLU    26       0.992  -2.382   7.449  1.00  1.00
ATOM    173  CG  GLU    26       0.567  -3.314   6.327  1.00  1.00
ATOM    174  CD  GLU    26       0.177  -4.690   6.830  1.00  1.00
ATOM    175  OE1 GLU    26       0.069  -4.864   8.062  1.00  1.00
ATOM    176  OE2 GLU    26      -0.020  -5.596   5.991  1.00  1.00
ATOM    177  N   LYS    27       0.387   0.501   6.330  1.00  1.00
ATOM    178  CA  LYS    27      -0.308   1.367   5.394  1.00  1.00
ATOM    179  C   LYS    27       0.716   2.205   4.625  1.00  1.00
ATOM    180  O   LYS    27       0.661   2.285   3.400  1.00  1.00
ATOM    181  CB  LYS    27      -1.268   2.284   6.154  1.00  1.00
ATOM    182  CG  LYS    27      -2.235   3.048   5.263  1.00  1.00
ATOM    183  CD  LYS    27      -2.973   4.124   6.042  1.00  1.00
ATOM    184  CE  LYS    27      -4.282   4.496   5.366  1.00  1.00
ATOM    185  NZ  LYS    27      -4.885   5.722   5.958  1.00  1.00
ATOM    186  N   ALA    28       1.655   2.831   5.359  1.00  1.00
ATOM    187  CA  ALA    28       2.685   3.655   4.751  1.00  1.00
ATOM    188  C   ALA    28       3.465   2.821   3.734  1.00  1.00
ATOM    189  O   ALA    28       3.516   3.169   2.555  1.00  1.00
ATOM    190  CB  ALA    28       3.630   4.176   5.835  1.00  1.00
ATOM    191  N   GLU    29       4.072   1.714   4.200  1.00  1.00
ATOM    192  CA  GLU    29       4.843   0.840   3.333  1.00  1.00
ATOM    193  C   GLU    29       4.124   0.702   1.988  1.00  1.00
ATOM    194  O   GLU    29       4.753   0.816   0.937  1.00  1.00
ATOM    195  CB  GLU    29       4.992  -0.533   3.990  1.00  1.00
ATOM    196  CG  GLU    29       5.974  -1.455   3.285  1.00  1.00
ATOM    197  CD  GLU    29       6.543  -2.514   4.208  1.00  1.00
ATOM    198  OE1 GLU    29       5.810  -2.975   5.109  1.00  1.00
ATOM    199  OE2 GLU    29       7.723  -2.886   4.030  1.00  1.00
ATOM    200  N   GLN    30       2.804   0.456   2.033  1.00  1.00
ATOM    201  CA  GLN    30       2.005   0.303   0.829  1.00  1.00
ATOM    202  C   GLN    30       1.844   1.665   0.151  1.00  1.00
ATOM    203  O   GLN    30       2.044   1.788  -1.056  1.00  1.00
ATOM    204  CB  GLN    30       0.632  -0.266   1.193  1.00  1.00
ATOM    205  CG  GLN    30       0.684  -1.615   1.891  1.00  1.00
ATOM    206  CD  GLN    30      -0.328  -1.728   3.014  1.00  1.00
ATOM    207  OE1 GLN    30      -0.844  -0.722   3.502  1.00  1.00
ATOM    208  NE2 GLN    30      -0.614  -2.956   3.429  1.00  1.00
ATOM    209  N   GLN    31       1.481   2.690   0.941  1.00  1.00
ATOM    210  CA  GLN    31       1.296   4.034   0.418  1.00  1.00
ATOM    211  C   GLN    31       2.545   4.451  -0.362  1.00  1.00
ATOM    212  O   GLN    31       2.450   4.849  -1.522  1.00  1.00
ATOM    213  CB  GLN    31       1.053   5.005   1.575  1.00  1.00
ATOM    214  CG  GLN    31      -0.385   5.482   1.693  1.00  1.00
ATOM    215  CD  GLN    31      -0.795   5.746   3.128  1.00  1.00
ATOM    216  OE1 GLN    31       0.049   5.810   4.024  1.00  1.00
ATOM    217  NE2 GLN    31      -2.094   5.902   3.353  1.00  1.00
ATOM    218  N   LYS    32       3.719   4.357   0.287  1.00  1.00
ATOM    219  CA  LYS    32       4.976   4.722  -0.343  1.00  1.00
ATOM    220  C   LYS    32       5.340   3.669  -1.392  1.00  1.00
ATOM    221  O   LYS    32       5.240   3.927  -2.590  1.00  1.00
ATOM    222  CB  LYS    32       6.079   4.806   0.716  1.00  1.00
ATOM    223  CG  LYS    32       7.475   4.997   0.145  1.00  1.00
ATOM    224  CD  LYS    32       8.526   4.989   1.243  1.00  1.00
ATOM    225  CE  LYS    32       9.924   5.152   0.669  1.00  1.00
ATOM    226  NZ  LYS    32      10.870   5.723   1.667  1.00  1.00
ATOM    227  N   LEU    33       5.762   2.479  -0.930  1.00  1.00
ATOM    228  CA  LEU    33       6.136   1.396  -1.822  1.00  1.00
ATOM    229  C   LEU    33       5.370   1.539  -3.140  1.00  1.00
ATOM    230  O   LEU    33       5.626   0.801  -4.090  1.00  1.00
ATOM    231  CB  LEU    33       5.805   0.054  -1.167  1.00  1.00
ATOM    232  CG  LEU    33       6.548  -1.167  -1.710  1.00  1.00
ATOM    233  CD1 LEU    33       7.964  -1.225  -1.158  1.00  1.00
ATOM    234  CD2 LEU    33       5.833  -2.451  -1.317  1.00  1.00
ATOM    235  N   ARG    34       4.426   2.496  -3.186  1.00  1.00
ATOM    236  CA  ARG    34       3.629   2.732  -4.378  1.00  1.00
ATOM    237  C   ARG    34       4.345   3.744  -5.272  1.00  1.00
ATOM    238  O   ARG    34       4.909   3.379  -6.304  1.00  1.00
ATOM    239  CB  ARG    34       2.252   3.269  -3.979  1.00  1.00
ATOM    240  CG  ARG    34       1.163   3.012  -5.007  1.00  1.00
ATOM    241  CD  ARG    34      -0.213   3.002  -4.364  1.00  1.00
ATOM    242  NE  ARG    34      -1.265   3.354  -5.315  1.00  1.00
ATOM    243  CZ  ARG    34      -2.539   3.543  -4.984  1.00  1.00
ATOM    244  NH1 ARG    34      -3.425   3.861  -5.917  1.00  1.00
ATOM    245  NH2 ARG    34      -2.922   3.414  -3.721  1.00  1.00
ATOM    246  N   GLN    35       4.321   5.027  -4.872  1.00  1.00
ATOM    247  CA  GLN    35       4.964   6.086  -5.632  1.00  1.00
ATOM    248  C   GLN    35       6.328   5.598  -6.123  1.00  1.00
ATOM    249  O   GLN    35       6.634   5.698  -7.310  1.00  1.00
ATOM    250  CB  GLN    35       5.135   7.321  -4.744  1.00  1.00
ATOM    251  CG  GLN    35       4.168   8.451  -5.058  1.00  1.00
ATOM    252  CD  GLN    35       4.658   9.794  -4.556  1.00  1.00
ATOM    253  OE1 GLN    35       5.790   9.917  -4.088  1.00  1.00
ATOM    254  NE2 GLN    35       3.805  10.807  -4.652  1.00  1.00
ATOM    255  N   GLU    36       7.148   5.068  -5.196  1.00  1.00
ATOM    256  CA  GLU    36       8.470   4.569  -5.534  1.00  1.00
ATOM    257  C   GLU    36       8.333   3.268  -6.326  1.00  1.00
ATOM    258  O   GLU    36       8.958   3.107  -7.375  1.00  1.00
ATOM    259  CB  GLU    36       9.265   4.318  -4.250  1.00  1.00
ATOM    260  CG  GLU    36      10.712   3.915  -4.485  1.00  1.00
ATOM    261  CD  GLU    36      11.554   4.007  -3.226  1.00  1.00
ATOM    262  OE1 GLU    36      11.028   4.476  -2.194  1.00  1.00
ATOM    263  OE2 GLU    36      12.737   3.613  -3.274  1.00  1.00
ATOM    264  N   TYR    37       7.506   2.336  -5.818  1.00  1.00
ATOM    265  CA  TYR    37       7.290   1.058  -6.475  1.00  1.00
ATOM    266  C   TYR    37       7.194   1.276  -7.987  1.00  1.00
ATOM    267  O   TYR    37       7.449   0.357  -8.762  1.00  1.00
ATOM    268  CB  TYR    37       5.998   0.424  -5.955  1.00  1.00
ATOM    269  CG  TYR    37       6.015  -1.087  -5.953  1.00  1.00
ATOM    270  CD1 TYR    37       6.363  -1.794  -4.808  1.00  1.00
ATOM    271  CD2 TYR    37       5.681  -1.804  -7.096  1.00  1.00
ATOM    272  CE1 TYR    37       6.380  -3.175  -4.797  1.00  1.00
ATOM    273  CE2 TYR    37       5.694  -3.186  -7.103  1.00  1.00
ATOM    274  CZ  TYR    37       6.047  -3.870  -5.940  1.00  1.00
ATOM    275  OH  TYR    37       6.065  -5.245  -5.931  1.00  1.00
ATOM    276  N   LEU    38       6.822   2.502  -8.396  1.00  1.00
ATOM    277  CA  LEU    38       6.693   2.838  -9.803  1.00  1.00
ATOM    278  C   LEU    38       7.402   1.773 -10.643  1.00  1.00
ATOM    279  O   LEU    38       6.769   0.823 -11.100  1.00  1.00
ATOM    280  CB  LEU    38       7.315   4.210 -10.065  1.00  1.00
ATOM    281  CG  LEU    38       6.981   4.861 -11.409  1.00  1.00
ATOM    282  CD1 LEU    38       5.592   5.478 -11.377  1.00  1.00
ATOM    283  CD2 LEU    38       7.981   5.959 -11.738  1.00  1.00
ATOM    284  N   LYS    39       8.722   1.943 -10.841  1.00  1.00
ATOM    285  CA  LYS    39       9.506   1.000 -11.622  1.00  1.00
ATOM    286  C   LYS    39       9.303  -0.410 -11.065  1.00  1.00
ATOM    287  O   LYS    39       9.006  -1.339 -11.815  1.00  1.00
ATOM    288  CB  LYS    39      10.988   1.378 -11.554  1.00  1.00
ATOM    289  CG  LYS    39      11.894   0.482 -12.381  1.00  1.00
ATOM    290  CD  LYS    39      13.332   0.973 -12.350  1.00  1.00
ATOM    291  CE  LYS    39      14.295  -0.107 -12.816  1.00  1.00
ATOM    292  NZ  LYS    39      15.685   0.150 -12.352  1.00  1.00
ATOM    293  N   GLY    40       9.466  -0.565  -9.739  1.00  1.00
ATOM    294  CA  GLY    40       9.300  -1.854  -9.092  1.00  1.00
ATOM    295  C   GLY    40       8.036  -2.532  -9.627  1.00  1.00
ATOM    296  O   GLY    40       7.873  -3.743  -9.494  1.00  1.00
TER
David Burke PhD
University of Cambridge
Department of Biochemistry
80 Tennis Court Road
Cambridge CB2 1GA, UK
Tel: 01223 766031
Group Fax: 01223 766082 
Dept Fax: 01223 766002 
Email:dave@cryst.bioc.cam.ac.uk
WWW: http://www-cryst.bioc.cam.ac.uk/~dave/
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END
