
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   36 (  282),  selected   36 , name T0335TS640_4-D1
# Molecule2: number of CA atoms   36 (  584),  selected   36 , name T0335_D1.pdb
# PARAMETERS: T0335TS640_4-D1.T0335_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    28         5 - 32          4.72     7.05
  LCS_AVERAGE:     77.16

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    16        25 - 40          1.99     8.79
  LCS_AVERAGE:     39.97

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     8         5 - 12          0.97    15.22
  LCS_AVERAGE:     18.90

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   36
LCS_GDT     A       5     A       5      8   14   28     4    7    7    9   11   14   14   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     K       6     K       6      8   14   28     5    7    9   13   13   14   15   18   21   23   24   24   25   28   29   35   36   36   36   36 
LCS_GDT     I       7     I       7      8   14   28     5    7    9   13   13   14   14   18   21   23   24   24   25   28   32   35   36   36   36   36 
LCS_GDT     A       8     A       8      8   14   28     5    7    9   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     R       9     R       9      8   14   28     5    7    9   13   13   14   15   18   21   23   24   24   25   28   30   35   36   36   36   36 
LCS_GDT     I      10     I      10      8   14   28     5    7    9   13   13   14   15   18   21   23   24   24   25   27   29   31   36   36   36   36 
LCS_GDT     N      11     N      11      8   14   28     4    7    9   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     E      12     E      12      8   14   28     4    7    9   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     L      13     L      13      7   14   28     4    7    9   13   13   14   15   18   21   23   24   24   25   28   32   35   36   36   36   36 
LCS_GDT     A      14     A      14      7   14   28     5    7    9   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     A      15     A      15      7   14   28     5    7    8   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     K      16     K      16      7   14   28     5    7    8   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     A      17     A      17      7   14   28     5    7    8   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     K      18     K      18      7   14   28     5    7    8   13   13   14   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     A      19     A      19      4    9   28     3    4    4    8   11   12   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     G      20     G      20      4    9   28     3    4    5    7    7   11   15   18   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     V      21     V      21      6    9   28     4    5    6    8    8   16   18   20   20   22   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     I      22     I      22      6   13   28     4    5    6    8   11   16   19   20   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     T      23     T      23      6   13   28     4    5    8   11   15   17   19   20   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     E      24     E      24      6   13   28     4    5    8   11   13   17   19   20   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     E      25     E      25      6   16   28     4    5    9   13   15   17   19   20   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     E      26     E      26      6   16   28     4    5    8   12   15   17   19   20   20   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     K      27     K      27      6   16   28     4    5    8    9   13   17   19   20   20   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     A      28     A      28      7   16   28     3    6    9   12   15   17   19   20   21   23   24   24   26   29   32   35   36   36   36   36 
LCS_GDT     E      29     E      29      7   16   28     3    6   10   13   15   17   19   20   20   20   21   24   26   29   32   35   36   36   36   36 
LCS_GDT     Q      30     Q      30      7   16   28     5    6   10   13   15   17   19   20   20   20   21   22   26   29   32   35   36   36   36   36 
LCS_GDT     Q      31     Q      31      7   16   28     5    6   10   13   15   17   19   20   20   20   21   22   26   29   32   35   36   36   36   36 
LCS_GDT     K      32     K      32      7   16   28     5    6   10   13   15   17   19   20   20   20   21   22   26   29   32   35   36   36   36   36 
LCS_GDT     L      33     L      33      7   16   27     6    6   10   13   15   17   19   20   20   20   21   22   25   29   32   35   36   36   36   36 
LCS_GDT     R      34     R      34      7   16   27     6    6   10   13   15   17   19   20   20   20   21   22   24   29   32   35   36   36   36   36 
LCS_GDT     Q      35     Q      35      7   16   27     6    6    8   13   15   17   19   20   20   20   21   22   24   29   32   35   36   36   36   36 
LCS_GDT     E      36     E      36      7   16   27     6    6   10   13   15   17   19   20   20   20   21   22   26   29   32   35   36   36   36   36 
LCS_GDT     Y      37     Y      37      7   16   27     6    6   10   13   15   17   19   20   20   20   21   22   26   29   32   35   36   36   36   36 
LCS_GDT     L      38     L      38      7   16   27     6    6   10   13   15   17   19   20   20   20   21   22   25   29   32   35   36   36   36   36 
LCS_GDT     K      39     K      39      7   16   27     3    4   10   13   15   17   19   20   20   20   21   22   26   29   32   35   36   36   36   36 
LCS_GDT     G      40     G      40      5   16   27     3    4   10   13   15   17   19   20   20   20   21   22   25   29   32   35   36   36   36   36 
LCS_AVERAGE  LCS_A:  45.34  (  18.90   39.97   77.16 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      6      7     10     13     15     17     19     20     21     23     24     24     26     29     32     35     36     36     36     36 
GDT PERCENT_CA  16.67  19.44  27.78  36.11  41.67  47.22  52.78  55.56  58.33  63.89  66.67  66.67  72.22  80.56  88.89  97.22 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.34   0.56   1.15   1.38   1.70   1.96   2.22   2.33   3.23   3.47   3.59   3.59   5.06   5.16   5.54   5.81   5.91   5.91   5.91   5.91
GDT RMS_ALL_CA  12.77   8.93   8.54   9.01   8.81   9.16   9.56   9.39   8.33   8.26   8.25   8.25   5.99   6.25   5.95   5.92   5.91   5.91   5.91   5.91

#      Molecule1      Molecule2       DISTANCE
LGA    A       5      A       5         15.155
LGA    K       6      K       6         16.879
LGA    I       7      I       7         14.908
LGA    A       8      A       8         14.426
LGA    R       9      R       9         16.437
LGA    I      10      I      10         15.651
LGA    N      11      N      11         12.739
LGA    E      12      E      12         15.111
LGA    L      13      L      13         14.456
LGA    A      14      A      14         12.393
LGA    A      15      A      15         13.730
LGA    K      16      K      16         13.910
LGA    A      17      A      17         10.614
LGA    K      18      K      18         10.903
LGA    A      19      A      19         12.535
LGA    G      20      G      20          8.926
LGA    V      21      V      21          3.705
LGA    I      22      I      22          3.353
LGA    T      23      T      23          1.359
LGA    E      24      E      24          3.184
LGA    E      25      E      25          1.355
LGA    E      26      E      26          1.576
LGA    K      27      K      27          3.001
LGA    A      28      A      28          1.267
LGA    E      29      E      29          1.506
LGA    Q      30      Q      30          2.272
LGA    Q      31      Q      31          2.012
LGA    K      32      K      32          1.057
LGA    L      33      L      33          1.649
LGA    R      34      R      34          3.393
LGA    Q      35      Q      35          3.416
LGA    E      36      E      36          2.285
LGA    Y      37      Y      37          2.264
LGA    L      38      L      38          1.478
LGA    K      39      K      39          1.434
LGA    G      40      G      40          1.961

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   36   36    4.0     20    2.33    52.083    48.918     0.822

LGA_LOCAL      RMSD =  2.333  Number of atoms =   20  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  9.387  Number of atoms =   36 
Std_ALL_ATOMS  RMSD =  5.914  (standard rmsd on all 36 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.029035 * X  +   0.889201 * Y  +  -0.456594 * Z  + -10.587849
  Y_new =   0.884791 * X  +   0.189670 * Y  +   0.425640 * Z  +  -8.959022
  Z_new =   0.465082 * X  +  -0.416348 * Y  +  -0.781251 * Z  +  -1.656782 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.651953    0.489640  [ DEG:  -151.9457     28.0543 ]
  Theta =  -0.483728   -2.657865  [ DEG:   -27.7155   -152.2845 ]
  Phi   =   1.537993   -1.603600  [ DEG:    88.1205    -91.8795 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0335TS640_4-D1                               
REMARK     2: T0335_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0335TS640_4-D1.T0335_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   36   36   4.0   20   2.33  48.918     5.91
REMARK  ---------------------------------------------------------- 
MOLECULE T0335TS640_4-D1
PFRMAT TS
TARGET T0335
MODEL 4 REFINED
PARENT N/A
ATOM     15  N   ALA     5     -13.245  -6.656   0.543  1.00  1.00
ATOM     16  CA  ALA     5     -13.995  -7.522   1.446  1.00  1.00
ATOM     17  C   ALA     5     -13.961  -6.918   2.853  1.00  1.00
ATOM     18  O   ALA     5     -14.960  -6.379   3.331  1.00  1.00
ATOM     19  CB  ALA     5     -13.388  -8.923   1.471  1.00  1.00
ATOM     20  N   LYS     6     -12.809  -7.011   3.511  1.00  1.00
ATOM     21  CA  LYS     6     -12.655  -6.461   4.854  1.00  1.00
ATOM     22  C   LYS     6     -12.783  -4.942   4.797  1.00  1.00
ATOM     23  O   LYS     6     -13.303  -4.317   5.722  1.00  1.00
ATOM     24  CB  LYS     6     -11.284  -6.824   5.465  1.00  1.00
ATOM     25  CG  LYS     6     -11.130  -6.428   6.924  1.00  1.00
ATOM     26  CD  LYS     6     -10.392  -7.498   7.712  1.00  1.00
ATOM     27  CE  LYS     6     -10.025  -7.004   9.103  1.00  1.00
ATOM     28  NZ  LYS     6      -9.992  -8.114  10.095  1.00  1.00
ATOM     29  N   ILE     7     -12.304  -4.358   3.704  1.00  1.00
ATOM     30  CA  ILE     7     -12.364  -2.916   3.507  1.00  1.00
ATOM     31  C   ILE     7     -13.821  -2.459   3.417  1.00  1.00
ATOM     32  O   ILE     7     -14.223  -1.472   4.036  1.00  1.00
ATOM     33  CB  ILE     7     -11.626  -2.547   2.218  1.00  1.00
ATOM     34  CG1 ILE     7     -10.477  -1.581   2.510  1.00  1.00
ATOM     35  CG2 ILE     7     -12.576  -1.877   1.224  1.00  1.00
ATOM     36  CD1 ILE     7      -9.118  -2.111   2.112  1.00  1.00
ATOM     37  N   ALA     8     -14.606  -3.192   2.635  1.00  1.00
ATOM     38  CA  ALA     8     -16.008  -2.861   2.470  1.00  1.00
ATOM     39  C   ALA     8     -16.733  -2.847   3.796  1.00  1.00
ATOM     40  O   ALA     8     -17.681  -2.089   3.982  1.00  1.00
ATOM     41  CB  ALA     8     -16.590  -3.725   1.693  1.00  1.00
ATOM     42  N   ARG     9     -16.284  -3.690   4.721  1.00  1.00
ATOM     43  CA  ARG     9     -16.893  -3.778   6.044  1.00  1.00
ATOM     44  C   ARG     9     -16.261  -2.813   7.041  1.00  1.00
ATOM     45  O   ARG     9     -16.878  -2.438   8.040  1.00  1.00
ATOM     46  CB  ARG     9     -16.744  -5.194   6.590  1.00  1.00
ATOM     47  CG  ARG     9     -17.502  -6.247   5.798  1.00  1.00
ATOM     48  CD  ARG     9     -16.583  -7.369   5.347  1.00  1.00
ATOM     49  NE  ARG     9     -16.954  -7.887   4.033  1.00  1.00
ATOM     50  CZ  ARG     9     -16.173  -8.662   3.288  1.00  1.00
ATOM     51  NH1 ARG     9     -16.596  -9.085   2.104  1.00  1.00
ATOM     52  NH2 ARG     9     -14.973  -9.012   3.728  1.00  1.00
ATOM     53  N   ILE    10     -15.024  -2.405   6.773  1.00  1.00
ATOM     54  CA  ILE    10     -14.344  -1.463   7.651  1.00  1.00
ATOM     55  C   ILE    10     -14.637  -0.040   7.192  1.00  1.00
ATOM     56  O   ILE    10     -14.890   0.847   8.005  1.00  1.00
ATOM     57  CB  ILE    10     -12.829  -1.693   7.642  1.00  1.00
ATOM     58  CG1 ILE    10     -12.497  -3.128   8.052  1.00  1.00
ATOM     59  CG2 ILE    10     -12.132  -0.743   8.618  1.00  1.00
ATOM     60  CD1 ILE    10     -11.018  -3.381   8.247  1.00  1.00
ATOM     61  N   ASN    11     -14.601   0.166   5.879  1.00  1.00
ATOM     62  CA  ASN    11     -14.837   1.486   5.295  1.00  1.00
ATOM     63  C   ASN    11     -15.782   2.372   6.103  1.00  1.00
ATOM     64  O   ASN    11     -15.551   3.577   6.237  1.00  1.00
ATOM     65  CB  ASN    11     -15.443   1.331   3.898  1.00  1.00
ATOM     66  CG  ASN    11     -14.425   1.541   2.795  1.00  1.00
ATOM     67  OD1 ASN    11     -14.780   1.859   1.661  1.00  1.00
ATOM     68  ND2 ASN    11     -13.151   1.363   3.126  1.00  1.00
ATOM     69  N   GLU    12     -16.843   1.779   6.641  1.00  1.00
ATOM     70  CA  GLU    12     -17.814   2.528   7.426  1.00  1.00
ATOM     71  C   GLU    12     -17.106   3.161   8.623  1.00  1.00
ATOM     72  O   GLU    12     -17.436   4.276   9.030  1.00  1.00
ATOM     73  CB  GLU    12     -18.929   1.598   7.914  1.00  1.00
ATOM     74  CG  GLU    12     -20.150   2.323   8.456  1.00  1.00
ATOM     75  CD  GLU    12     -21.005   2.925   7.357  1.00  1.00
ATOM     76  OE1 GLU    12     -21.327   4.129   7.447  1.00  1.00
ATOM     77  OE2 GLU    12     -21.353   2.193   6.407  1.00  1.00
ATOM     78  N   LEU    13     -16.134   2.434   9.173  1.00  1.00
ATOM     79  CA  LEU    13     -15.352   2.893  10.321  1.00  1.00
ATOM     80  C   LEU    13     -14.737   4.262  10.017  1.00  1.00
ATOM     81  O   LEU    13     -14.524   5.071  10.924  1.00  1.00
ATOM     82  CB  LEU    13     -14.239   1.893  10.630  1.00  1.00
ATOM     83  CG  LEU    13     -14.685   0.510  11.111  1.00  1.00
ATOM     84  CD1 LEU    13     -13.544  -0.490  11.005  1.00  1.00
ATOM     85  CD2 LEU    13     -15.136   0.565  12.562  1.00  1.00
ATOM     86  N   ALA    14     -14.456   4.510   8.739  1.00  1.00
ATOM     87  CA  ALA    14     -13.906   5.792   8.315  1.00  1.00
ATOM     88  C   ALA    14     -14.826   6.903   8.816  1.00  1.00
ATOM     89  O   ALA    14     -14.420   8.062   8.921  1.00  1.00
ATOM     90  CB  ALA    14     -13.794   5.859   6.789  1.00  1.00
ATOM     91  N   ALA    15     -16.066   6.529   9.121  1.00  1.00
ATOM     92  CA  ALA    15     -17.075   7.465   9.602  1.00  1.00
ATOM     93  C   ALA    15     -17.281   7.334  11.102  1.00  1.00
ATOM     94  O   ALA    15     -17.864   8.212  11.746  1.00  1.00
ATOM     95  CB  ALA    15     -18.405   7.200   8.897  1.00  1.00
ATOM     96  N   LYS    16     -16.797   6.231  11.656  1.00  1.00
ATOM     97  CA  LYS    16     -16.932   5.987  13.076  1.00  1.00
ATOM     98  C   LYS    16     -15.535   6.211  13.672  1.00  1.00
ATOM     99  O   LYS    16     -15.380   6.723  14.787  1.00  1.00
ATOM    100  CB  LYS    16     -17.424   4.550  13.291  1.00  1.00
ATOM    101  CG  LYS    16     -18.551   4.134  12.360  1.00  1.00
ATOM    102  CD  LYS    16     -19.066   2.746  12.702  1.00  1.00
ATOM    103  CE  LYS    16     -20.548   2.613  12.390  1.00  1.00
ATOM    104  NZ  LYS    16     -21.108   1.327  12.887  1.00  1.00
ATOM    105  N   ALA    17     -14.524   5.817  12.906  1.00  1.00
ATOM    106  CA  ALA    17     -13.132   5.960  13.310  1.00  1.00
ATOM    107  C   ALA    17     -12.731   7.435  13.329  1.00  1.00
ATOM    108  O   ALA    17     -11.800   7.819  14.035  1.00  1.00
ATOM    109  CB  ALA    17     -12.233   5.196  12.327  1.00  1.00
ATOM    110  N   LYS    18     -13.434   8.255  12.551  1.00  1.00
ATOM    111  CA  LYS    18     -13.148   9.686  12.482  1.00  1.00
ATOM    112  C   LYS    18     -12.429  10.160  13.746  1.00  1.00
ATOM    113  O   LYS    18     -12.105  11.339  13.878  1.00  1.00
ATOM    114  CB  LYS    18     -14.454  10.473  12.325  1.00  1.00
ATOM    115  CG  LYS    18     -14.259  11.925  11.920  1.00  1.00
ATOM    116  CD  LYS    18     -14.879  12.871  12.936  1.00  1.00
ATOM    117  CE  LYS    18     -15.172  14.228  12.320  1.00  1.00
ATOM    118  NZ  LYS    18     -14.069  14.685  11.431  1.00  1.00
ATOM    119  N   ALA    19     -12.186   9.236  14.671  1.00  1.00
ATOM    120  CA  ALA    19     -11.505   9.553  15.926  1.00  1.00
ATOM    121  C   ALA    19     -10.042   9.116  15.896  1.00  1.00
ATOM    122  O   ALA    19      -9.245   9.522  16.744  1.00  1.00
ATOM    123  CB  ALA    19     -12.197   8.853  17.084  1.00  1.00
ATOM    124  N   GLY    20      -9.698   8.286  14.915  1.00  1.00
ATOM    125  CA  GLY    20      -8.335   7.806  14.783  1.00  1.00
ATOM    126  C   GLY    20      -8.262   6.303  14.625  1.00  1.00
ATOM    127  O   GLY    20      -7.175   5.719  14.638  1.00  1.00
ATOM    128  N   VAL    21      -9.427   5.678  14.478  1.00  1.00
ATOM    129  CA  VAL    21      -9.525   4.230  14.335  1.00  1.00
ATOM    130  C   VAL    21      -8.259   3.596  13.770  1.00  1.00
ATOM    131  O   VAL    21      -7.667   2.716  14.399  1.00  1.00
ATOM    132  CB  VAL    21     -10.694   3.859  13.391  1.00  1.00
ATOM    133  CG1 VAL    21     -11.944   3.535  14.193  1.00  1.00
ATOM    134  CG2 VAL    21     -11.010   5.016  12.455  1.00  1.00
ATOM    135  N   ILE    22      -7.840   4.037  12.586  1.00  1.00
ATOM    136  CA  ILE    22      -6.643   3.493  11.944  1.00  1.00
ATOM    137  C   ILE    22      -5.617   4.585  11.621  1.00  1.00
ATOM    138  O   ILE    22      -5.955   5.766  11.521  1.00  1.00
ATOM    139  CB  ILE    22      -7.014   2.782  10.635  1.00  1.00
ATOM    140  CG1 ILE    22      -7.542   3.784   9.607  1.00  1.00
ATOM    141  CG2 ILE    22      -8.098   1.731  10.879  1.00  1.00
ATOM    142  CD1 ILE    22      -7.137   3.469   8.184  1.00  1.00
ATOM    143  N   THR    23      -4.361   4.178  11.457  1.00  1.00
ATOM    144  CA  THR    23      -3.277   5.107  11.143  1.00  1.00
ATOM    145  C   THR    23      -2.455   4.573   9.980  1.00  1.00
ATOM    146  O   THR    23      -2.462   3.372   9.718  1.00  1.00
ATOM    147  CB  THR    23      -2.350   5.310  12.353  1.00  1.00
ATOM    148  OG1 THR    23      -1.745   4.061  12.710  1.00  1.00
ATOM    149  CG2 THR    23      -3.156   5.834  13.532  1.00  1.00
ATOM    150  N   GLU    24      -1.749   5.459   9.284  1.00  1.00
ATOM    151  CA  GLU    24      -0.921   5.045   8.155  1.00  1.00
ATOM    152  C   GLU    24       0.265   4.195   8.590  1.00  1.00
ATOM    153  O   GLU    24       0.383   3.030   8.201  1.00  1.00
ATOM    154  CB  GLU    24      -0.373   6.265   7.407  1.00  1.00
ATOM    155  CG  GLU    24      -1.162   6.634   6.162  1.00  1.00
ATOM    156  CD  GLU    24      -1.433   5.441   5.268  1.00  1.00
ATOM    157  OE1 GLU    24      -1.481   5.622   4.033  1.00  1.00
ATOM    158  OE2 GLU    24      -1.598   4.324   5.802  1.00  1.00
ATOM    159  N   GLU    25       1.144   4.779   9.401  1.00  1.00
ATOM    160  CA  GLU    25       2.313   4.063   9.894  1.00  1.00
ATOM    161  C   GLU    25       2.263   2.645   9.343  1.00  1.00
ATOM    162  O   GLU    25       3.169   2.209   8.636  1.00  1.00
ATOM    163  CB  GLU    25       2.341   4.021  11.441  1.00  1.00
ATOM    164  CG  GLU    25       2.073   5.363  12.103  1.00  1.00
ATOM    165  CD  GLU    25       3.303   5.932  12.781  1.00  1.00
ATOM    166  OE1 GLU    25       4.083   5.144  13.357  1.00  1.00
ATOM    167  OE2 GLU    25       3.487   7.167  12.739  1.00  1.00
ATOM    168  N   GLU    26       1.194   1.927   9.674  1.00  1.00
ATOM    169  CA  GLU    26       1.006   0.555   9.219  1.00  1.00
ATOM    170  C   GLU    26       1.068   0.422   7.696  1.00  1.00
ATOM    171  O   GLU    26       1.715  -0.486   7.167  1.00  1.00
ATOM    172  CB  GLU    26      -0.358   0.037   9.689  1.00  1.00
ATOM    173  CG  GLU    26      -0.387  -0.406  11.143  1.00  1.00
ATOM    174  CD  GLU    26      -1.580  -1.284  11.461  1.00  1.00
ATOM    175  OE1 GLU    26      -2.023  -1.285  12.628  1.00  1.00
ATOM    176  OE2 GLU    26      -2.074  -1.971  10.542  1.00  1.00
ATOM    177  N   LYS    27       0.393   1.331   6.999  1.00  1.00
ATOM    178  CA  LYS    27       0.362   1.314   5.545  1.00  1.00
ATOM    179  C   LYS    27       1.405   2.258   4.954  1.00  1.00
ATOM    180  O   LYS    27       1.646   2.241   3.748  1.00  1.00
ATOM    181  CB  LYS    27      -1.019   1.737   5.036  1.00  1.00
ATOM    182  CG  LYS    27      -1.172   1.668   3.525  1.00  1.00
ATOM    183  CD  LYS    27      -2.534   2.177   3.084  1.00  1.00
ATOM    184  CE  LYS    27      -2.754   1.949   1.597  1.00  1.00
ATOM    185  NZ  LYS    27      -4.018   1.209   1.330  1.00  1.00
ATOM    186  N   ALA    28       2.023   3.078   5.801  1.00  1.00
ATOM    187  CA  ALA    28       3.041   4.018   5.337  1.00  1.00
ATOM    188  C   ALA    28       3.887   3.428   4.203  1.00  1.00
ATOM    189  O   ALA    28       4.474   4.169   3.414  1.00  1.00
ATOM    190  CB  ALA    28       3.968   4.392   6.490  1.00  1.00
ATOM    191  N   GLU    29       3.948   2.101   4.126  1.00  1.00
ATOM    192  CA  GLU    29       4.722   1.427   3.087  1.00  1.00
ATOM    193  C   GLU    29       4.339   1.871   1.684  1.00  1.00
ATOM    194  O   GLU    29       5.084   1.651   0.731  1.00  1.00
ATOM    195  CB  GLU    29       4.526  -0.096   3.153  1.00  1.00
ATOM    196  CG  GLU    29       4.959  -0.720   4.470  1.00  1.00
ATOM    197  CD  GLU    29       4.159  -0.205   5.650  1.00  1.00
ATOM    198  OE1 GLU    29       3.956  -0.975   6.613  1.00  1.00
ATOM    199  OE2 GLU    29       3.735   0.969   5.613  1.00  1.00
ATOM    200  N   GLN    30       3.179   2.499   1.547  1.00  1.00
ATOM    201  CA  GLN    30       2.730   2.979   0.243  1.00  1.00
ATOM    202  C   GLN    30       3.792   3.913  -0.321  1.00  1.00
ATOM    203  O   GLN    30       4.264   3.741  -1.442  1.00  1.00
ATOM    204  CB  GLN    30       1.386   3.734   0.346  1.00  1.00
ATOM    205  CG  GLN    30       0.168   2.829   0.403  1.00  1.00
ATOM    206  CD  GLN    30      -1.125   3.572   0.130  1.00  1.00
ATOM    207  OE1 GLN    30      -1.396   4.610   0.736  1.00  1.00
ATOM    208  NE2 GLN    30      -1.929   3.043  -0.785  1.00  1.00
ATOM    209  N   GLN    31       4.185   4.959   0.503  1.00  1.00
ATOM    210  CA  GLN    31       5.375   5.746   0.222  1.00  1.00
ATOM    211  C   GLN    31       6.506   4.816  -0.219  1.00  1.00
ATOM    212  O   GLN    31       7.151   5.052  -1.240  1.00  1.00
ATOM    213  CB  GLN    31       5.788   6.514   1.479  1.00  1.00
ATOM    214  CG  GLN    31       4.787   7.567   1.921  1.00  1.00
ATOM    215  CD  GLN    31       4.653   7.649   3.429  1.00  1.00
ATOM    216  OE1 GLN    31       4.997   6.707   4.143  1.00  1.00
ATOM    217  NE2 GLN    31       4.151   8.777   3.918  1.00  1.00
ATOM    218  N   LYS    32       6.746   3.747   0.563  1.00  1.00
ATOM    219  CA  LYS    32       7.795   2.792   0.248  1.00  1.00
ATOM    220  C   LYS    32       7.426   2.036  -1.029  1.00  1.00
ATOM    221  O   LYS    32       8.296   1.717  -1.838  1.00  1.00
ATOM    222  CB  LYS    32       7.958   1.809   1.409  1.00  1.00
ATOM    223  CG  LYS    32       9.373   1.283   1.583  1.00  1.00
ATOM    224  CD  LYS    32       9.379  -0.063   2.291  1.00  1.00
ATOM    225  CE  LYS    32      10.600  -0.212   3.184  1.00  1.00
ATOM    226  NZ  LYS    32      11.162  -1.590   3.132  1.00  1.00
ATOM    227  N   LEU    33       6.124   1.750  -1.205  1.00  1.00
ATOM    228  CA  LEU    33       5.650   1.034  -2.378  1.00  1.00
ATOM    229  C   LEU    33       5.857   1.907  -3.619  1.00  1.00
ATOM    230  O   LEU    33       6.207   1.399  -4.683  1.00  1.00
ATOM    231  CB  LEU    33       4.164   0.706  -2.212  1.00  1.00
ATOM    232  CG  LEU    33       3.492  -0.005  -3.389  1.00  1.00
ATOM    233  CD1 LEU    33       4.425  -1.043  -3.994  1.00  1.00
ATOM    234  CD2 LEU    33       2.224  -0.712  -2.936  1.00  1.00
ATOM    235  N   ARG    34       5.638   3.225  -3.473  1.00  1.00
ATOM    236  CA  ARG    34       5.798   4.160  -4.573  1.00  1.00
ATOM    237  C   ARG    34       6.824   3.602  -5.563  1.00  1.00
ATOM    238  O   ARG    34       6.544   3.503  -6.758  1.00  1.00
ATOM    239  CB  ARG    34       6.274   5.510  -4.033  1.00  1.00
ATOM    240  CG  ARG    34       7.052   6.342  -5.039  1.00  1.00
ATOM    241  CD  ARG    34       7.573   7.625  -4.412  1.00  1.00
ATOM    242  NE  ARG    34       8.253   8.474  -5.386  1.00  1.00
ATOM    243  CZ  ARG    34       8.579   9.745  -5.172  1.00  1.00
ATOM    244  NH1 ARG    34       9.197  10.439  -6.116  1.00  1.00
ATOM    245  NH2 ARG    34       8.283  10.318  -4.013  1.00  1.00
ATOM    246  N   GLN    35       8.015   3.239  -5.056  1.00  1.00
ATOM    247  CA  GLN    35       9.076   2.696  -5.888  1.00  1.00
ATOM    248  C   GLN    35       8.522   1.537  -6.720  1.00  1.00
ATOM    249  O   GLN    35       8.833   1.424  -7.906  1.00  1.00
ATOM    250  CB  GLN    35      10.223   2.201  -5.005  1.00  1.00
ATOM    251  CG  GLN    35      11.290   3.247  -4.729  1.00  1.00
ATOM    252  CD  GLN    35      11.834   3.167  -3.316  1.00  1.00
ATOM    253  OE1 GLN    35      11.542   2.224  -2.582  1.00  1.00
ATOM    254  NE2 GLN    35      12.627   4.159  -2.932  1.00  1.00
ATOM    255  N   GLU    36       7.700   0.681  -6.089  1.00  1.00
ATOM    256  CA  GLU    36       7.109  -0.458  -6.771  1.00  1.00
ATOM    257  C   GLU    36       6.025   0.032  -7.732  1.00  1.00
ATOM    258  O   GLU    36       5.686  -0.656  -8.694  1.00  1.00
ATOM    259  CB  GLU    36       6.502  -1.416  -5.745  1.00  1.00
ATOM    260  CG  GLU    36       6.206  -2.803  -6.290  1.00  1.00
ATOM    261  CD  GLU    36       5.984  -3.825  -5.193  1.00  1.00
ATOM    262  OE1 GLU    36       5.513  -3.435  -4.104  1.00  1.00
ATOM    263  OE2 GLU    36       6.282  -5.017  -5.421  1.00  1.00
ATOM    264  N   TYR    37       5.480   1.233  -7.463  1.00  1.00
ATOM    265  CA  TYR    37       4.441   1.808  -8.300  1.00  1.00
ATOM    266  C   TYR    37       5.036   2.203  -9.653  1.00  1.00
ATOM    267  O   TYR    37       4.882   1.475 -10.632  1.00  1.00
ATOM    268  CB  TYR    37       3.850   3.039  -7.611  1.00  1.00
ATOM    269  CG  TYR    37       2.687   3.658  -8.351  1.00  1.00
ATOM    270  CD1 TYR    37       1.404   3.141  -8.220  1.00  1.00
ATOM    271  CD2 TYR    37       2.875   4.756  -9.181  1.00  1.00
ATOM    272  CE1 TYR    37       0.334   3.700  -8.894  1.00  1.00
ATOM    273  CE2 TYR    37       1.817   5.328  -9.861  1.00  1.00
ATOM    274  CZ  TYR    37       0.540   4.790  -9.711  1.00  1.00
ATOM    275  OH  TYR    37      -0.524   5.349 -10.383  1.00  1.00
ATOM    276  N   LEU    38       5.717   3.364  -9.695  1.00  1.00
ATOM    277  CA  LEU    38       6.330   3.851 -10.918  1.00  1.00
ATOM    278  C   LEU    38       7.624   3.078 -11.177  1.00  1.00
ATOM    279  O   LEU    38       7.800   2.511 -12.256  1.00  1.00
ATOM    280  CB  LEU    38       6.634   5.344 -10.785  1.00  1.00
ATOM    281  CG  LEU    38       7.160   6.043 -12.040  1.00  1.00
ATOM    282  CD1 LEU    38       6.439   5.535 -13.280  1.00  1.00
ATOM    283  CD2 LEU    38       6.946   7.546 -11.949  1.00  1.00
ATOM    284  N   LYS    39       8.526   3.060 -10.181  1.00  1.00
ATOM    285  CA  LYS    39       9.794   2.361 -10.302  1.00  1.00
ATOM    286  C   LYS    39       9.602   1.117 -11.172  1.00  1.00
ATOM    287  O   LYS    39      10.099   1.065 -12.296  1.00  1.00
ATOM    288  CB  LYS    39      10.295   1.956  -8.913  1.00  1.00
ATOM    289  CG  LYS    39      11.449   0.967  -8.933  1.00  1.00
ATOM    290  CD  LYS    39      11.391   0.026  -7.742  1.00  1.00
ATOM    291  CE  LYS    39      12.470  -1.040  -7.827  1.00  1.00
ATOM    292  NZ  LYS    39      12.518  -1.881  -6.598  1.00  1.00
ATOM    293  N   GLY    40       8.876   0.117 -10.642  1.00  1.00
ATOM    294  CA  GLY    40       8.622  -1.116 -11.368  1.00  1.00
ATOM    295  C   GLY    40       7.484  -0.892 -12.366  1.00  1.00
ATOM    296  O   GLY    40       7.348  -1.647 -13.327  1.00  1.00
TER
David Burke PhD
University of Cambridge
Department of Biochemistry
80 Tennis Court Road
Cambridge CB2 1GA, UK
Tel: 01223 766031
Group Fax: 01223 766082 
Dept Fax: 01223 766002 
Email:dave@cryst.bioc.cam.ac.uk
WWW: http://www-cryst.bioc.cam.ac.uk/~dave/
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END
