
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   36 (  356),  selected   36 , name T0335TS736_1u-D1
# Molecule2: number of CA atoms   36 (  584),  selected   36 , name T0335_D1.pdb
# PARAMETERS: T0335TS736_1u-D1.T0335_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    36         5 - 40          3.43     3.43
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    18         5 - 22          1.84     5.47
  LONGEST_CONTINUOUS_SEGMENT:    18        23 - 40          1.85    10.68
  LCS_AVERAGE:     50.00

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    14         5 - 18          0.60     5.68
  LCS_AVERAGE:     31.02

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   36
LCS_GDT     A       5     A       5     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     K       6     K       6     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     I       7     I       7     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     A       8     A       8     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     R       9     R       9     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     I      10     I      10     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     N      11     N      11     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     E      12     E      12     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     L      13     L      13     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     A      14     A      14     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     A      15     A      15     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     K      16     K      16     14   18   36     9   13   14   14   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     A      17     A      17     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     K      18     K      18     14   18   36     9   13   14   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     A      19     A      19      3   18   36     3    3    5    9   16   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     G      20     G      20      4   18   36     3    4    5   13   16   18   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     V      21     V      21      4   18   36     3    4    5    5   15   18   25   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     I      22     I      22      4   18   36     3    4    5    7   10   20   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     T      23     T      23     10   18   36     8    9   11   14   16   20   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     E      24     E      24     10   18   36     8    9   11   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     E      25     E      25     10   18   36     8    9   11   14   15   18   18   28   30   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     E      26     E      26     10   18   36     8    9   11   15   16   18   20   25   28   32   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     K      27     K      27     10   18   36     8    9   11   15   16   18   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     A      28     A      28     10   18   36     8    9   12   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     E      29     E      29     10   18   36     8    9   11   15   16   18   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     Q      30     Q      30     11   18   36     8   11   11   15   16   18   22   27   30   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     Q      31     Q      31     11   18   36     6   11   11   15   18   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     K      32     K      32     11   18   36     6   11   11   15   18   22   25   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     L      33     L      33     11   18   36     5   11   11   15   16   20   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     R      34     R      34     11   18   36     6   11   11   15   16   22   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     Q      35     Q      35     11   18   36     6   11   11   15   18   22   25   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     E      36     E      36     11   18   36     6   11   11   15   16   18   25   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     Y      37     Y      37     11   18   36     4   11   11   15   16   20   26   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     L      38     L      38     11   18   36     4   11   11   15   18   22   25   29   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     K      39     K      39     11   18   36     4   11   11   15   16   18   20   28   32   33   36   36   36   36   36   36   36   36   36   36 
LCS_GDT     G      40     G      40     11   18   36     6   11   11   15   16   18   18   24   29   33   36   36   36   36   36   36   36   36   36   36 
LCS_AVERAGE  LCS_A:  60.34  (  31.02   50.00  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      9     13     14     15     18     22     26     29     32     33     36     36     36     36     36     36     36     36     36     36 
GDT PERCENT_CA  25.00  36.11  38.89  41.67  50.00  61.11  72.22  80.56  88.89  91.67 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.26   0.52   0.60   1.40   1.67   2.09   2.69   2.69   3.00   3.11   3.43   3.43   3.43   3.43   3.43   3.43   3.43   3.43   3.43   3.43
GDT RMS_ALL_CA   5.18   5.74   5.68  10.74   3.93   3.84   3.70   3.61   3.48   3.46   3.43   3.43   3.43   3.43   3.43   3.43   3.43   3.43   3.43   3.43

#      Molecule1      Molecule2       DISTANCE
LGA    A       5      A       5          3.198
LGA    K       6      K       6          3.145
LGA    I       7      I       7          2.290
LGA    A       8      A       8          1.559
LGA    R       9      R       9          2.317
LGA    I      10      I      10          2.205
LGA    N      11      N      11          1.907
LGA    E      12      E      12          1.932
LGA    L      13      L      13          2.556
LGA    A      14      A      14          1.900
LGA    A      15      A      15          2.639
LGA    K      16      K      16          2.734
LGA    A      17      A      17          1.707
LGA    K      18      K      18          2.064
LGA    A      19      A      19          3.192
LGA    G      20      G      20          3.450
LGA    V      21      V      21          3.788
LGA    I      22      I      22          3.545
LGA    T      23      T      23          4.462
LGA    E      24      E      24          2.100
LGA    E      25      E      25          5.869
LGA    E      26      E      26          6.636
LGA    K      27      K      27          3.742
LGA    A      28      A      28          1.859
LGA    E      29      E      29          4.921
LGA    Q      30      Q      30          5.919
LGA    Q      31      Q      31          2.436
LGA    K      32      K      32          2.562
LGA    L      33      L      33          3.520
LGA    R      34      R      34          3.084
LGA    Q      35      Q      35          2.847
LGA    E      36      E      36          3.757
LGA    Y      37      Y      37          3.173
LGA    L      38      L      38          1.881
LGA    K      39      K      39          4.976
LGA    G      40      G      40          5.964

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   36   36    4.0     29    2.69    64.583    64.620     1.039

LGA_LOCAL      RMSD =  2.692  Number of atoms =   29  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.481  Number of atoms =   36 
Std_ALL_ATOMS  RMSD =  3.428  (standard rmsd on all 36 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.784742 * X  +   0.568477 * Y  +  -0.247010 * Z  + -166.600555
  Y_new =  -0.188052 * X  +   0.598097 * Y  +   0.779048 * Z  + -178.529160
  Z_new =   0.590607 * X  +  -0.564901 * Y  +   0.576255 * Z  + -99.858910 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.775449    2.366144  [ DEG:   -44.4299    135.5701 ]
  Theta =  -0.631811   -2.509781  [ DEG:   -36.2001   -143.7999 ]
  Phi   =  -0.235200    2.906393  [ DEG:   -13.4760    166.5240 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0335TS736_1u-D1                              
REMARK     2: T0335_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0335TS736_1u-D1.T0335_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   36   36   4.0   29   2.69  64.620     3.43
REMARK  ---------------------------------------------------------- 
MOLECULE T0335TS736_1u-D1
PFRMAT TS
TARGET T0335
MODEL  1  UNREFINED
PARENT N/A
ATOM     38  N   ALA     5      -1.430 -10.490  -9.659  1.00  0.00           N  
ATOM     39  CA  ALA     5      -0.472 -10.743  -8.574  1.00  0.00           C  
ATOM     40  C   ALA     5      -0.075  -9.413  -7.884  1.00  0.00           C  
ATOM     41  O   ALA     5      -0.759  -9.093  -6.896  1.00  0.00           O  
ATOM     42  CB  ALA     5       0.843 -11.344  -9.140  1.00  0.00           C  
ATOM     43  HN  ALA     5      -1.315  -9.661 -10.231  1.00  0.00           H  
ATOM     44  N   LYS     6       0.518  -8.546  -8.656  1.00  0.00           N  
ATOM     45  CA  LYS     6       0.912  -7.233  -8.092  1.00  0.00           C  
ATOM     46  C   LYS     6      -0.306  -6.366  -7.814  1.00  0.00           C  
ATOM     47  O   LYS     6      -0.617  -6.140  -6.631  1.00  0.00           O  
ATOM     48  CB  LYS     6       1.912  -6.520  -9.003  1.00  0.00           C  
ATOM     49  CG  LYS     6       2.732  -5.473  -8.268  1.00  0.00           C  
ATOM     50  CD  LYS     6       3.386  -6.059  -7.018  1.00  0.00           C  
ATOM     51  CE  LYS     6       3.669  -4.965  -6.013  1.00  0.00           C  
ATOM     52  NZ  LYS     6       5.042  -4.365  -6.139  1.00  0.00           N  
ATOM     53  HN  LYS     6       0.972  -8.844  -9.486  1.00  0.00           H  
ATOM     54  HZ1 LYS     6       5.697  -5.035  -5.845  1.00  0.00           H  
ATOM     55  HZ2 LYS     6       5.097  -4.142  -7.111  1.00  0.00           H  
ATOM     56  HZ3 LYS     6       5.062  -3.516  -5.598  1.00  0.00           H  
ATOM     57  N   ILE     7      -1.261  -6.392  -8.762  1.00  0.00           N  
ATOM     58  CA  ILE     7      -2.498  -5.645  -8.548  1.00  0.00           C  
ATOM     59  C   ILE     7      -3.311  -6.149  -7.383  1.00  0.00           C  
ATOM     60  O   ILE     7      -3.749  -5.345  -6.534  1.00  0.00           O  
ATOM     61  CB  ILE     7      -3.301  -5.595  -9.859  1.00  0.00           C  
ATOM     62  CG1 ILE     7      -2.506  -5.095 -11.046  1.00  0.00           C  
ATOM     63  CG2 ILE     7      -4.587  -4.749  -9.687  1.00  0.00           C  
ATOM     64  CD1 ILE     7      -3.161  -5.459 -12.379  1.00  0.00           C  
ATOM     65  HN  ILE     7      -1.036  -6.827  -9.648  1.00  0.00           H  
ATOM     66  N   ALA     8      -3.439  -7.452  -7.246  1.00  0.00           N  
ATOM     67  CA  ALA     8      -4.267  -7.991  -6.141  1.00  0.00           C  
ATOM     68  C   ALA     8      -3.626  -7.650  -4.815  1.00  0.00           C  
ATOM     69  O   ALA     8      -4.306  -7.199  -3.868  1.00  0.00           O  
ATOM     70  CB  ALA     8      -4.488  -9.480  -6.305  1.00  0.00           C  
ATOM     71  HN  ALA     8      -2.902  -8.065  -7.841  1.00  0.00           H  
ATOM     72  N   ARG     9      -2.283  -7.710  -4.746  1.00  0.00           N  
ATOM     73  CA  ARG     9      -1.633  -7.371  -3.503  1.00  0.00           C  
ATOM     74  C   ARG     9      -1.832  -5.906  -3.128  1.00  0.00           C  
ATOM     75  O   ARG     9      -2.062  -5.628  -1.969  1.00  0.00           O  
ATOM     76  CB  ARG     9      -0.122  -7.688  -3.625  1.00  0.00           C  
ATOM     77  CG  ARG     9       0.505  -8.021  -2.300  1.00  0.00           C  
ATOM     78  CD  ARG     9       2.005  -7.848  -2.318  1.00  0.00           C  
ATOM     79  NE  ARG     9       2.595  -8.185  -1.043  1.00  0.00           N  
ATOM     80  CZ  ARG     9       3.869  -7.906  -0.724  1.00  0.00           C  
ATOM     81  NH1 ARG     9       4.600  -7.147  -1.534  1.00  0.00           N  
ATOM     82  NH2 ARG     9       4.415  -8.379   0.401  1.00  0.00           N  
ATOM     83  HN  ARG     9      -1.793  -8.167  -5.461  1.00  0.00           H  
ATOM     84  HE  ARG     9       2.127  -8.850  -0.432  1.00  0.00           H  
ATOM     85 1HH1 ARG     9       5.608  -7.249  -1.495  1.00  0.00           H  
ATOM     86 2HH1 ARG     9       4.118  -6.620  -2.259  1.00  0.00           H  
ATOM     87 1HH2 ARG     9       3.937  -9.132   0.879  1.00  0.00           H  
ATOM     88 2HH2 ARG     9       5.414  -8.257   0.516  1.00  0.00           H  
ATOM     89  N   ILE    10      -1.776  -5.038  -4.154  1.00  0.00           N  
ATOM     90  CA  ILE    10      -2.001  -3.613  -3.892  1.00  0.00           C  
ATOM     91  C   ILE    10      -3.452  -3.361  -3.447  1.00  0.00           C  
ATOM     92  O   ILE    10      -3.668  -2.668  -2.482  1.00  0.00           O  
ATOM     93  CB  ILE    10      -1.693  -2.837  -5.196  1.00  0.00           C  
ATOM     94  CG1 ILE    10      -0.244  -3.023  -5.662  1.00  0.00           C  
ATOM     95  CG2 ILE    10      -2.048  -1.365  -5.051  1.00  0.00           C  
ATOM     96  CD1 ILE    10       0.706  -2.075  -4.940  1.00  0.00           C  
ATOM     97  HN  ILE    10      -1.359  -5.340  -5.000  1.00  0.00           H  
ATOM     98  N   ASN    11      -4.398  -4.052  -4.081  1.00  0.00           N  
ATOM     99  CA  ASN    11      -5.807  -3.894  -3.702  1.00  0.00           C  
ATOM    100  C   ASN    11      -6.071  -4.402  -2.264  1.00  0.00           C  
ATOM    101  O   ASN    11      -6.503  -3.611  -1.453  1.00  0.00           O  
ATOM    102  CB  ASN    11      -6.730  -4.622  -4.664  1.00  0.00           C  
ATOM    103  CG  ASN    11      -8.172  -4.199  -4.702  1.00  0.00           C  
ATOM    104  OD1 ASN    11      -8.869  -4.263  -3.659  1.00  0.00           O  
ATOM    105  ND2 ASN    11      -8.539  -3.400  -5.692  1.00  0.00           N  
ATOM    106  HN  ASN    11      -4.122  -4.693  -4.806  1.00  0.00           H  
ATOM    107 1HND ASN    11      -7.877  -2.965  -6.272  1.00  0.00           H  
ATOM    108 2HND ASN    11      -9.477  -3.021  -5.653  1.00  0.00           H  
ATOM    109  N   GLU    12      -5.424  -5.531  -1.952  1.00  0.00           N  
ATOM    110  CA  GLU    12      -5.448  -6.004  -0.561  1.00  0.00           C  
ATOM    111  C   GLU    12      -4.829  -5.021   0.386  1.00  0.00           C  
ATOM    112  O   GLU    12      -5.250  -4.996   1.559  1.00  0.00           O  
ATOM    113  CB  GLU    12      -4.858  -7.411  -0.450  1.00  0.00           C  
ATOM    114  CG  GLU    12      -5.754  -8.534  -0.871  1.00  0.00           C  
ATOM    115  CD  GLU    12      -5.850  -9.595   0.224  1.00  0.00           C  
ATOM    116  OE1 GLU    12      -6.812 -10.404   0.181  1.00  0.00           O  
ATOM    117  OE2 GLU    12      -5.073  -9.493   1.204  1.00  0.00           O  
ATOM    118  HN  GLU    12      -5.189  -6.189  -2.650  1.00  0.00           H  
ATOM    119  N   LEU    13      -3.772  -4.339  -0.047  1.00  0.00           N  
ATOM    120  CA  LEU    13      -3.179  -3.310   0.833  1.00  0.00           C  
ATOM    121  C   LEU    13      -4.140  -2.130   1.058  1.00  0.00           C  
ATOM    122  O   LEU    13      -4.474  -1.850   2.223  1.00  0.00           O  
ATOM    123  CB  LEU    13      -1.864  -2.793   0.228  1.00  0.00           C  
ATOM    124  CG  LEU    13      -0.618  -3.556   0.621  1.00  0.00           C  
ATOM    125  CD1 LEU    13       0.345  -3.811  -0.514  1.00  0.00           C  
ATOM    126  CD2 LEU    13       0.205  -2.849   1.680  1.00  0.00           C  
ATOM    127  HN  LEU    13      -3.334  -4.586  -0.910  1.00  0.00           H  
ATOM    128  N   ALA    14      -4.772  -1.698  -0.011  1.00  0.00           N  
ATOM    129  CA  ALA    14      -5.733  -0.572   0.124  1.00  0.00           C  
ATOM    130  C   ALA    14      -6.946  -0.985   0.957  1.00  0.00           C  
ATOM    131  O   ALA    14      -7.280  -0.321   1.964  1.00  0.00           O  
ATOM    132  CB  ALA    14      -6.198  -0.156  -1.276  1.00  0.00           C  
ATOM    133  HN  ALA    14      -4.440  -1.879  -0.930  1.00  0.00           H  
ATOM    134  N   ALA    15      -7.457  -2.182   0.768  1.00  0.00           N  
ATOM    135  CA  ALA    15      -8.617  -2.633   1.575  1.00  0.00           C  
ATOM    136  C   ALA    15      -8.232  -2.824   3.040  1.00  0.00           C  
ATOM    137  O   ALA    15      -9.111  -2.704   3.896  1.00  0.00           O  
ATOM    138  CB  ALA    15      -9.242  -3.883   0.971  1.00  0.00           C  
ATOM    139  HN  ALA    15      -7.307  -2.639  -0.130  1.00  0.00           H  
ATOM    140  N   LYS    16      -6.987  -3.264   3.292  1.00  0.00           N  
ATOM    141  CA  LYS    16      -6.546  -3.278   4.695  1.00  0.00           C  
ATOM    142  C   LYS    16      -6.641  -1.858   5.282  1.00  0.00           C  
ATOM    143  O   LYS    16      -7.249  -1.701   6.369  1.00  0.00           O  
ATOM    144  CB  LYS    16      -5.102  -3.792   4.788  1.00  0.00           C  
ATOM    145  CG  LYS    16      -4.432  -3.538   6.117  1.00  0.00           C  
ATOM    146  CD  LYS    16      -2.978  -3.146   6.025  1.00  0.00           C  
ATOM    147  CE  LYS    16      -2.177  -3.592   7.240  1.00  0.00           C  
ATOM    148  NZ  LYS    16      -0.894  -2.857   7.325  1.00  0.00           N  
ATOM    149  HN  LYS    16      -6.464  -3.749   2.591  1.00  0.00           H  
ATOM    150  HZ1 LYS    16      -1.068  -1.877   7.291  1.00  0.00           H  
ATOM    151  HZ2 LYS    16      -0.392  -3.139   8.135  1.00  0.00           H  
ATOM    152  HZ3 LYS    16      -0.321  -3.102   6.527  1.00  0.00           H  
ATOM    153  N   ALA    17      -6.036  -0.875   4.633  1.00  0.00           N  
ATOM    154  CA  ALA    17      -6.059   0.480   5.233  1.00  0.00           C  
ATOM    155  C   ALA    17      -7.147   1.305   4.498  1.00  0.00           C  
ATOM    156  O   ALA    17      -6.983   2.519   4.355  1.00  0.00           O  
ATOM    157  CB  ALA    17      -4.725   1.184   5.073  1.00  0.00           C  
ATOM    158  HN  ALA    17      -5.744  -0.963   3.702  1.00  0.00           H  
ATOM    159  N   LYS    18      -8.358   0.746   4.542  1.00  0.00           N  
ATOM    160  CA  LYS    18      -9.569   1.585   4.396  1.00  0.00           C  
ATOM    161  C   LYS    18      -9.652   2.589   5.565  1.00  0.00           C  
ATOM    162  O   LYS    18      -9.603   3.797   5.372  1.00  0.00           O  
ATOM    163  CB  LYS    18     -10.793   0.671   4.488  1.00  0.00           C  
ATOM    164  CG  LYS    18     -11.267   0.215   3.119  1.00  0.00           C  
ATOM    165  CD  LYS    18     -12.785   0.012   3.038  1.00  0.00           C  
ATOM    166  CE  LYS    18     -13.290  -0.296   1.641  1.00  0.00           C  
ATOM    167  NZ  LYS    18     -14.702   0.109   1.474  1.00  0.00           N  
ATOM    168  HN  LYS    18      -8.495  -0.234   4.576  1.00  0.00           H  
ATOM    169  HZ1 LYS    18     -15.229  -0.560   1.991  1.00  0.00           H  
ATOM    170  HZ2 LYS    18     -14.840   1.028   1.863  1.00  0.00           H  
ATOM    171  HZ3 LYS    18     -14.936   0.122   0.512  1.00  0.00           H  
ATOM    172  N   ALA    19      -9.586   2.066   6.787  1.00  0.00           N  
ATOM    173  CA  ALA    19      -9.911   2.914   7.958  1.00  0.00           C  
ATOM    174  C   ALA    19      -9.420   2.199   9.220  1.00  0.00           C  
ATOM    175  O   ALA    19      -9.782   1.061   9.503  1.00  0.00           O  
ATOM    176  CB  ALA    19     -11.431   3.155   8.029  1.00  0.00           C  
ATOM    177  HN  ALA    19      -9.385   1.094   6.931  1.00  0.00           H  
ATOM    178  N   GLY    20      -8.848   3.002  10.108  1.00  0.00           N  
ATOM    179  CA  GLY    20      -8.468   2.498  11.438  1.00  0.00           C  
ATOM    180  C   GLY    20      -7.753   3.578  12.201  1.00  0.00           C  
ATOM    181  O   GLY    20      -8.293   4.688  12.341  1.00  0.00           O  
ATOM    182  HN  GLY    20      -8.448   3.889   9.818  1.00  0.00           H  
ATOM    183  N   VAL    21      -6.461   3.343  12.473  1.00  0.00           N  
ATOM    184  CA  VAL    21      -5.652   4.458  13.027  1.00  0.00           C  
ATOM    185  C   VAL    21      -5.278   5.400  11.859  1.00  0.00           C  
ATOM    186  O   VAL    21      -4.493   5.005  10.990  1.00  0.00           O  
ATOM    187  CB  VAL    21      -4.341   3.945  13.621  1.00  0.00           C  
ATOM    188  CG1 VAL    21      -3.779   4.841  14.705  1.00  0.00           C  
ATOM    189  CG2 VAL    21      -4.438   2.499  14.061  1.00  0.00           C  
ATOM    190  HN  VAL    21      -5.989   2.604  12.006  1.00  0.00           H  
ATOM    191  N   ILE    22      -6.052   6.488  11.732  1.00  0.00           N  
ATOM    192  CA  ILE    22      -6.058   7.220  10.456  1.00  0.00           C  
ATOM    193  C   ILE    22      -4.666   7.710  10.051  1.00  0.00           C  
ATOM    194  O   ILE    22      -4.220   7.600   8.888  1.00  0.00           O  
ATOM    195  CB  ILE    22      -7.033   8.413  10.595  1.00  0.00           C  
ATOM    196  CG1 ILE    22      -8.463   7.982  10.875  1.00  0.00           C  
ATOM    197  CG2 ILE    22      -6.946   9.292   9.343  1.00  0.00           C  
ATOM    198  CD1 ILE    22      -9.488   8.647   9.987  1.00  0.00           C  
ATOM    199  HN  ILE    22      -6.560   6.804  12.535  1.00  0.00           H  
ATOM    200  N   THR    23      -4.033   8.414  10.951  1.00  0.00           N  
ATOM    201  CA  THR    23      -2.739   9.037  10.607  1.00  0.00           C  
ATOM    202  C   THR    23      -1.617   8.048  10.447  1.00  0.00           C  
ATOM    203  O   THR    23      -0.866   8.075   9.441  1.00  0.00           O  
ATOM    204  CB  THR    23      -2.367  10.062  11.686  1.00  0.00           C  
ATOM    205  OG1 THR    23      -3.378  11.032  11.889  1.00  0.00           O  
ATOM    206  CG2 THR    23      -1.013  10.726  11.392  1.00  0.00           C  
ATOM    207  HN  THR    23      -4.408   8.535  11.890  1.00  0.00           H  
ATOM    208  HO  THR    23      -3.513  11.589  11.052  1.00  0.00           H  
ATOM    209  N   GLU    24      -1.639   6.948  11.238  1.00  0.00           N  
ATOM    210  CA  GLU    24      -0.577   5.941  10.983  1.00  0.00           C  
ATOM    211  C   GLU    24      -0.825   5.255   9.658  1.00  0.00           C  
ATOM    212  O   GLU    24       0.117   5.079   8.858  1.00  0.00           O  
ATOM    213  CB  GLU    24      -0.536   4.919  12.103  1.00  0.00           C  
ATOM    214  CG  GLU    24       0.801   4.367  12.508  1.00  0.00           C  
ATOM    215  CD  GLU    24       1.262   3.175  11.681  1.00  0.00           C  
ATOM    216  OE1 GLU    24       2.419   3.134  11.268  1.00  0.00           O  
ATOM    217  OE2 GLU    24       0.482   2.187  11.592  1.00  0.00           O  
ATOM    218  HN  GLU    24      -2.079   6.964  12.125  1.00  0.00           H  
ATOM    219  N   GLU    25      -2.060   4.764   9.415  1.00  0.00           N  
ATOM    220  CA  GLU    25      -2.375   4.097   8.168  1.00  0.00           C  
ATOM    221  C   GLU    25      -2.432   5.016   6.977  1.00  0.00           C  
ATOM    222  O   GLU    25      -2.476   4.519   5.846  1.00  0.00           O  
ATOM    223  CB  GLU    25      -3.740   3.366   8.276  1.00  0.00           C  
ATOM    224  CG  GLU    25      -3.769   2.206   9.247  1.00  0.00           C  
ATOM    225  CD  GLU    25      -5.097   1.515   9.393  1.00  0.00           C  
ATOM    226  OE1 GLU    25      -5.929   1.525   8.457  1.00  0.00           O  
ATOM    227  OE2 GLU    25      -5.465   1.147  10.548  1.00  0.00           O  
ATOM    228  HN  GLU    25      -2.684   4.827  10.204  1.00  0.00           H  
ATOM    229  N   GLU    26      -2.294   6.336   7.162  1.00  0.00           N  
ATOM    230  CA  GLU    26      -1.870   7.175   6.026  1.00  0.00           C  
ATOM    231  C   GLU    26      -0.348   7.130   5.929  1.00  0.00           C  
ATOM    232  O   GLU    26       0.146   6.724   4.866  1.00  0.00           O  
ATOM    233  CB  GLU    26      -2.353   8.618   6.222  1.00  0.00           C  
ATOM    234  CG  GLU    26      -1.630   9.574   5.274  1.00  0.00           C  
ATOM    235  CD  GLU    26      -2.448  10.823   4.942  1.00  0.00           C  
ATOM    236  OE1 GLU    26      -2.071  11.565   4.016  1.00  0.00           O  
ATOM    237  OE2 GLU    26      -3.319  11.202   5.760  1.00  0.00           O  
ATOM    238  HN  GLU    26      -2.550   6.761   8.040  1.00  0.00           H  
ATOM    239  N   LYS    27       0.372   7.303   7.002  1.00  0.00           N  
ATOM    240  CA  LYS    27       1.812   7.529   6.924  1.00  0.00           C  
ATOM    241  C   LYS    27       2.572   6.326   6.426  1.00  0.00           C  
ATOM    242  O   LYS    27       3.641   6.420   5.865  1.00  0.00           O  
ATOM    243  CB  LYS    27       2.350   7.904   8.317  1.00  0.00           C  
ATOM    244  CG  LYS    27       2.135   9.326   8.742  1.00  0.00           C  
ATOM    245  CD  LYS    27       3.126   9.718   9.849  1.00  0.00           C  
ATOM    246  CE  LYS    27       4.559   9.410   9.366  1.00  0.00           C  
ATOM    247  NZ  LYS    27       5.356   8.909  10.513  1.00  0.00           N  
ATOM    248  HN  LYS    27      -0.063   7.434   7.911  1.00  0.00           H  
ATOM    249  HZ1 LYS    27       4.981   8.010  10.762  1.00  0.00           H  
ATOM    250  HZ2 LYS    27       6.297   8.811  10.221  1.00  0.00           H  
ATOM    251  HZ3 LYS    27       5.264   9.568  11.285  1.00  0.00           H  
ATOM    252  N   ALA    28       2.060   5.125   6.776  1.00  0.00           N  
ATOM    253  CA  ALA    28       2.559   3.898   6.186  1.00  0.00           C  
ATOM    254  C   ALA    28       2.410   3.843   4.664  1.00  0.00           C  
ATOM    255  O   ALA    28       3.377   3.612   3.939  1.00  0.00           O  
ATOM    256  CB  ALA    28       1.859   2.644   6.766  1.00  0.00           C  
ATOM    257  HN  ALA    28       1.209   5.116   7.308  1.00  0.00           H  
ATOM    258  N   GLU    29       1.165   3.950   4.218  1.00  0.00           N  
ATOM    259  CA  GLU    29       0.888   3.852   2.789  1.00  0.00           C  
ATOM    260  C   GLU    29       1.613   4.863   1.959  1.00  0.00           C  
ATOM    261  O   GLU    29       2.116   4.517   0.872  1.00  0.00           O  
ATOM    262  CB  GLU    29      -0.620   4.000   2.569  1.00  0.00           C  
ATOM    263  CG  GLU    29      -1.344   2.647   2.570  1.00  0.00           C  
ATOM    264  CD  GLU    29      -2.805   2.718   2.233  1.00  0.00           C  
ATOM    265  OE1 GLU    29      -3.521   3.546   2.834  1.00  0.00           O  
ATOM    266  OE2 GLU    29      -3.195   2.040   1.250  1.00  0.00           O  
ATOM    267  HN  GLU    29       0.460   4.391   4.803  1.00  0.00           H  
ATOM    268  N   GLN    30       1.884   6.042   2.531  1.00  0.00           N  
ATOM    269  CA  GLN    30       2.493   7.120   1.732  1.00  0.00           C  
ATOM    270  C   GLN    30       3.904   6.740   1.276  1.00  0.00           C  
ATOM    271  O   GLN    30       4.330   7.247   0.234  1.00  0.00           O  
ATOM    272  CB  GLN    30       2.520   8.416   2.576  1.00  0.00           C  
ATOM    273  CG  GLN    30       2.564   9.684   1.777  1.00  0.00           C  
ATOM    274  CD  GLN    30       1.562  10.690   2.258  1.00  0.00           C  
ATOM    275  OE1 GLN    30       0.897  11.400   1.488  1.00  0.00           O  
ATOM    276  NE2 GLN    30       1.309  10.707   3.575  1.00  0.00           N  
ATOM    277  HN  GLN    30       1.605   6.248   3.476  1.00  0.00           H  
ATOM    278 1HNE GLN    30       1.550   9.921   4.113  1.00  0.00           H  
ATOM    279 2HNE GLN    30       0.636  11.349   3.957  1.00  0.00           H  
ATOM    280  N   GLN    31       4.640   5.998   2.098  1.00  0.00           N  
ATOM    281  CA  GLN    31       5.922   5.473   1.609  1.00  0.00           C  
ATOM    282  C   GLN    31       5.707   4.108   0.909  1.00  0.00           C  
ATOM    283  O   GLN    31       6.173   3.908  -0.208  1.00  0.00           O  
ATOM    284  CB  GLN    31       6.899   5.297   2.800  1.00  0.00           C  
ATOM    285  CG  GLN    31       8.335   5.141   2.356  1.00  0.00           C  
ATOM    286  CD  GLN    31       8.782   3.674   2.216  1.00  0.00           C  
ATOM    287  OE1 GLN    31       8.642   2.953   3.233  1.00  0.00           O  
ATOM    288  NE2 GLN    31       9.791   3.458   1.393  1.00  0.00           N  
ATOM    289  HN  GLN    31       4.193   5.473   2.848  1.00  0.00           H  
ATOM    290 1HNE GLN    31      10.141   2.533   1.268  1.00  0.00           H  
ATOM    291 2HNE GLN    31      10.382   4.236   1.145  1.00  0.00           H  
ATOM    292  N   LYS    32       5.070   3.179   1.626  1.00  0.00           N  
ATOM    293  CA  LYS    32       5.275   1.757   1.242  1.00  0.00           C  
ATOM    294  C   LYS    32       4.459   1.452   0.006  1.00  0.00           C  
ATOM    295  O   LYS    32       4.895   0.785  -0.907  1.00  0.00           O  
ATOM    296  CB  LYS    32       4.855   0.865   2.408  1.00  0.00           C  
ATOM    297  CG  LYS    32       5.406  -0.539   2.303  1.00  0.00           C  
ATOM    298  CD  LYS    32       4.376  -1.636   2.323  1.00  0.00           C  
ATOM    299  CE  LYS    32       3.544  -1.696   3.579  1.00  0.00           C  
ATOM    300  NZ  LYS    32       4.286  -2.098   4.814  1.00  0.00           N  
ATOM    301  HN  LYS    32       4.806   3.371   2.574  1.00  0.00           H  
ATOM    302  HZ1 LYS    32       3.631  -2.156   5.568  1.00  0.00           H  
ATOM    303  HZ2 LYS    32       4.636  -2.999   4.597  1.00  0.00           H  
ATOM    304  HZ3 LYS    32       5.000  -1.452   4.999  1.00  0.00           H  
ATOM    305  N   LEU    33       3.202   1.932  -0.031  1.00  0.00           N  
ATOM    306  CA  LEU    33       2.503   1.941  -1.341  1.00  0.00           C  
ATOM    307  C   LEU    33       2.819   3.246  -2.064  1.00  0.00           C  
ATOM    308  O   LEU    33       2.027   3.672  -2.926  1.00  0.00           O  
ATOM    309  CB  LEU    33       1.008   1.871  -1.091  1.00  0.00           C  
ATOM    310  CG  LEU    33       0.411   0.516  -0.795  1.00  0.00           C  
ATOM    311  CD1 LEU    33      -1.020   0.371  -1.283  1.00  0.00           C  
ATOM    312  CD2 LEU    33       1.180  -0.557  -1.565  1.00  0.00           C  
ATOM    313  HN  LEU    33       2.919   2.623   0.657  1.00  0.00           H  
ATOM    314  N   ARG    34       4.096   3.675  -2.038  1.00  0.00           N  
ATOM    315  CA  ARG    34       4.678   4.434  -3.159  1.00  0.00           C  
ATOM    316  C   ARG    34       5.911   3.687  -3.727  1.00  0.00           C  
ATOM    317  O   ARG    34       5.836   3.336  -4.909  1.00  0.00           O  
ATOM    318  CB  ARG    34       5.109   5.828  -2.746  1.00  0.00           C  
ATOM    319  CG  ARG    34       6.377   6.343  -3.404  1.00  0.00           C  
ATOM    320  CD  ARG    34       6.618   7.842  -3.213  1.00  0.00           C  
ATOM    321  NE  ARG    34       6.067   8.328  -1.944  1.00  0.00           N  
ATOM    322  CZ  ARG    34       5.769   9.608  -1.687  1.00  0.00           C  
ATOM    323  NH1 ARG    34       5.216   9.921  -0.519  1.00  0.00           N  
ATOM    324  NH2 ARG    34       5.680  10.477  -2.705  1.00  0.00           N  
ATOM    325  HN  ARG    34       4.616   3.558  -1.193  1.00  0.00           H  
ATOM    326  HE  ARG    34       5.972   7.671  -1.204  1.00  0.00           H  
ATOM    327 1HH1 ARG    34       5.280  10.847  -0.143  1.00  0.00           H  
ATOM    328 2HH1 ARG    34       4.655   9.208  -0.072  1.00  0.00           H  
ATOM    329 1HH2 ARG    34       5.987  10.190  -3.600  1.00  0.00           H  
ATOM    330 2HH2 ARG    34       5.207  11.354  -2.551  1.00  0.00           H  
ATOM    331  N   GLN    35       6.686   3.066  -2.854  1.00  0.00           N  
ATOM    332  CA  GLN    35       7.808   2.264  -3.315  1.00  0.00           C  
ATOM    333  C   GLN    35       7.334   0.961  -4.007  1.00  0.00           C  
ATOM    334  O   GLN    35       7.386   0.911  -5.246  1.00  0.00           O  
ATOM    335  CB  GLN    35       8.669   1.887  -2.083  1.00  0.00           C  
ATOM    336  CG  GLN    35      10.084   1.475  -2.430  1.00  0.00           C  
ATOM    337  CD  GLN    35      10.429   0.073  -1.993  1.00  0.00           C  
ATOM    338  OE1 GLN    35      10.330  -0.874  -2.807  1.00  0.00           O  
ATOM    339  NE2 GLN    35      11.159  -0.045  -0.882  1.00  0.00           N  
ATOM    340  HN  GLN    35       6.610   3.365  -1.891  1.00  0.00           H  
ATOM    341 1HNE GLN    35      11.535   0.758  -0.457  1.00  0.00           H  
ATOM    342 2HNE GLN    35      11.363  -0.958  -0.560  1.00  0.00           H  
ATOM    343  N   GLU    36       6.402   0.267  -3.325  1.00  0.00           N  
ATOM    344  CA  GLU    36       5.924  -1.020  -3.894  1.00  0.00           C  
ATOM    345  C   GLU    36       4.883  -0.823  -4.966  1.00  0.00           C  
ATOM    346  O   GLU    36       4.343  -1.801  -5.488  1.00  0.00           O  
ATOM    347  CB  GLU    36       5.325  -1.886  -2.761  1.00  0.00           C  
ATOM    348  CG  GLU    36       6.322  -2.708  -1.999  1.00  0.00           C  
ATOM    349  CD  GLU    36       5.891  -4.128  -1.700  1.00  0.00           C  
ATOM    350  OE1 GLU    36       5.983  -4.621  -0.565  1.00  0.00           O  
ATOM    351  OE2 GLU    36       5.581  -4.840  -2.698  1.00  0.00           O  
ATOM    352  HN  GLU    36       6.321   0.380  -2.335  1.00  0.00           H  
ATOM    353  N   TYR    37       4.431   0.421  -5.176  1.00  0.00           N  
ATOM    354  CA  TYR    37       3.539   0.747  -6.263  1.00  0.00           C  
ATOM    355  C   TYR    37       4.284   0.852  -7.585  1.00  0.00           C  
ATOM    356  O   TYR    37       4.313  -0.065  -8.432  1.00  0.00           O  
ATOM    357  CB  TYR    37       2.806   2.088  -6.001  1.00  0.00           C  
ATOM    358  CG  TYR    37       1.466   2.203  -6.702  1.00  0.00           C  
ATOM    359  CD1 TYR    37       1.364   2.728  -7.996  1.00  0.00           C  
ATOM    360  CD2 TYR    37       0.288   2.062  -5.987  1.00  0.00           C  
ATOM    361  CE1 TYR    37       0.126   3.164  -8.499  1.00  0.00           C  
ATOM    362  CE2 TYR    37      -0.955   2.450  -6.496  1.00  0.00           C  
ATOM    363  CZ  TYR    37      -1.027   3.044  -7.742  1.00  0.00           C  
ATOM    364  OH  TYR    37      -2.173   3.667  -8.150  1.00  0.00           O  
ATOM    365  HN  TYR    37       4.654   1.149  -4.505  1.00  0.00           H  
ATOM    366  HO  TYR    37      -2.775   2.970  -8.579  1.00  0.00           H  
ATOM    367  N   LEU    38       5.338   1.699  -7.540  1.00  0.00           N  
ATOM    368  CA  LEU    38       6.041   1.985  -8.805  1.00  0.00           C  
ATOM    369  C   LEU    38       6.927   0.773  -9.144  1.00  0.00           C  
ATOM    370  O   LEU    38       7.014   0.378 -10.317  1.00  0.00           O  
ATOM    371  CB  LEU    38       6.945   3.227  -8.627  1.00  0.00           C  
ATOM    372  CG  LEU    38       6.208   4.462  -8.176  1.00  0.00           C  
ATOM    373  CD1 LEU    38       7.098   5.376  -7.359  1.00  0.00           C  
ATOM    374  CD2 LEU    38       5.788   5.338  -9.372  1.00  0.00           C  
ATOM    375  HN  LEU    38       5.372   2.390  -6.820  1.00  0.00           H  
ATOM    376  N   LYS    39       7.756   0.385  -8.181  1.00  0.00           N  
ATOM    377  CA  LYS    39       8.439  -0.915  -8.320  1.00  0.00           C  
ATOM    378  C   LYS    39       7.455  -2.080  -8.242  1.00  0.00           C  
ATOM    379  O   LYS    39       7.251  -2.730  -7.207  1.00  0.00           O  
ATOM    380  CB  LYS    39       9.568  -1.035  -7.313  1.00  0.00           C  
ATOM    381  CG  LYS    39      10.323   0.264  -7.016  1.00  0.00           C  
ATOM    382  CD  LYS    39      11.207   0.694  -8.159  1.00  0.00           C  
ATOM    383  CE  LYS    39      12.642   0.939  -7.660  1.00  0.00           C  
ATOM    384  NZ  LYS    39      13.644   0.792  -8.737  1.00  0.00           N  
ATOM    385  HN  LYS    39       7.683   0.805  -7.297  1.00  0.00           H  
ATOM    386  HZ1 LYS    39      13.699  -0.197  -8.977  1.00  0.00           H  
ATOM    387  HZ2 LYS    39      13.288   1.285  -9.528  1.00  0.00           H  
ATOM    388  HZ3 LYS    39      14.524   1.109  -8.434  1.00  0.00           H  
ATOM    389  N   GLY    40       6.894  -2.463  -9.391  1.00  0.00           N  
ATOM    390  CA  GLY    40       5.820  -3.426  -9.399  1.00  0.00           C  
ATOM    391  C   GLY    40       4.797  -3.125 -10.519  1.00  0.00           C  
ATOM    392  O   GLY    40       4.341  -4.060 -11.162  1.00  0.00           O  
ATOM    393  HN  GLY    40       7.195  -2.051 -10.270  1.00  0.00           H  
TER
END
