
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   70 (  280),  selected   65 , name T0347AL243_2
# Molecule2: number of CA atoms  196 ( 1574),  selected   65 , name T0347.pdb
# PARAMETERS: T0347AL243_2.T0347.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    42        48 - 89          4.78    10.39
  LCS_AVERAGE:     16.21

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    32        58 - 89          1.81    11.05
  LCS_AVERAGE:      9.52

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    29        61 - 89          0.97    11.19
  LCS_AVERAGE:      8.12

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  196
LCS_GDT     P       7     P       7      9    9   13     4    8   10   11   11   12   13   15   15   17   19   24   30   37   39   41   43   47   48   50 
LCS_GDT     R       8     R       8      9    9   13     4    8   10   11   11   12   13   15   15   17   19   24   30   35   39   41   43   47   48   50 
LCS_GDT     L       9     L       9      9    9   13     4    8   10   11   11   12   13   15   15   17   19   25   30   37   39   41   43   47   48   50 
LCS_GDT     S      10     S      10      9    9   13     4    8   10   11   11   12   13   15   15   17   19   23   25   33   38   41   43   47   48   49 
LCS_GDT     R      11     R      11      9    9   13     4    8   10   11   11   12   13   15   15   17   19   23   25   28   38   41   43   47   48   49 
LCS_GDT     I      12     I      12      9    9   13     4    8   10   11   11   12   13   15   15   16   19   23   25   28   30   31   42   47   48   49 
LCS_GDT     A      13     A      13      9    9   13     4    8   10   11   11   12   13   15   15   15   18   23   25   28   30   31   34   37   48   49 
LCS_GDT     I      14     I      14      9    9   13     4    8   10   11   11   12   13   15   15   16   19   23   25   28   30   31   42   47   48   49 
LCS_GDT     D      15     D      15      9    9   13     3    3    9   11   11   12   13   15   15   17   19   23   25   28   38   41   43   47   48   49 
LCS_GDT     K      16     K      16      3    4   13     3    3    4    4    5    6   11   13   16   23   30   34   36   39   39   41   44   47   48   50 
LCS_GDT     L      17     L      17      3    4   13     3    3    4    4    7    7   11   14   24   31   35   38   38   40   41   42   44   47   48   50 
LCS_GDT     R      18     R      18      3    4   13     3    3    4    4    4    5    6    9   11   13   16   19   29   35   38   41   44   47   48   50 
LCS_GDT     P      19     P      19      0    0   13     0   20   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     R      33     R      33      3    3   13     0    3    3    3    4    6    6    6    7    9   16   18   22   24   27   29   33   39   41   45 
LCS_GDT     K      34     K      34      3    3   13     0    3    3    3    4    6    6    6   11   14   16   18   22   26   28   31   35   39   41   45 
LCS_GDT     E      35     E      35      3    3   13     0    3    3    3    4    6    7    9   11   13   16   18   22   26   28   34   36   42   47   50 
LCS_GDT     W      36     W      36      3    3   13     0    3    3    3    3    6    7    9   11   14   16   18   23   29   34   40   42   45   47   50 
LCS_GDT     R      37     R      37      3    4   13     3    3    3    4    4    4    7    9   11   14   16   19   22   29   33   38   42   45   47   50 
LCS_GDT     E      38     E      38      3    4   13     3    3    3    4    4    6    7    9   11   14   19   25   29   36   40   42   44   45   47   50 
LCS_GDT     T      39     T      39      3    4   13     3    3    3    4    4    4    7    9   12   16   21   25   29   36   40   42   44   45   47   50 
LCS_GDT     R      40     R      40      3    4   13     0    3    3    4    4    6    7    9   11   13   16   18   22   24   27   38   39   42   47   50 
LCS_GDT     D      46     D      46      3    6   14     3    3    3    4    6    6    6    9   11   14   16   18   24   27   29   35   42   45   47   50 
LCS_GDT     F      47     F      47      4    6   14     3    4    4    4    6    6    6    9   11   14   21   25   28   36   39   42   44   45   47   50 
LCS_GDT     L      48     L      48      4    6   42     3    4    4    4    7    8    8   13   16   19   25   34   37   40   41   42   44   45   47   50 
LCS_GDT     G      49     G      49      4    6   42     2    4    4    4    8   12   14   17   19   22   29   36   37   40   41   42   44   45   47   49 
LCS_GDT     N      50     N      50      4    6   42     3    4    4    4    6    6    7    9   10   13   18   34   37   40   41   42   44   45   47   49 
LCS_GDT     H      51     H      51      4    6   42     3    4    4    4    6    6    7    9   10   10   11   18   32   37   38   42   42   44   48   48 
LCS_GDT     I      52     I      52      4    4   42     3    4    4    4    4    6    6    7    8   11   14   16   25   32   38   40   42   43   44   45 
LCS_GDT     V      53     V      53      4    4   42     0    4    4    4    4    4    5    7    8    9   14   18   25   32   38   40   42   43   44   45 
LCS_GDT     P      54     P      54      4    6   42     1    4    5    5   12   27   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     V      55     V      55      4    6   42     3    4    5    5   10   20   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     V      56     V      56      4    6   42     3    4    5    5   10   14   27   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     A      57     A      57      4    6   42     3    4    4    5    7   14   17   24   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     G      58     G      58      4   32   42     3    4    5    5   15   22   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     P      59     P      59      4   32   42     3    4    5    5    8   20   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     K      60     K      60     24   32   42     3    9   30   31   31   31   33   34   35   37   37   38   38   40   41   42   43   47   48   49 
LCS_GDT     D      61     D      61     29   32   42     4    9   30   31   31   31   33   34   35   37   37   38   38   40   41   42   43   45   48   49 
LCS_GDT     R      62     R      62     29   32   42     3   13   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     A      63     A      63     29   32   42     3   19   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     Y      64     Y      64     29   32   42     4   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     L      65     L      65     29   32   42     4   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     I      66     I      66     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     D      67     D      67     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     H      68     H      68     29   32   42    12   20   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     H      69     H      69     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     H      70     H      70     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     L      71     L      71     29   32   42    11   20   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     V      72     V      72     29   32   42    12   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     L      73     L      73     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     A      74     A      74     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     L      75     L      75     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     S      76     S      76     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     K      77     K      77     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     E      78     E      78     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     G      79     G      79     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     V      80     V      80     29   32   42    13   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     E      81     E      81     29   32   42    11   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     H      82     H      82     29   32   42     9   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     V      83     V      83     29   32   42     9   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     L      84     L      84     29   32   42     5   20   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     T      85     T      85     29   32   42     9   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     S      86     S      86     29   32   42     3   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     E      87     E      87     29   32   42     4   22   30   31   31   31   33   34   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     V      88     V      88     29   32   42     3   20   30   31   31   31   31   33   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_GDT     A      89     A      89     29   32   42    13   22   30   31   31   31   31   33   35   37   37   38   38   40   41   42   44   47   48   50 
LCS_AVERAGE  LCS_A:  11.28  (   8.12    9.52   16.21 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     13     22     30     31     31     31     33     34     35     37     37     38     38     40     41     42     44     47     48     50 
GDT PERCENT_CA   6.63  11.22  15.31  15.82  15.82  15.82  16.84  17.35  17.86  18.88  18.88  19.39  19.39  20.41  20.92  21.43  22.45  23.98  24.49  25.51
GDT RMS_LOCAL    0.34   0.69   1.00   1.01   1.01   1.01   2.17   2.36   2.19   2.53   2.53   2.78   2.78   3.72   4.04   4.25   5.42   5.75   5.81   6.59
GDT RMS_ALL_CA  11.56  11.06  11.21  11.23  11.23  11.23  11.01  10.99  11.07  11.04  11.04  10.97  10.97  10.43  10.18  10.19   9.04   9.70   9.79   8.64

#      Molecule1      Molecule2       DISTANCE
LGA    P       7      P       7         15.612
LGA    R       8      R       8         16.695
LGA    L       9      L       9         15.852
LGA    S      10      S      10         16.205
LGA    R      11      R      11         16.525
LGA    I      12      I      12         16.489
LGA    A      13      A      13         17.793
LGA    I      14      I      14         15.134
LGA    D      15      D      15         15.585
LGA    K      16      K      16         10.867
LGA    L      17      L      17          7.243
LGA    R      18      R      18          9.938
LGA    P      19      P      19          1.643
LGA    R      33      R      33         21.841
LGA    K      34      K      34         23.284
LGA    E      35      E      35         21.608
LGA    W      36      W      36         18.190
LGA    R      37      R      37         19.529
LGA    E      38      E      38         18.617
LGA    T      39      T      39         18.980
LGA    R      40      R      40         21.972
LGA    D      46      D      46         20.591
LGA    F      47      F      47         16.514
LGA    L      48      L      48         12.271
LGA    G      49      G      49         10.741
LGA    N      50      N      50         10.625
LGA    H      51      H      51          9.107
LGA    I      52      I      52         11.089
LGA    V      53      V      53         10.739
LGA    P      54      P      54          2.946
LGA    V      55      V      55          3.441
LGA    V      56      V      56          3.984
LGA    A      57      A      57          4.432
LGA    G      58      G      58          2.697
LGA    P      59      P      59          3.351
LGA    K      60      K      60          3.605
LGA    D      61      D      61          3.522
LGA    R      62      R      62          2.929
LGA    A      63      A      63          3.106
LGA    Y      64      Y      64          3.077
LGA    L      65      L      65          2.868
LGA    I      66      I      66          3.371
LGA    D      67      D      67          3.208
LGA    H      68      H      68          3.464
LGA    H      69      H      69          2.315
LGA    H      70      H      70          2.395
LGA    L      71      L      71          3.218
LGA    V      72      V      72          2.608
LGA    L      73      L      73          1.700
LGA    A      74      A      74          2.222
LGA    L      75      L      75          2.256
LGA    S      76      S      76          1.224
LGA    K      77      K      77          1.455
LGA    E      78      E      78          1.961
LGA    G      79      G      79          1.542
LGA    V      80      V      80          1.801
LGA    E      81      E      81          1.870
LGA    H      82      H      82          2.098
LGA    V      83      V      83          2.135
LGA    L      84      L      84          2.327
LGA    T      85      T      85          2.410
LGA    S      86      S      86          3.217
LGA    E      87      E      87          3.353
LGA    V      88      V      88          5.322
LGA    A      89      A      89          5.115

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   70  196    4.0     34    2.36    16.454    15.097     1.383

LGA_LOCAL      RMSD =  2.359  Number of atoms =   34  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 10.919  Number of atoms =   65 
Std_ALL_ATOMS  RMSD =  8.530  (standard rmsd on all 65 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.231365 * X  +  -0.463512 * Y  +  -0.855352 * Z  +  37.634319
  Y_new =   0.714164 * X  +   0.516117 * Y  +  -0.472857 * Z  +  34.541256
  Z_new =   0.660637 * X  +  -0.720264 * Y  +   0.211612 * Z  +  18.155502 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -1.285040    1.856553  [ DEG:   -73.6273    106.3727 ]
  Theta =  -0.721666   -2.419926  [ DEG:   -41.3484   -138.6516 ]
  Phi   =   1.884093   -1.257500  [ DEG:   107.9506    -72.0494 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0347AL243_2                                  
REMARK     2: T0347.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0347AL243_2.T0347.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   70  196   4.0   34   2.36  15.097     8.53
REMARK  ---------------------------------------------------------- 
MOLECULE T0347AL243_2
REMARK Aligment from pdb entry: 1vk1A
ATOM      1  N   PRO     7      24.647  30.915   4.964  1.00  0.00              
ATOM      2  CA  PRO     7      23.810  29.734   4.565  1.00  0.00              
ATOM      3  C   PRO     7      24.144  29.277   3.131  1.00  0.00              
ATOM      4  O   PRO     7      24.612  30.080   2.323  1.00  0.00              
ATOM      5  N   ARG     8      23.905  27.997   2.824  1.00  0.00              
ATOM      6  CA  ARG     8      24.243  27.446   1.513  1.00  0.00              
ATOM      7  C   ARG     8      23.331  27.925   0.400  1.00  0.00              
ATOM      8  O   ARG     8      22.171  28.203   0.634  1.00  0.00              
ATOM      9  N   LEU     9      23.878  28.019  -0.805  1.00  0.00              
ATOM     10  CA  LEU     9      23.083  28.207  -2.008  1.00  0.00              
ATOM     11  C   LEU     9      22.604  26.835  -2.444  1.00  0.00              
ATOM     12  O   LEU     9      23.342  25.845  -2.352  1.00  0.00              
ATOM     13  N   SER    10      21.357  26.762  -2.884  1.00  0.00              
ATOM     14  CA  SER    10      20.759  25.499  -3.284  1.00  0.00              
ATOM     15  C   SER    10      19.991  25.710  -4.576  1.00  0.00              
ATOM     16  O   SER    10      19.192  26.645  -4.675  1.00  0.00              
ATOM     17  N   ARG    11      20.239  24.867  -5.575  1.00  0.00              
ATOM     18  CA  ARG    11      19.405  24.862  -6.775  1.00  0.00              
ATOM     19  C   ARG    11      18.082  24.234  -6.396  1.00  0.00              
ATOM     20  O   ARG    11      18.028  23.066  -6.005  1.00  0.00              
ATOM     21  N   ILE    12      17.011  25.011  -6.492  1.00  0.00              
ATOM     22  CA  ILE    12      15.690  24.503  -6.171  1.00  0.00              
ATOM     23  C   ILE    12      14.853  24.494  -7.434  1.00  0.00              
ATOM     24  O   ILE    12      15.080  25.280  -8.357  1.00  0.00              
ATOM     25  N   ALA    13      13.917  23.566  -7.501  1.00  0.00              
ATOM     26  CA  ALA    13      13.072  23.463  -8.659  1.00  0.00              
ATOM     27  C   ALA    13      12.016  24.537  -8.538  1.00  0.00              
ATOM     28  O   ALA    13      11.393  24.680  -7.488  1.00  0.00              
ATOM     29  N   ILE    14      11.848  25.313  -9.594  1.00  0.00              
ATOM     30  CA  ILE    14      10.806  26.330  -9.630  1.00  0.00              
ATOM     31  C   ILE    14       9.631  25.837 -10.461  1.00  0.00              
ATOM     32  O   ILE    14       9.719  24.804 -11.148  1.00  0.00              
ATOM     33  N   ASP    15       8.533  26.554 -10.354  1.00  0.00              
ATOM     34  CA  ASP    15       7.349  26.316 -11.137  1.00  0.00              
ATOM     35  C   ASP    15       6.816  27.670 -11.590  1.00  0.00              
ATOM     36  O   ASP    15       6.894  28.647 -10.847  1.00  0.00              
ATOM     37  N   LYS    16       6.280  27.742 -12.803  1.00  0.00              
ATOM     38  CA  LYS    16       5.645  28.965 -13.246  1.00  0.00              
ATOM     39  C   LYS    16       4.297  29.072 -12.573  1.00  0.00              
ATOM     40  O   LYS    16       3.556  28.075 -12.519  1.00  0.00              
ATOM     41  N   LEU    17       3.995  30.255 -12.043  1.00  0.00              
ATOM     42  CA  LEU    17       2.706  30.560 -11.411  1.00  0.00              
ATOM     43  C   LEU    17       2.152  31.799 -12.065  1.00  0.00              
ATOM     44  O   LEU    17       2.883  32.751 -12.322  1.00  0.00              
ATOM     45  N   ARG    18       0.848  31.802 -12.314  1.00  0.00              
ATOM     46  CA  ARG    18       0.208  32.956 -12.881  1.00  0.00              
ATOM     47  C   ARG    18       0.202  34.133 -11.894  1.00  0.00              
ATOM     48  O   ARG    18      -0.121  33.986 -10.700  1.00  0.00              
ATOM     49  N   PRO    19      -0.111  40.356  -2.647  1.00  0.00              
ATOM     50  CA  PRO    19       0.916  41.087  -1.937  1.00  0.00              
ATOM     51  C   PRO    19       0.596  41.206  -0.455  1.00  0.00              
ATOM     52  O   PRO    19      -0.575  41.157  -0.049  1.00  0.00              
ATOM     53  N   ARG    33       1.628  41.402   0.339  1.00  0.00              
ATOM     54  CA  ARG    33       1.450  41.789   1.733  1.00  0.00              
ATOM     55  C   ARG    33       2.095  43.114   2.109  1.00  0.00              
ATOM     56  O   ARG    33       2.007  43.518   3.250  1.00  0.00              
ATOM     57  N   LYS    34       2.742  43.785   1.159  1.00  0.00              
ATOM     58  CA  LYS    34       3.311  45.081   1.424  1.00  0.00              
ATOM     59  C   LYS    34       3.274  45.939   0.181  1.00  0.00              
ATOM     60  O   LYS    34       3.182  45.416  -0.938  1.00  0.00              
ATOM     61  N   GLU    35       3.337  47.255   0.387  1.00  0.00              
ATOM     62  CA  GLU    35       3.363  48.256  -0.661  1.00  0.00              
ATOM     63  C   GLU    35       4.747  48.321  -1.317  1.00  0.00              
ATOM     64  O   GLU    35       5.703  47.716  -0.841  1.00  0.00              
ATOM     65  N   TRP    36       4.830  49.095  -2.392  1.00  0.00              
ATOM     66  CA  TRP    36       6.039  49.203  -3.202  1.00  0.00              
ATOM     67  C   TRP    36       6.809  50.487  -2.955  1.00  0.00              
ATOM     68  O   TRP    36       6.240  51.494  -2.536  1.00  0.00              
ATOM     69  N   ARG    37       8.103  50.429  -3.271  1.00  0.00              
ATOM     70  CA  ARG    37       8.993  51.603  -3.369  1.00  0.00              
ATOM     71  C   ARG    37       9.135  51.932  -4.858  1.00  0.00              
ATOM     72  O   ARG    37       9.518  51.063  -5.662  1.00  0.00              
ATOM     73  N   GLU    38       8.784  53.152  -5.258  1.00  0.00              
ATOM     74  CA  GLU    38       8.778  53.489  -6.682  1.00  0.00              
ATOM     75  C   GLU    38      10.130  53.214  -7.353  1.00  0.00              
ATOM     76  O   GLU    38      10.178  52.654  -8.453  1.00  0.00              
ATOM     77  N   THR    39      11.222  53.576  -6.697  1.00  0.00              
ATOM     78  CA  THR    39      12.529  53.378  -7.290  1.00  0.00              
ATOM     79  C   THR    39      12.816  51.906  -7.528  1.00  0.00              
ATOM     80  O   THR    39      13.391  51.534  -8.547  1.00  0.00              
ATOM     81  N   ARG    40      12.428  51.058  -6.585  1.00  0.00              
ATOM     82  CA  ARG    40      12.658  49.620  -6.728  1.00  0.00              
ATOM     83  C   ARG    40      11.816  49.006  -7.861  1.00  0.00              
ATOM     84  O   ARG    40      12.279  48.120  -8.578  1.00  0.00              
ATOM     85  N   LYS    41      10.592  49.491  -8.024  1.00  0.00              
ATOM     86  CA  LYS    41       9.734  49.045  -9.100  1.00  0.00              
ATOM     87  C   LYS    41      10.326  49.422 -10.452  1.00  0.00              
ATOM     88  O   LYS    41      10.451  48.586 -11.353  1.00  0.00              
ATOM     89  N   LYS    42      10.712  50.677 -10.583  1.00  0.00              
ATOM     90  CA  LYS    42      11.251  51.174 -11.843  1.00  0.00              
ATOM     91  C   LYS    42      12.595  50.544 -12.169  1.00  0.00              
ATOM     92  O   LYS    42      12.852  50.201 -13.318  1.00  0.00              
ATOM     93  N   ASP    43      13.449  50.347 -11.162  1.00  0.00              
ATOM     94  CA  ASP    43      14.713  49.689 -11.381  1.00  0.00              
ATOM     95  C   ASP    43      14.534  48.237 -11.855  1.00  0.00              
ATOM     96  O   ASP    43      15.257  47.791 -12.756  1.00  0.00              
ATOM     97  N   GLY    44      13.604  47.498 -11.245  1.00  0.00              
ATOM     98  CA  GLY    44      13.341  46.142 -11.684  1.00  0.00              
ATOM     99  C   GLY    44      12.908  46.150 -13.163  1.00  0.00              
ATOM    100  O   GLY    44      13.391  45.356 -13.978  1.00  0.00              
ATOM    101  N   ASP    45      11.968  47.034 -13.507  1.00  0.00              
ATOM    102  CA  ASP    45      11.463  47.065 -14.885  1.00  0.00              
ATOM    103  C   ASP    45      12.605  47.366 -15.859  1.00  0.00              
ATOM    104  O   ASP    45      12.727  46.726 -16.892  1.00  0.00              
ATOM    105  N   ASP    46      13.435  48.344 -15.520  1.00  0.00              
ATOM    106  CA  ASP    46      14.590  48.679 -16.355  1.00  0.00              
ATOM    107  C   ASP    46      15.543  47.502 -16.518  1.00  0.00              
ATOM    108  O   ASP    46      16.033  47.245 -17.620  1.00  0.00              
ATOM    109  N   PHE    47      15.836  46.803 -15.420  1.00  0.00              
ATOM    110  CA  PHE    47      16.774  45.684 -15.456  1.00  0.00              
ATOM    111  C   PHE    47      16.249  44.488 -16.269  1.00  0.00              
ATOM    112  O   PHE    47      16.978  43.902 -17.079  1.00  0.00              
ATOM    113  N   LEU    48      15.011  44.100 -16.043  1.00  0.00              
ATOM    114  CA  LEU    48      14.482  42.925 -16.701  1.00  0.00              
ATOM    115  C   LEU    48      14.318  43.177 -18.190  1.00  0.00              
ATOM    116  O   LEU    48      14.580  42.287 -18.992  1.00  0.00              
ATOM    117  N   GLY    49      13.909  44.384 -18.569  1.00  0.00              
ATOM    118  CA  GLY    49      13.770  44.702 -19.998  1.00  0.00              
ATOM    119  C   GLY    49      15.128  44.901 -20.652  1.00  0.00              
ATOM    120  O   GLY    49      15.320  44.494 -21.797  1.00  0.00              
ATOM    121  N   ASN    50      16.091  45.478 -19.938  1.00  0.00              
ATOM    122  CA  ASN    50      17.415  45.682 -20.508  1.00  0.00              
ATOM    123  C   ASN    50      18.208  44.403 -20.682  1.00  0.00              
ATOM    124  O   ASN    50      18.891  44.221 -21.697  1.00  0.00              
ATOM    125  N   HIS    51      18.132  43.515 -19.694  1.00  0.00              
ATOM    126  CA  HIS    51      18.854  42.249 -19.747  1.00  0.00              
ATOM    127  C   HIS    51      18.087  41.170 -20.473  1.00  0.00              
ATOM    128  O   HIS    51      18.672  40.214 -20.972  1.00  0.00              
ATOM    129  N   ILE    52      16.763  41.292 -20.500  1.00  0.00              
ATOM    130  CA  ILE    52      15.906  40.248 -21.042  1.00  0.00              
ATOM    131  C   ILE    52      15.789  38.979 -20.222  1.00  0.00              
ATOM    132  O   ILE    52      15.229  38.007 -20.696  1.00  0.00              
ATOM    133  N   VAL    53      16.290  38.978 -18.977  1.00  0.00              
ATOM    134  CA  VAL    53      16.354  37.762 -18.173  1.00  0.00              
ATOM    135  C   VAL    53      15.759  38.007 -16.796  1.00  0.00              
ATOM    136  O   VAL    53      16.076  39.000 -16.154  1.00  0.00              
ATOM    137  N   PRO    54      13.717  33.906  -8.549  1.00  0.00              
ATOM    138  CA  PRO    54      12.344  33.386  -8.505  1.00  0.00              
ATOM    139  C   PRO    54      11.520  34.085  -7.439  1.00  0.00              
ATOM    140  O   PRO    54      12.053  34.520  -6.418  1.00  0.00              
ATOM    141  N   VAL    55      10.229  34.186  -7.677  1.00  0.00              
ATOM    142  CA  VAL    55       9.312  34.552  -6.621  1.00  0.00              
ATOM    143  C   VAL    55       9.405  33.525  -5.515  1.00  0.00              
ATOM    144  O   VAL    55       9.619  32.349  -5.788  1.00  0.00              
ATOM    145  N   VAL    56       9.214  33.956  -4.278  1.00  0.00              
ATOM    146  CA  VAL    56       8.947  33.032  -3.166  1.00  0.00              
ATOM    147  C   VAL    56       7.506  33.213  -2.771  1.00  0.00              
ATOM    148  O   VAL    56       7.075  34.342  -2.507  1.00  0.00              
ATOM    149  N   ALA    57       6.761  32.098  -2.773  1.00  0.00              
ATOM    150  CA  ALA    57       5.336  32.091  -2.537  1.00  0.00              
ATOM    151  C   ALA    57       4.968  31.077  -1.479  1.00  0.00              
ATOM    152  O   ALA    57       5.693  30.116  -1.248  1.00  0.00              
ATOM    153  N   GLY    58       3.799  31.255  -0.883  1.00  0.00              
ATOM    154  CA  GLY    58       3.206  30.262   0.021  1.00  0.00              
ATOM    155  C   GLY    58       1.716  30.228  -0.222  1.00  0.00              
ATOM    156  O   GLY    58       1.081  31.268  -0.341  1.00  0.00              
ATOM    157  N   PRO    59       1.135  29.052  -0.294  1.00  0.00              
ATOM    158  CA  PRO    59      -0.299  28.972  -0.534  1.00  0.00              
ATOM    159  C   PRO    59      -1.079  29.530   0.665  1.00  0.00              
ATOM    160  O   PRO    59      -0.755  29.276   1.820  1.00  0.00              
ATOM    161  N   LYS    60      -7.624  28.395  -0.246  1.00  0.00              
ATOM    162  CA  LYS    60      -7.677  29.016  -1.558  1.00  0.00              
ATOM    163  C   LYS    60      -6.709  28.341  -2.480  1.00  0.00              
ATOM    164  O   LYS    60      -5.860  27.564  -2.051  1.00  0.00              
ATOM    165  N   ASP    61      -6.794  28.697  -3.758  1.00  0.00              
ATOM    166  CA  ASP    61      -5.739  28.368  -4.703  1.00  0.00              
ATOM    167  C   ASP    61      -4.907  29.626  -5.060  1.00  0.00              
ATOM    168  O   ASP    61      -4.374  29.748  -6.153  1.00  0.00              
ATOM    169  N   ARG    62      -4.777  30.527  -4.102  1.00  0.00              
ATOM    170  CA  ARG    62      -4.005  31.752  -4.247  1.00  0.00              
ATOM    171  C   ARG    62      -2.755  31.647  -3.374  1.00  0.00              
ATOM    172  O   ARG    62      -2.687  30.812  -2.463  1.00  0.00              
ATOM    173  N   ALA    63      -1.791  32.522  -3.641  1.00  0.00              
ATOM    174  CA  ALA    63      -0.513  32.518  -2.964  1.00  0.00              
ATOM    175  C   ALA    63      -0.203  33.853  -2.326  1.00  0.00              
ATOM    176  O   ALA    63      -0.397  34.915  -2.933  1.00  0.00              
ATOM    177  N   TYR    64       0.300  33.788  -1.102  1.00  0.00              
ATOM    178  CA  TYR    64       0.997  34.884  -0.473  1.00  0.00              
ATOM    179  C   TYR    64       2.319  35.099  -1.165  1.00  0.00              
ATOM    180  O   TYR    64       3.096  34.170  -1.304  1.00  0.00              
ATOM    181  N   LEU    65       2.595  36.340  -1.573  1.00  0.00              
ATOM    182  CA  LEU    65       3.929  36.711  -1.992  1.00  0.00              
ATOM    183  C   LEU    65       4.767  36.809  -0.721  1.00  0.00              
ATOM    184  O   LEU    65       4.531  37.652   0.111  1.00  0.00              
ATOM    185  N   ILE    66       5.757  35.939  -0.606  1.00  0.00              
ATOM    186  CA  ILE    66       6.708  35.974   0.511  1.00  0.00              
ATOM    187  C   ILE    66       7.811  36.963   0.135  1.00  0.00              
ATOM    188  O   ILE    66       8.123  37.856   0.883  1.00  0.00              
ATOM    189  N   ASP    67       8.386  36.780  -1.048  1.00  0.00              
ATOM    190  CA  ASP    67       9.410  37.651  -1.572  1.00  0.00              
ATOM    191  C   ASP    67       9.187  37.854  -3.053  1.00  0.00              
ATOM    192  O   ASP    67       8.961  36.898  -3.781  1.00  0.00              
ATOM    193  N   HIS    68       9.275  39.105  -3.484  1.00  0.00              
ATOM    194  CA  HIS    68       9.169  39.452  -4.898  1.00  0.00              
ATOM    195  C   HIS    68       8.051  40.405  -5.271  1.00  0.00              
ATOM    196  O   HIS    68       7.599  40.399  -6.409  1.00  0.00              
ATOM    197  N   HIS    69       7.632  41.282  -4.368  1.00  0.00              
ATOM    198  CA  HIS    69       6.583  42.245  -4.680  1.00  0.00              
ATOM    199  C   HIS    69       6.913  43.121  -5.875  1.00  0.00              
ATOM    200  O   HIS    69       6.063  43.353  -6.726  1.00  0.00              
ATOM    201  N   HIS    70       8.138  43.626  -5.945  1.00  0.00              
ATOM    202  CA  HIS    70       8.511  44.517  -7.030  1.00  0.00              
ATOM    203  C   HIS    70       8.623  43.778  -8.346  1.00  0.00              
ATOM    204  O   HIS    70       8.259  44.333  -9.400  1.00  0.00              
ATOM    205  N   LEU    71       9.097  42.535  -8.301  1.00  0.00              
ATOM    206  CA  LEU    71       9.134  41.670  -9.485  1.00  0.00              
ATOM    207  C   LEU    71       7.743  41.347 -10.010  1.00  0.00              
ATOM    208  O   LEU    71       7.462  41.489 -11.203  1.00  0.00              
ATOM    209  N   VAL    72       6.837  40.966  -9.115  1.00  0.00              
ATOM    210  CA  VAL    72       5.445  40.702  -9.482  1.00  0.00              
ATOM    211  C   VAL    72       4.778  41.935 -10.066  1.00  0.00              
ATOM    212  O   VAL    72       4.171  41.879 -11.144  1.00  0.00              
ATOM    213  N   LEU    73       4.909  43.063  -9.386  1.00  0.00              
ATOM    214  CA  LEU    73       4.247  44.270  -9.823  1.00  0.00              
ATOM    215  C   LEU    73       4.847  44.777 -11.137  1.00  0.00              
ATOM    216  O   LEU    73       4.123  45.270 -12.004  1.00  0.00              
ATOM    217  N   ALA    74       6.166  44.659 -11.294  1.00  0.00              
ATOM    218  CA  ALA    74       6.805  45.068 -12.530  1.00  0.00              
ATOM    219  C   ALA    74       6.375  44.212 -13.706  1.00  0.00              
ATOM    220  O   ALA    74       6.085  44.726 -14.791  1.00  0.00              
ATOM    221  N   LEU    75       6.305  42.909 -13.494  1.00  0.00              
ATOM    222  CA  LEU    75       5.838  42.013 -14.529  1.00  0.00              
ATOM    223  C   LEU    75       4.384  42.295 -14.898  1.00  0.00              
ATOM    224  O   LEU    75       4.029  42.259 -16.077  1.00  0.00              
ATOM    225  N   SER    76       3.538  42.543 -13.911  1.00  0.00              
ATOM    226  CA  SER    76       2.154  42.893 -14.203  1.00  0.00              
ATOM    227  C   SER    76       2.088  44.175 -15.013  1.00  0.00              
ATOM    228  O   SER    76       1.344  44.251 -15.999  1.00  0.00              
ATOM    229  N   LYS    77       2.883  45.172 -14.639  1.00  0.00              
ATOM    230  CA  LYS    77       2.899  46.452 -15.368  1.00  0.00              
ATOM    231  C   LYS    77       3.340  46.254 -16.815  1.00  0.00              
ATOM    232  O   LYS    77       2.824  46.929 -17.731  1.00  0.00              
ATOM    233  N   GLU    78       4.271  45.331 -17.043  1.00  0.00              
ATOM    234  CA  GLU    78       4.761  45.031 -18.391  1.00  0.00              
ATOM    235  C   GLU    78       3.786  44.189 -19.219  1.00  0.00              
ATOM    236  O   GLU    78       3.989  44.007 -20.424  1.00  0.00              
ATOM    237  N   GLY    79       2.748  43.665 -18.592  1.00  0.00              
ATOM    238  CA  GLY    79       1.755  42.839 -19.266  1.00  0.00              
ATOM    239  C   GLY    79       2.071  41.350 -19.312  1.00  0.00              
ATOM    240  O   GLY    79       1.463  40.629 -20.086  1.00  0.00              
ATOM    241  N   VAL    80       2.978  40.869 -18.454  1.00  0.00              
ATOM    242  CA  VAL    80       3.302  39.465 -18.408  1.00  0.00              
ATOM    243  C   VAL    80       2.188  38.683 -17.731  1.00  0.00              
ATOM    244  O   VAL    80       1.283  39.274 -17.126  1.00  0.00              
ATOM    245  N   GLU    81       2.282  37.366 -17.809  1.00  0.00              
ATOM    246  CA  GLU    81       1.270  36.466 -17.290  1.00  0.00              
ATOM    247  C   GLU    81       1.713  35.582 -16.145  1.00  0.00              
ATOM    248  O   GLU    81       0.888  35.208 -15.334  1.00  0.00              
ATOM    249  N   HIS    82       2.993  35.208 -16.103  1.00  0.00              
ATOM    250  CA  HIS    82       3.460  34.218 -15.151  1.00  0.00              
ATOM    251  C   HIS    82       4.849  34.576 -14.667  1.00  0.00              
ATOM    252  O   HIS    82       5.530  35.397 -15.288  1.00  0.00              
ATOM    253  N   VAL    83       5.270  33.955 -13.568  1.00  0.00              
ATOM    254  CA  VAL    83       6.641  34.101 -13.122  1.00  0.00              
ATOM    255  C   VAL    83       7.117  32.801 -12.495  1.00  0.00              
ATOM    256  O   VAL    83       6.361  32.119 -11.802  1.00  0.00              
ATOM    257  N   LEU    84       8.395  32.461 -12.690  1.00  0.00              
ATOM    258  CA  LEU    84       8.982  31.319 -11.996  1.00  0.00              
ATOM    259  C   LEU    84       9.027  31.553 -10.490  1.00  0.00              
ATOM    260  O   LEU    84       9.421  32.631 -10.048  1.00  0.00              
ATOM    261  N   THR    85       8.620  30.537  -9.747  1.00  0.00              
ATOM    262  CA  THR    85       8.349  30.641  -8.339  1.00  0.00              
ATOM    263  C   THR    85       8.814  29.402  -7.572  1.00  0.00              
ATOM    264  O   THR    85       8.790  28.288  -8.076  1.00  0.00              
ATOM    265  N   SER    86       9.186  29.631  -6.324  1.00  0.00              
ATOM    266  CA  SER    86       9.456  28.568  -5.372  1.00  0.00              
ATOM    267  C   SER    86       8.322  28.616  -4.372  1.00  0.00              
ATOM    268  O   SER    86       8.054  29.669  -3.802  1.00  0.00              
ATOM    269  N   GLU    87       7.666  27.483  -4.155  1.00  0.00              
ATOM    270  CA  GLU    87       6.536  27.377  -3.249  1.00  0.00              
ATOM    271  C   GLU    87       7.024  26.830  -1.894  1.00  0.00              
ATOM    272  O   GLU    87       7.603  25.751  -1.838  1.00  0.00              
ATOM    273  N   VAL    88       6.806  27.595  -0.840  1.00  0.00              
ATOM    274  CA  VAL    88       7.252  27.321   0.513  1.00  0.00              
ATOM    275  C   VAL    88       6.071  26.911   1.385  1.00  0.00              
ATOM    276  O   VAL    88       4.921  27.287   1.115  1.00  0.00              
ATOM    277  N   ALA    89       6.356  26.153   2.446  1.00  0.00              
ATOM    278  CA  ALA    89       5.425  26.012   3.560  1.00  0.00              
ATOM    279  C   ALA    89       5.754  27.156   4.509  1.00  0.00              
ATOM    280  O   ALA    89       6.782  27.130   5.166  1.00  0.00              
END
