
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   45 (  364),  selected   45 , name T0363TS640_2-D1
# Molecule2: number of CA atoms   46 (  372),  selected   45 , name T0363_D1.pdb
# PARAMETERS: T0363TS640_2-D1.T0363_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    45        12 - 56          3.52     3.52
  LCS_AVERAGE:     97.83

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    33        12 - 44          1.68     4.25
  LCS_AVERAGE:     60.00

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    13        28 - 40          1.00     4.51
  LCS_AVERAGE:     22.32

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:   46
LCS_GDT     Q      12     Q      12      8   33   45     4   12   17   26   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      13     I      13      8   33   45     4    8   16   19   26   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     N      14     N      14      8   33   45     4   11   17   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      15     I      15      8   33   45     5   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     E      16     E      16      8   33   45     4   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      17     I      17      9   33   45     3   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     A      18     A      18      9   33   45     4   12   20   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Y      19     Y      19      9   33   45     3    6   17   25   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     A      20     A      20      9   33   45     4   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     F      21     F      21      9   33   45     4    8   20   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     P      22     P      22      9   33   45     4    5   17   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     E      23     E      23      9   33   45     4    7   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     R      24     R      24      9   33   45     4    8   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Y      25     Y      25      9   33   45     4   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Y      26     Y      26      9   33   45     3   11   17   23   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     L      27     L      27     12   33   45     5   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     K      28     K      28     13   33   45     6   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     S      29     S      29     13   33   45     6   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     F      30     F      30     13   33   45     4   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Q      31     Q      31     13   33   45     5   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     V      32     V      32     13   33   45     4   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     D      33     D      33     13   33   45     6   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     E      34     E      34     13   33   45     3    5   16   26   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     G      35     G      35     13   33   45     6   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      36     I      36     13   33   45     4   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     T      37     T      37     13   33   45     6   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     V      38     V      38     13   33   45     6   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Q      39     Q      39     13   33   45     5   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     T      40     T      40     13   33   45     5   11   20   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     A      41     A      41     11   33   45     5   12   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      42     I      42     11   33   45     5    9   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     T      43     T      43     11   33   45     5   11   22   27   31   33   33   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Q      44     Q      44      4   33   45     3    4    4    7   26   33   33   33   34   37   41   45   45   45   45   45   45   45   45   45 
LCS_GDT     S      45     S      45      4   32   45     3    4    4    4    7    8   14   25   30   34   40   45   45   45   45   45   45   45   45   45 
LCS_GDT     G      46     G      46     10   11   45     4    5   11   12   13   15   17   23   29   36   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      47     I      47     10   11   45     4    5   11   12   13   18   22   25   32   38   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     L      48     L      48     10   11   45     4    8   11   12   13   19   28   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     S      49     S      49     10   11   45     4    8   11   12   13   19   23   28   36   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     Q      50     Q      50     10   11   45     4    8   11   12   13   19   22   25   32   38   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     F      51     F      51     10   11   45     4    8   11   12   13   19   25   33   36   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     P      52     P      52     10   11   45     4    8   11   12   13   19   25   33   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     E      53     E      53     10   11   45     4    8   11   12   13   19   23   32   36   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     I      54     I      54     10   11   45     4    8   11   12   13   19   31   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     D      55     D      55     10   11   45     4    8   11   12   13   19   31   35   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_GDT     L      56     L      56     10   11   45     3    5    7   12   13   19   26   33   37   40   42   45   45   45   45   45   45   45   45   45 
LCS_AVERAGE  LCS_A:  60.05  (  22.32   60.00   97.83 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      6     12     22     27     31     33     33     35     37     40     42     45     45     45     45     45     45     45     45     45 
GDT PERCENT_CA  13.04  26.09  47.83  58.70  67.39  71.74  71.74  76.09  80.43  86.96  91.30  97.83  97.83  97.83  97.83  97.83  97.83  97.83  97.83  97.83
GDT RMS_LOCAL    0.33   0.68   1.15   1.32   1.52   1.68   1.68   2.29   2.57   2.95   3.18   3.52   3.52   3.52   3.52   3.52   3.52   3.52   3.52   3.52
GDT RMS_ALL_CA   4.38   4.47   4.24   4.27   4.19   4.25   4.25   3.75   3.66   3.57   3.55   3.52   3.52   3.52   3.52   3.52   3.52   3.52   3.52   3.52

#      Molecule1      Molecule2       DISTANCE
LGA    Q      12      Q      12          3.185
LGA    I      13      I      13          3.971
LGA    N      14      N      14          2.783
LGA    I      15      I      15          1.680
LGA    E      16      E      16          1.341
LGA    I      17      I      17          1.482
LGA    A      18      A      18          1.729
LGA    Y      19      Y      19          1.631
LGA    A      20      A      20          1.223
LGA    F      21      F      21          3.828
LGA    P      22      P      22          3.859
LGA    E      23      E      23          3.503
LGA    R      24      R      24          3.442
LGA    Y      25      Y      25          1.687
LGA    Y      26      Y      26          2.014
LGA    L      27      L      27          1.159
LGA    K      28      K      28          1.662
LGA    S      29      S      29          1.919
LGA    F      30      F      30          2.907
LGA    Q      31      Q      31          2.883
LGA    V      32      V      32          2.335
LGA    D      33      D      33          2.400
LGA    E      34      E      34          3.273
LGA    G      35      G      35          1.562
LGA    I      36      I      36          0.812
LGA    T      37      T      37          1.358
LGA    V      38      V      38          1.366
LGA    Q      39      Q      39          1.742
LGA    T      40      T      40          1.176
LGA    A      41      A      41          1.837
LGA    I      42      I      42          3.035
LGA    T      43      T      43          2.860
LGA    Q      44      Q      44          5.745
LGA    S      45      S      45          7.598
LGA    G      46      G      46          6.872
LGA    I      47      I      47          5.876
LGA    L      48      L      48          3.884
LGA    S      49      S      49          5.203
LGA    Q      50      Q      50          6.168
LGA    F      51      F      51          5.081
LGA    P      52      P      52          4.578
LGA    E      53      E      53          5.198
LGA    I      54      I      54          3.995
LGA    D      55      D      55          3.844
LGA    L      56      L      56          4.358

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   45   46    4.0     35    2.29    64.674    68.423     1.463

LGA_LOCAL      RMSD =  2.292  Number of atoms =   35  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.537  Number of atoms =   45 
Std_ALL_ATOMS  RMSD =  3.518  (standard rmsd on all 45 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.486259 * X  +  -0.383692 * Y  +   0.785069 * Z  +  19.944372
  Y_new =   0.562649 * X  +   0.824887 * Y  +   0.054656 * Z  +   0.297888
  Z_new =  -0.668564 * X  +   0.415141 * Y  +   0.616993 * Z  +  10.834601 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   0.592269   -2.549324  [ DEG:    33.9345   -146.0655 ]
  Theta =   0.732276    2.409317  [ DEG:    41.9563    138.0437 ]
  Phi   =   0.858098   -2.283494  [ DEG:    49.1654   -130.8346 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0363TS640_2-D1                               
REMARK     2: T0363_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0363TS640_2-D1.T0363_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   45   46   4.0   35   2.29  68.423     3.52
REMARK  ---------------------------------------------------------- 
MOLECULE T0363TS640_2-D1
PFRMAT TS
TARGET T0363
MODEL 2 REFINED
PARENT N/A
ATOM      1  N   GLN    12      19.750   2.088   9.252  1.00  1.00
ATOM      2  CA  GLN    12      20.365   2.945   8.244  1.00  1.00
ATOM      3  C   GLN    12      19.994   4.407   8.464  1.00  1.00
ATOM      4  O   GLN    12      18.822   4.776   8.395  1.00  1.00
ATOM      5  CB  GLN    12      19.911   2.533   6.841  1.00  1.00
ATOM      6  CG  GLN    12      20.312   1.121   6.448  1.00  1.00
ATOM      7  CD  GLN    12      21.815   0.944   6.366  1.00  1.00
ATOM      8  OE1 GLN    12      22.526   1.816   5.865  1.00  1.00
ATOM      9  NE2 GLN    12      22.305  -0.188   6.856  1.00  1.00
ATOM     10  N   ILE    13      21.000   5.233   8.729  1.00  1.00
ATOM     11  CA  ILE    13      20.783   6.659   8.940  1.00  1.00
ATOM     12  C   ILE    13      21.152   7.462   7.700  1.00  1.00
ATOM     13  O   ILE    13      22.331   7.661   7.405  1.00  1.00
ATOM     14  CB  ILE    13      21.622   7.191  10.117  1.00  1.00
ATOM     15  CG1 ILE    13      20.914   6.930  11.446  1.00  1.00
ATOM     16  CG2 ILE    13      21.848   8.698   9.983  1.00  1.00
ATOM     17  CD1 ILE    13      21.855   6.611  12.587  1.00  1.00
ATOM     18  N   ASN    14      20.138   7.922   6.974  1.00  1.00
ATOM     19  CA  ASN    14      20.373   8.635   5.727  1.00  1.00
ATOM     20  C   ASN    14      20.252  10.122   5.965  1.00  1.00
ATOM     21  O   ASN    14      19.171  10.609   6.363  1.00  1.00
ATOM     22  CB  ASN    14      19.376   8.226   4.657  1.00  1.00
ATOM     23  CG  ASN    14      19.206   9.283   3.585  1.00  1.00
ATOM     24  OD1 ASN    14      19.679  10.410   3.729  1.00  1.00
ATOM     25  ND2 ASN    14      18.528   8.921   2.502  1.00  1.00
ATOM     26  N   ILE    15      21.336  10.848   5.728  1.00  1.00
ATOM     27  CA  ILE    15      21.346  12.293   5.931  1.00  1.00
ATOM     28  C   ILE    15      21.579  12.991   4.607  1.00  1.00
ATOM     29  O   ILE    15      22.218  12.436   3.683  1.00  1.00
ATOM     30  CB  ILE    15      22.447  12.718   6.918  1.00  1.00
ATOM     31  CG1 ILE    15      23.832  12.522   6.300  1.00  1.00
ATOM     32  CG2 ILE    15      22.374  11.889   8.201  1.00  1.00
ATOM     33  CD1 ILE    15      24.894  13.429   6.880  1.00  1.00
ATOM     34  N   GLU    16      21.079  14.203   4.484  1.00  1.00
ATOM     35  CA  GLU    16      21.271  15.020   3.314  1.00  1.00
ATOM     36  C   GLU    16      22.356  16.009   3.638  1.00  1.00
ATOM     37  O   GLU    16      22.181  16.847   4.534  1.00  1.00
ATOM     38  CB  GLU    16      19.973  15.744   2.947  1.00  1.00
ATOM     39  CG  GLU    16      20.079  16.618   1.708  1.00  1.00
ATOM     40  CD  GLU    16      18.765  16.729   0.959  1.00  1.00
ATOM     41  OE1 GLU    16      17.703  16.593   1.600  1.00  1.00
ATOM     42  OE2 GLU    16      18.799  16.951  -0.270  1.00  1.00
ATOM     43  N   ILE    17      23.471  15.938   2.939  1.00  1.00
ATOM     44  CA  ILE    17      24.584  16.854   3.134  1.00  1.00
ATOM     45  C   ILE    17      24.536  17.955   2.104  1.00  1.00
ATOM     46  O   ILE    17      24.476  17.657   0.908  1.00  1.00
ATOM     47  CB  ILE    17      25.938  16.131   3.018  1.00  1.00
ATOM     48  CG1 ILE    17      26.019  14.972   4.011  1.00  1.00
ATOM     49  CG2 ILE    17      27.091  17.093   3.311  1.00  1.00
ATOM     50  CD1 ILE    17      25.872  15.394   5.456  1.00  1.00
ATOM     51  N   ALA    18      24.561  19.214   2.557  1.00  1.00
ATOM     52  CA  ALA    18      24.563  20.366   1.650  1.00  1.00
ATOM     53  C   ALA    18      25.900  21.056   1.786  1.00  1.00
ATOM     54  O   ALA    18      26.277  21.505   2.883  1.00  1.00
ATOM     55  CB  ALA    18      23.434  21.323   2.006  1.00  1.00
ATOM     56  N   TYR    19      26.623  21.147   0.681  1.00  1.00
ATOM     57  CA  TYR    19      27.912  21.843   0.648  1.00  1.00
ATOM     58  C   TYR    19      27.728  23.262   0.198  1.00  1.00
ATOM     59  O   TYR    19      26.848  23.561  -0.630  1.00  1.00
ATOM     60  CB  TYR    19      28.875  21.138  -0.310  1.00  1.00
ATOM     61  CG  TYR    19      29.483  19.874   0.253  1.00  1.00
ATOM     62  CD1 TYR    19      28.688  18.779   0.565  1.00  1.00
ATOM     63  CD2 TYR    19      30.852  19.779   0.471  1.00  1.00
ATOM     64  CE1 TYR    19      29.235  17.620   1.081  1.00  1.00
ATOM     65  CE2 TYR    19      31.417  18.628   0.985  1.00  1.00
ATOM     66  CZ  TYR    19      30.595  17.543   1.290  1.00  1.00
ATOM     67  OH  TYR    19      31.142  16.390   1.802  1.00  1.00
ATOM     68  N   ALA    20      28.569  24.145   0.751  1.00  1.00
ATOM     69  CA  ALA    20      28.502  25.558   0.436  1.00  1.00
ATOM     70  C   ALA    20      29.817  26.102  -0.051  1.00  1.00
ATOM     71  O   ALA    20      30.884  25.617   0.323  1.00  1.00
ATOM     72  CB  ALA    20      28.092  26.356   1.664  1.00  1.00
ATOM     73  N   PHE    21      29.730  27.126  -0.898  1.00  1.00
ATOM     74  CA  PHE    21      30.909  27.873  -1.321  1.00  1.00
ATOM     75  C   PHE    21      30.519  29.146  -2.061  1.00  1.00
ATOM     76  O   PHE    21      29.403  29.263  -2.570  1.00  1.00
ATOM     77  CB  PHE    21      31.779  27.021  -2.247  1.00  1.00
ATOM     78  CG  PHE    21      33.254  27.221  -2.047  1.00  1.00
ATOM     79  CD1 PHE    21      33.796  27.259  -0.774  1.00  1.00
ATOM     80  CD2 PHE    21      34.100  27.370  -3.132  1.00  1.00
ATOM     81  CE1 PHE    21      35.153  27.444  -0.590  1.00  1.00
ATOM     82  CE2 PHE    21      35.458  27.555  -2.948  1.00  1.00
ATOM     83  CZ  PHE    21      35.985  27.592  -1.684  1.00  1.00
ATOM     84  N   PRO    22      31.442  30.100  -2.119  1.00  1.00
ATOM     85  CA  PRO    22      31.191  31.371  -2.787  1.00  1.00
ATOM     86  C   PRO    22      30.767  31.158  -4.234  1.00  1.00
ATOM     87  O   PRO    22      29.833  31.800  -4.717  1.00  1.00
ATOM     88  CB  PRO    22      32.531  32.119  -2.688  1.00  1.00
ATOM     89  CG  PRO    22      32.883  32.064  -1.239  1.00  1.00
ATOM     90  CD  PRO    22      32.054  30.958  -0.650  1.00  1.00
ATOM     91  N   GLU    23      31.457  30.253  -4.920  1.00  1.00
ATOM     92  CA  GLU    23      31.229  30.036  -6.344  1.00  1.00
ATOM     93  C   GLU    23      31.110  28.552  -6.661  1.00  1.00
ATOM     94  O   GLU    23      31.586  28.087  -7.697  1.00  1.00
ATOM     95  CB  GLU    23      32.380  30.618  -7.166  1.00  1.00
ATOM     96  CG  GLU    23      32.583  32.113  -6.978  1.00  1.00
ATOM     97  CD  GLU    23      33.710  32.660  -7.832  1.00  1.00
ATOM     98  OE1 GLU    23      34.359  31.863  -8.541  1.00  1.00
ATOM     99  OE2 GLU    23      33.945  33.887  -7.791  1.00  1.00
ATOM    100  N   ARG    24      30.469  27.810  -5.763  1.00  1.00
ATOM    101  CA  ARG    24      30.272  26.378  -5.953  1.00  1.00
ATOM    102  C   ARG    24      29.388  25.793  -4.859  1.00  1.00
ATOM    103  O   ARG    24      29.205  26.400  -3.804  1.00  1.00
ATOM    104  CB  ARG    24      31.587  25.611  -5.942  1.00  1.00
ATOM    105  CG  ARG    24      32.317  25.651  -4.610  1.00  1.00
ATOM    106  CD  ARG    24      33.616  24.864  -4.668  1.00  1.00
ATOM    107  NE  ARG    24      34.419  25.042  -3.461  1.00  1.00
ATOM    108  CZ  ARG    24      34.270  24.323  -2.352  1.00  1.00
ATOM    109  NH1 ARG    24      35.047  24.555  -1.303  1.00  1.00
ATOM    110  NH2 ARG    24      33.347  23.373  -2.297  1.00  1.00
ATOM    111  N   TYR    25      28.841  24.610  -5.116  1.00  1.00
ATOM    112  CA  TYR    25      28.001  23.925  -4.140  1.00  1.00
ATOM    113  C   TYR    25      27.740  22.483  -4.553  1.00  1.00
ATOM    114  O   TYR    25      27.960  22.107  -5.705  1.00  1.00
ATOM    115  CB  TYR    25      26.655  24.641  -3.997  1.00  1.00
ATOM    116  CG  TYR    25      25.816  24.624  -5.255  1.00  1.00
ATOM    117  CD1 TYR    25      24.773  23.718  -5.402  1.00  1.00
ATOM    118  CD2 TYR    25      26.068  25.515  -6.290  1.00  1.00
ATOM    119  CE1 TYR    25      24.001  23.695  -6.547  1.00  1.00
ATOM    120  CE2 TYR    25      25.306  25.507  -7.443  1.00  1.00
ATOM    121  CZ  TYR    25      24.266  24.585  -7.565  1.00  1.00
ATOM    122  OH  TYR    25      23.498  24.566  -8.707  1.00  1.00
ATOM    123  N   TYR    26      27.279  21.672  -3.638  1.00  1.00
ATOM    124  CA  TYR    26      27.118  20.240  -3.866  1.00  1.00
ATOM    125  C   TYR    26      26.310  19.593  -2.749  1.00  1.00
ATOM    126  O   TYR    26      26.436  19.965  -1.582  1.00  1.00
ATOM    127  CB  TYR    26      28.484  19.554  -3.939  1.00  1.00
ATOM    128  CG  TYR    26      28.510  18.337  -4.836  1.00  1.00
ATOM    129  CD1 TYR    26      28.251  18.449  -6.196  1.00  1.00
ATOM    130  CD2 TYR    26      28.794  17.079  -4.319  1.00  1.00
ATOM    131  CE1 TYR    26      28.273  17.341  -7.023  1.00  1.00
ATOM    132  CE2 TYR    26      28.820  15.961  -5.130  1.00  1.00
ATOM    133  CZ  TYR    26      28.556  16.102  -6.493  1.00  1.00
ATOM    134  OH  TYR    26      28.579  14.998  -7.313  1.00  1.00
ATOM    135  N   LEU    27      25.478  18.623  -3.113  1.00  1.00
ATOM    136  CA  LEU    27      24.641  17.926  -2.145  1.00  1.00
ATOM    137  C   LEU    27      24.786  16.415  -2.279  1.00  1.00
ATOM    138  O   LEU    27      24.779  15.878  -3.386  1.00  1.00
ATOM    139  CB  LEU    27      23.167  18.300  -2.351  1.00  1.00
ATOM    140  CG  LEU    27      22.727  19.655  -1.794  1.00  1.00
ATOM    141  CD1 LEU    27      23.391  20.791  -2.555  1.00  1.00
ATOM    142  CD2 LEU    27      21.220  19.820  -1.911  1.00  1.00
ATOM    143  N   LYS    28      24.918  15.735  -1.145  1.00  1.00
ATOM    144  CA  LYS    28      25.005  14.280  -1.129  1.00  1.00
ATOM    145  C   LYS    28      24.092  13.684  -0.067  1.00  1.00
ATOM    146  O   LYS    28      23.947  14.236   1.022  1.00  1.00
ATOM    147  CB  LYS    28      26.441  13.833  -0.841  1.00  1.00
ATOM    148  CG  LYS    28      26.555  12.402  -0.340  1.00  1.00
ATOM    149  CD  LYS    28      26.055  11.411  -1.378  1.00  1.00
ATOM    150  CE  LYS    28      26.408   9.984  -0.994  1.00  1.00
ATOM    151  NZ  LYS    28      25.355   9.019  -1.413  1.00  1.00
ATOM    152  N   SER    29      23.474  12.553  -0.393  1.00  1.00
ATOM    153  CA  SER    29      22.798  11.726   0.575  1.00  1.00
ATOM    154  C   SER    29      23.704  10.614   1.007  1.00  1.00
ATOM    155  O   SER    29      24.309   9.927   0.155  1.00  1.00
ATOM    156  CB  SER    29      21.534  11.145  -0.028  1.00  1.00
ATOM    157  OG  SER    29      20.695  12.167  -0.537  1.00  1.00
ATOM    158  N   PHE    30      23.823  10.406   2.306  1.00  1.00
ATOM    159  CA  PHE    30      24.671   9.362   2.829  1.00  1.00
ATOM    160  C   PHE    30      23.851   8.393   3.662  1.00  1.00
ATOM    161  O   PHE    30      23.352   8.733   4.754  1.00  1.00
ATOM    162  CB  PHE    30      25.779   9.960   3.698  1.00  1.00
ATOM    163  CG  PHE    30      26.792  10.757   2.926  1.00  1.00
ATOM    164  CD1 PHE    30      26.629  12.118   2.741  1.00  1.00
ATOM    165  CD2 PHE    30      27.909  10.144   2.385  1.00  1.00
ATOM    166  CE1 PHE    30      27.560  12.851   2.031  1.00  1.00
ATOM    167  CE2 PHE    30      28.841  10.877   1.674  1.00  1.00
ATOM    168  CZ  PHE    30      28.670  12.225   1.497  1.00  1.00
ATOM    169  N   GLN    31      23.705   7.180   3.153  1.00  1.00
ATOM    170  CA  GLN    31      23.023   6.104   3.861  1.00  1.00
ATOM    171  C   GLN    31      23.997   5.466   4.848  1.00  1.00
ATOM    172  O   GLN    31      25.126   5.121   4.490  1.00  1.00
ATOM    173  CB  GLN    31      22.520   5.047   2.872  1.00  1.00
ATOM    174  CG  GLN    31      21.412   5.533   1.952  1.00  1.00
ATOM    175  CD  GLN    31      20.952   4.467   0.980  1.00  1.00
ATOM    176  OE1 GLN    31      21.454   3.342   0.992  1.00  1.00
ATOM    177  NE2 GLN    31      19.992   4.816   0.131  1.00  1.00
ATOM    178  N   VAL    32      23.545   5.316   6.092  1.00  1.00
ATOM    179  CA  VAL    32      24.357   4.808   7.175  1.00  1.00
ATOM    180  C   VAL    32      23.657   3.618   7.803  1.00  1.00
ATOM    181  O   VAL    32      22.436   3.585   7.840  1.00  1.00
ATOM    182  CB  VAL    32      24.595   5.881   8.254  1.00  1.00
ATOM    183  CG1 VAL    32      25.363   7.059   7.674  1.00  1.00
ATOM    184  CG2 VAL    32      23.270   6.393   8.798  1.00  1.00
ATOM    185  N   ASP    33      24.408   2.632   8.303  1.00  1.00
ATOM    186  CA  ASP    33      23.790   1.488   8.970  1.00  1.00
ATOM    187  C   ASP    33      23.026   1.894  10.221  1.00  1.00
ATOM    188  O   ASP    33      23.263   2.959  10.801  1.00  1.00
ATOM    189  CB  ASP    33      24.856   0.467   9.378  1.00  1.00
ATOM    190  CG  ASP    33      25.422  -0.289   8.192  1.00  1.00
ATOM    191  OD1 ASP    33      24.857  -0.168   7.085  1.00  1.00
ATOM    192  OD2 ASP    33      26.432  -1.004   8.370  1.00  1.00
ATOM    193  N   GLU    34      22.110   1.024  10.622  1.00  1.00
ATOM    194  CA  GLU    34      21.403   1.147  11.879  1.00  1.00
ATOM    195  C   GLU    34      22.350   1.619  12.987  1.00  1.00
ATOM    196  O   GLU    34      23.463   1.115  13.115  1.00  1.00
ATOM    197  CB  GLU    34      20.799  -0.199  12.286  1.00  1.00
ATOM    198  CG  GLU    34      20.012  -0.157  13.585  1.00  1.00
ATOM    199  CD  GLU    34      19.421  -1.504  13.952  1.00  1.00
ATOM    200  OE1 GLU    34      19.576  -2.457  13.159  1.00  1.00
ATOM    201  OE2 GLU    34      18.803  -1.608  15.033  1.00  1.00
ATOM    202  N   GLY    35      21.884   2.587  13.776  1.00  1.00
ATOM    203  CA  GLY    35      22.641   3.088  14.915  1.00  1.00
ATOM    204  C   GLY    35      23.563   4.244  14.574  1.00  1.00
ATOM    205  O   GLY    35      24.270   4.771  15.450  1.00  1.00
ATOM    206  N   ILE    36      23.574   4.655  13.314  1.00  1.00
ATOM    207  CA  ILE    36      24.475   5.718  12.907  1.00  1.00
ATOM    208  C   ILE    36      24.271   6.975  13.697  1.00  1.00
ATOM    209  O   ILE    36      23.139   7.357  14.033  1.00  1.00
ATOM    210  CB  ILE    36      24.292   6.076  11.421  1.00  1.00
ATOM    211  CG1 ILE    36      24.660   4.890  10.530  1.00  1.00
ATOM    212  CG2 ILE    36      25.184   7.258  11.036  1.00  1.00
ATOM    213  CD1 ILE    36      26.125   4.516  10.584  1.00  1.00
ATOM    214  N   THR    37      25.401   7.617  13.991  1.00  1.00
ATOM    215  CA  THR    37      25.440   8.873  14.713  1.00  1.00
ATOM    216  C   THR    37      25.945   9.995  13.810  1.00  1.00
ATOM    217  O   THR    37      26.491   9.756  12.721  1.00  1.00
ATOM    218  CB  THR    37      26.363   8.789  15.943  1.00  1.00
ATOM    219  OG1 THR    37      27.710   8.549  15.518  1.00  1.00
ATOM    220  CG2 THR    37      25.909   7.650  16.844  1.00  1.00
ATOM    221  N   VAL    38      25.776  11.240  14.240  1.00  1.00
ATOM    222  CA  VAL    38      26.313  12.382  13.498  1.00  1.00
ATOM    223  C   VAL    38      27.798  12.186  13.134  1.00  1.00
ATOM    224  O   VAL    38      28.216  12.467  11.988  1.00  1.00
ATOM    225  CB  VAL    38      26.202  13.686  14.310  1.00  1.00
ATOM    226  CG1 VAL    38      27.396  14.587  14.036  1.00  1.00
ATOM    227  CG2 VAL    38      24.935  14.440  13.936  1.00  1.00
ATOM    228  N   GLN    39      28.613  11.708  14.084  1.00  1.00
ATOM    229  CA  GLN    39      30.030  11.518  13.773  1.00  1.00
ATOM    230  C   GLN    39      30.251  10.513  12.611  1.00  1.00
ATOM    231  O   GLN    39      31.205  10.664  11.828  1.00  1.00
ATOM    232  CB  GLN    39      30.783  10.992  14.997  1.00  1.00
ATOM    233  CG  GLN    39      32.280  10.836  14.786  1.00  1.00
ATOM    234  CD  GLN    39      32.978  10.225  15.986  1.00  1.00
ATOM    235  OE1 GLN    39      32.460  10.265  17.103  1.00  1.00
ATOM    236  NE2 GLN    39      34.156   9.659  15.759  1.00  1.00
ATOM    237  N   THR    40      29.378   9.504  12.505  1.00  1.00
ATOM    238  CA  THR    40      29.483   8.508  11.444  1.00  1.00
ATOM    239  C   THR    40      29.474   9.166  10.071  1.00  1.00
ATOM    240  O   THR    40      30.011   8.618   9.108  1.00  1.00
ATOM    241  CB  THR    40      28.318   7.502  11.498  1.00  1.00
ATOM    242  OG1 THR    40      28.144   7.039  12.844  1.00  1.00
ATOM    243  CG2 THR    40      28.625   6.318  10.594  1.00  1.00
ATOM    244  N   ALA    41      28.863  10.342   9.986  1.00  1.00
ATOM    245  CA  ALA    41      28.846  11.111   8.748  1.00  1.00
ATOM    246  C   ALA    41      30.025  12.072   8.680  1.00  1.00
ATOM    247  O   ALA    41      30.575  12.320   7.608  1.00  1.00
ATOM    248  CB  ALA    41      27.559  11.915   8.640  1.00  1.00
ATOM    249  N   ILE    42      30.409  12.612   9.833  1.00  1.00
ATOM    250  CA  ILE    42      31.541  13.525   9.911  1.00  1.00
ATOM    251  C   ILE    42      32.854  12.801   9.647  1.00  1.00
ATOM    252  O   ILE    42      33.762  13.346   9.021  1.00  1.00
ATOM    253  CB  ILE    42      31.636  14.191  11.296  1.00  1.00
ATOM    254  CG1 ILE    42      30.401  15.049  11.570  1.00  1.00
ATOM    255  CG2 ILE    42      32.871  15.090  11.381  1.00  1.00
ATOM    256  CD1 ILE    42      30.198  16.165  10.567  1.00  1.00
ATOM    257  N   THR    43      32.948  11.565  10.131  1.00  1.00
ATOM    258  CA  THR    43      34.161  10.772   9.970  1.00  1.00
ATOM    259  C   THR    43      34.502  10.575   8.497  1.00  1.00
ATOM    260  O   THR    43      33.614  10.374   7.667  1.00  1.00
ATOM    261  CB  THR    43      34.013   9.378  10.612  1.00  1.00
ATOM    262  OG1 THR    43      35.257   8.673  10.519  1.00  1.00
ATOM    263  CG2 THR    43      32.932   8.594   9.887  1.00  1.00
ATOM    264  N   GLN    44      35.790  10.636   8.181  1.00  1.00
ATOM    265  CA  GLN    44      36.254  10.409   6.818  1.00  1.00
ATOM    266  C   GLN    44      36.251   8.925   6.475  1.00  1.00
ATOM    267  O   GLN    44      36.554   8.539   5.347  1.00  1.00
ATOM    268  CB  GLN    44      37.678  10.946   6.640  1.00  1.00
ATOM    269  CG  GLN    44      38.732  10.180   7.424  1.00  1.00
ATOM    270  CD  GLN    44      38.941  10.737   8.817  1.00  1.00
ATOM    271  OE1 GLN    44      37.987  11.113   9.496  1.00  1.00
ATOM    272  NE2 GLN    44      40.197  10.793   9.249  1.00  1.00
ATOM    273  N   SER    45      35.905   8.097   7.454  1.00  1.00
ATOM    274  CA  SER    45      35.762   6.663   7.230  1.00  1.00
ATOM    275  C   SER    45      34.319   6.297   6.911  1.00  1.00
ATOM    276  O   SER    45      34.006   5.137   6.638  1.00  1.00
ATOM    277  CB  SER    45      36.198   5.896   8.463  1.00  1.00
ATOM    278  OG  SER    45      35.344   6.166   9.560  1.00  1.00
ATOM    279  N   GLY    46      33.056   7.460   6.912  1.00  1.00
ATOM    280  CA  GLY    46      31.702   6.964   6.702  1.00  1.00
ATOM    281  C   GLY    46      31.017   7.698   5.556  1.00  1.00
ATOM    282  O   GLY    46      30.608   7.084   4.568  1.00  1.00
ATOM    283  N   ILE    47      30.894   9.014   5.693  1.00  1.00
ATOM    284  CA  ILE    47      30.292   9.838   4.652  1.00  1.00
ATOM    285  C   ILE    47      31.310  10.799   4.053  1.00  1.00
ATOM    286  O   ILE    47      31.276  11.090   2.856  1.00  1.00
ATOM    287  CB  ILE    47      29.118  10.672   5.196  1.00  1.00
ATOM    288  CG1 ILE    47      27.929   9.772   5.537  1.00  1.00
ATOM    289  CG2 ILE    47      28.658  11.700   4.162  1.00  1.00
ATOM    290  CD1 ILE    47      26.719  10.525   6.043  1.00  1.00
ATOM    291  N   LEU    48      32.217  11.291   4.890  1.00  1.00
ATOM    292  CA  LEU    48      33.285  12.173   4.430  1.00  1.00
ATOM    293  C   LEU    48      34.189  11.468   3.430  1.00  1.00
ATOM    294  O   LEU    48      34.922  12.111   2.678  1.00  1.00
ATOM    295  CB  LEU    48      34.136  12.638   5.619  1.00  1.00
ATOM    296  CG  LEU    48      35.363  13.487   5.283  1.00  1.00
ATOM    297  CD1 LEU    48      36.347  13.494   6.443  1.00  1.00
ATOM    298  CD2 LEU    48      36.078  12.938   4.057  1.00  1.00
ATOM    299  N   SER    49      34.134  10.139   3.423  1.00  1.00
ATOM    300  CA  SER    49      34.947   9.344   2.509  1.00  1.00
ATOM    301  C   SER    49      34.458   9.484   1.074  1.00  1.00
ATOM    302  O   SER    49      35.131   9.064   0.133  1.00  1.00
ATOM    303  CB  SER    49      34.891   7.881   2.900  1.00  1.00
ATOM    304  OG  SER    49      33.668   7.290   2.498  1.00  1.00
ATOM    305  N   GLN    50      33.281  10.080   0.910  1.00  1.00
ATOM    306  CA  GLN    50      32.731  10.307  -0.415  1.00  1.00
ATOM    307  C   GLN    50      33.408  11.465  -1.133  1.00  1.00
ATOM    308  O   GLN    50      33.551  11.464  -2.353  1.00  1.00
ATOM    309  CB  GLN    50      31.234  10.615  -0.327  1.00  1.00
ATOM    310  CG  GLN    50      30.346   9.382  -0.301  1.00  1.00
ATOM    311  CD  GLN    50      30.555   8.488  -1.507  1.00  1.00
ATOM    312  OE1 GLN    50      30.683   8.969  -2.634  1.00  1.00
ATOM    313  NE2 GLN    50      30.591   7.181  -1.275  1.00  1.00
ATOM    314  N   PHE    51      33.820  12.454  -0.353  1.00  1.00
ATOM    315  CA  PHE    51      34.306  13.713  -0.898  1.00  1.00
ATOM    316  C   PHE    51      35.579  14.091  -0.188  1.00  1.00
ATOM    317  O   PHE    51      35.549  14.784   0.859  1.00  1.00
ATOM    318  CB  PHE    51      33.262  14.816  -0.711  1.00  1.00
ATOM    319  CG  PHE    51      32.055  14.665  -1.594  1.00  1.00
ATOM    320  CD1 PHE    51      31.078  13.729  -1.300  1.00  1.00
ATOM    321  CD2 PHE    51      31.898  15.458  -2.717  1.00  1.00
ATOM    322  CE1 PHE    51      29.968  13.590  -2.112  1.00  1.00
ATOM    323  CE2 PHE    51      30.788  15.319  -3.529  1.00  1.00
ATOM    324  CZ  PHE    51      29.826  14.390  -3.230  1.00  1.00
ATOM    325  N   PRO    52      36.702  13.643  -0.748  1.00  1.00
ATOM    326  CA  PRO    52      37.987  13.730  -0.063  1.00  1.00
ATOM    327  C   PRO    52      38.385  15.181   0.177  1.00  1.00
ATOM    328  O   PRO    52      39.253  15.468   1.001  1.00  1.00
ATOM    329  CB  PRO    52      38.967  13.017  -1.010  1.00  1.00
ATOM    330  CG  PRO    52      38.336  13.134  -2.357  1.00  1.00
ATOM    331  CD  PRO    52      36.853  13.030  -2.134  1.00  1.00
ATOM    332  N   GLU    53      37.747  16.092  -0.548  1.00  1.00
ATOM    333  CA  GLU    53      38.049  17.513  -0.432  1.00  1.00
ATOM    334  C   GLU    53      37.239  18.160   0.684  1.00  1.00
ATOM    335  O   GLU    53      37.396  19.347   0.971  1.00  1.00
ATOM    336  CB  GLU    53      37.734  18.238  -1.743  1.00  1.00
ATOM    337  CG  GLU    53      38.699  17.921  -2.874  1.00  1.00
ATOM    338  CD  GLU    53      38.034  17.963  -4.236  1.00  1.00
ATOM    339  OE1 GLU    53      36.794  17.828  -4.296  1.00  1.00
ATOM    340  OE2 GLU    53      38.754  18.129  -5.243  1.00  1.00
ATOM    341  N   ILE    54      36.372  17.373   1.313  1.00  1.00
ATOM    342  CA  ILE    54      35.505  17.878   2.370  1.00  1.00
ATOM    343  C   ILE    54      36.251  17.978   3.694  1.00  1.00
ATOM    344  O   ILE    54      36.953  17.049   4.093  1.00  1.00
ATOM    345  CB  ILE    54      34.282  16.968   2.580  1.00  1.00
ATOM    346  CG1 ILE    54      33.828  16.357   1.254  1.00  1.00
ATOM    347  CG2 ILE    54      33.113  17.760   3.168  1.00  1.00
ATOM    348  CD1 ILE    54      33.546  17.381   0.176  1.00  1.00
ATOM    349  N   ASP    55      36.095  19.111   4.370  1.00  1.00
ATOM    350  CA  ASP    55      36.553  19.248   5.749  1.00  1.00
ATOM    351  C   ASP    55      35.399  19.593   6.680  1.00  1.00
ATOM    352  O   ASP    55      35.079  20.764   6.881  1.00  1.00
ATOM    353  CB  ASP    55      37.609  20.351   5.854  1.00  1.00
ATOM    354  CG  ASP    55      38.327  20.346   7.189  1.00  1.00
ATOM    355  OD1 ASP    55      38.072  19.427   7.997  1.00  1.00
ATOM    356  OD2 ASP    55      39.143  21.261   7.429  1.00  1.00
ATOM    357  N   LEU    56      34.776  18.566   7.247  1.00  1.00
ATOM    358  CA  LEU    56      33.553  18.742   8.022  1.00  1.00
ATOM    359  C   LEU    56      33.855  19.289   9.411  1.00  1.00
ATOM    360  O   LEU    56      33.001  19.914  10.041  1.00  1.00
ATOM    361  CB  LEU    56      32.821  17.402   8.169  1.00  1.00
ATOM    362  CG  LEU    56      32.890  16.457   6.968  1.00  1.00
ATOM    363  CD1 LEU    56      31.866  15.339   7.103  1.00  1.00
ATOM    364  CD2 LEU    56      32.607  17.207   5.675  1.00  1.00
TER
David Burke PhD
University of Cambridge
Department of Biochemistry
80 Tennis Court Road
Cambridge CB2 1GA, UK
Tel: 01223 766031
Group Fax: 01223 766082 
Dept Fax: 01223 766002 
Email:dave@cryst.bioc.cam.ac.uk
WWW: http://www-cryst.bioc.cam.ac.uk/~dave/
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