
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  154 (  154),  selected  154 , name T0370TS168_4
# Molecule2: number of CA atoms  154 ( 1177),  selected  154 , name T0370.pdb
# PARAMETERS: T0370TS168_4.T0370.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    29        58 - 86          4.86    21.35
  LONGEST_CONTINUOUS_SEGMENT:    29        59 - 87          4.89    21.57
  LCS_AVERAGE:     13.48

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15         7 - 21          1.84    20.38
  LONGEST_CONTINUOUS_SEGMENT:    15         8 - 22          1.77    19.88
  LCS_AVERAGE:      4.92

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    14         8 - 21          0.35    19.62
  LCS_AVERAGE:      3.28

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  154
LCS_GDT     M       1     M       1      3    7   19     0    3    6    8    9   12   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     T       2     T       2      4    7   20     3    4    6    8    9   12   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     T       3     T       3      4    7   20     3    4    4    6    7   10   14   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     P       4     P       4      4    7   21     3    4    6    8    9   11   15   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     P       5     P       5      4    7   22     3    4    6    8    9    9   10   12   15   18   22   29   37   45   47   55   58   61   64   67 
LCS_GDT     A       6     A       6      4    7   22     3    4    6    8    9    9   11   13   15   18   22   24   29   32   40   55   58   61   64   67 
LCS_GDT     R       7     R       7      4   15   24     0    3    5    8    9   10   12   15   16   23   27   33   40   45   47   55   58   61   64   67 
LCS_GDT     T       8     T       8     14   15   24     8   14   14   15   15   16   16   17   22   26   30   34   35   40   42   46   52   56   59   64 
LCS_GDT     A       9     A       9     14   15   24    13   14   14   15   15   16   16   17   20   26   30   34   35   40   44   48   53   56   59   64 
LCS_GDT     K      10     K      10     14   15   24    13   14   14   15   15   16   16   17   20   24   30   33   37   40   44   48   53   56   59   66 
LCS_GDT     Q      11     Q      11     14   15   24    13   14   14   15   15   16   16   18   22   26   30   34   39   45   47   55   58   61   64   67 
LCS_GDT     R      12     R      12     14   15   24    13   14   14   15   15   16   16   19   22   29   32   34   37   40   44   55   58   61   64   67 
LCS_GDT     I      13     I      13     14   15   24    13   14   14   15   15   16   16   17   22   29   32   34   37   40   44   55   58   61   64   67 
LCS_GDT     Q      14     Q      14     14   15   24    13   14   14   15   15   16   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     D      15     D      15     14   15   24    13   14   14   15   15   16   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     T      16     T      16     14   15   24    13   14   14   15   15   16   18   19   22   29   32   34   39   45   47   55   58   61   64   67 
LCS_GDT     L      17     L      17     14   15   24    13   14   14   15   15   16   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     N      18     N      18     14   15   24    13   14   14   15   15   16   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     R      19     R      19     14   15   24    13   14   14   15   15   16   18   19   22   29   32   34   38   43   47   55   58   61   64   67 
LCS_GDT     L      20     L      20     14   15   24    13   14   14   15   15   16   18   19   22   29   32   34   40   45   47   55   58   61   64   67 
LCS_GDT     E      21     E      21     14   15   24    13   14   14   15   15   16   18   19   22   29   32   34   40   45   47   55   58   61   64   67 
LCS_GDT     L      22     L      22      3   15   24     3    4    4    5    7   11   15   18   22   29   32   34   38   43   46   48   53   55   58   62 
LCS_GDT     D      23     D      23      4    4   24     3    4    4    5    6    9   11   18   22   22   25   30   34   40   46   48   53   55   58   60 
LCS_GDT     V      24     V      24      4    4   24     3    4    5    8    9   13   15   18   22   22   30   33   35   39   43   48   53   55   58   60 
LCS_GDT     D      25     D      25      4    4   24     3    4    5    8    9   13   14   15   21   22   25   30   34   43   46   48   53   55   58   60 
LCS_GDT     A      26     A      26      4    4   24     3    3    6    7    7    8   11   14   17   19   22   27   30   33   37   41   48   55   58   60 
LCS_GDT     W      27     W      27      3    3   24     3    4    6    7    7    8   10   14   17   19   22   27   30   32   35   39   43   47   50   59 
LCS_GDT     V      28     V      28      3    5   24     3    4    6    7    7    8   10   14   17   19   22   27   30   32   35   39   47   53   57   62 
LCS_GDT     S      29     S      29      3    5   24     3    4    4    5    7    8   11   14   17   19   22   24   30   32   37   43   47   53   57   63 
LCS_GDT     T      30     T      30      3    5   24     3    3    3    4    9    9   11   13   17   17   19   22   25   31   37   43   47   53   57   63 
LCS_GDT     A      31     A      31      4    5   20     3    3    4    4    5    6   11   12   14   14   19   21   24   30   37   43   47   53   57   60 
LCS_GDT     G      32     G      32      4    5   20     3    3    4    7    9   10   10   12   14   17   19   21   25   32   37   43   47   53   57   63 
LCS_GDT     A      33     A      33      4    7   20     3    3    4    6    8    8   11   12   14   17   19   21   25   32   37   43   47   53   57   63 
LCS_GDT     D      34     D      34      4    7   20     3    3    5    6    8   10   11   12   14   17   19   21   25   32   37   43   47   53   57   63 
LCS_GDT     G      35     G      35      4    7   20     3    4    5    6    8    8   11   12   14   17   19   21   25   32   37   43   47   53   57   63 
LCS_GDT     G      36     G      36      4    7   20     3    4    5    5    7    8   11   12   14   17   18   21   25   29   32   35   40   51   57   63 
LCS_GDT     A      37     A      37      4    7   20     3    4    5    6    7    8   11   12   14   17   19   21   23   29   32   37   46   53   57   62 
LCS_GDT     P      38     P      38      4    7   20     0    4    5    6    7    8   11   12   14   17   19   21   23   31   37   43   47   53   57   62 
LCS_GDT     Y      39     Y      39      3    7   20     3    3    5    6    7    8   11   12   14   17   19   21   24   29   37   43   47   53   57   62 
LCS_GDT     L      40     L      40      5    7   20     3    4    5    6    9   13   14   15   19   20   22   27   30   34   40   44   48   59   64   67 
LCS_GDT     V      41     V      41      5    7   20     3    3    5    6    8    8   11   12   15   20   22   27   35   44   47   55   58   61   64   67 
LCS_GDT     P      42     P      42      5    7   20     3    4    5    6    8   10   13   15   17   22   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     L      43     L      43      5    7   20     3    4    5    9   10   13   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     S      44     S      44      5    7   20     3    4    5    6    8    8   17   19   21   26   31   36   40   44   47   55   58   61   64   67 
LCS_GDT     Y      45     Y      45      4    8   20     1    3    4    6    9   13   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     L      46     L      46      4    8   20     0    3    4    7    9   11   14   16   21   23   26   31   35   40   44   49   58   61   64   67 
LCS_GDT     W      47     W      47      4    8   20     1    3    5    7    9   10   14   16   21   22   26   30   38   43   46   48   52   55   61   66 
LCS_GDT     D      48     D      48      4    8   20     3    4    5    7    9   10   12   13   17   20   26   30   38   43   46   48   52   55   58   60 
LCS_GDT     G      49     G      49      4    8   20     3    4    5    7    9   11   12   13   17   22   26   29   38   43   46   48   53   55   58   60 
LCS_GDT     E      50     E      50      4    8   20     3    4    5    7    9   10   14   18   22   29   32   34   38   43   46   48   53   55   58   63 
LCS_GDT     T      51     T      51      5    9   20     3    4    6    7   12   14   18   19   22   29   32   34   38   43   46   48   53   56   59   66 
LCS_GDT     F      52     F      52      5    9   20     3    4    6    7   12   14   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     L      53     L      53      5    9   20     3    4    6    7   12   14   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     V      54     V      54      5    9   20     3    4    6    9   12   14   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     A      55     A      55      5    9   20     3    4    6    9   12   14   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     T      56     T      56      4    9   20     3    4    6    9   10   13   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     P      57     P      57      4    9   20     3    4    6    7   12   12   17   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     A      58     A      58      4    9   29     3    4    5    9   10   14   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     A      59     A      59      4    9   29     3    4    5    7   12   14   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     S      60     S      60      4    6   29     3    4    5    7    9   12   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     P      61     P      61      4    6   29     3    4    5    5    7   10   12   16   21   23   27   32   39   45   47   55   58   61   64   67 
LCS_GDT     T      62     T      62      3    6   29     3    4    5    5    5    6    7   10   11   12   15   16   21   30   36   40   44   51   58   63 
LCS_GDT     G      63     G      63      3    6   29     0    3    5    5    5    6    9   13   14   20   22   26   28   30   35   39   46   53   58   64 
LCS_GDT     R      64     R      64      3    6   29     1    3    3    6    9   12   16   18   22   27   32   34   38   43   46   48   53   56   59   64 
LCS_GDT     N      65     N      65      3    5   29     3    3    3    5    9   12   18   19   22   29   32   34   38   43   46   48   53   56   59   64 
LCS_GDT     L      66     L      66      3    4   29     3    3    4    5    9   14   18   19   22   29   32   34   38   43   46   48   53   56   59   64 
LCS_GDT     S      67     S      67      3    5   29     3    3    5    5    7   10   14   17   21   24   27   31   38   43   46   48   53   55   58   60 
LCS_GDT     E      68     E      68      3    7   29     3    3    5    7   12   14   18   19   22   29   32   34   38   43   46   48   53   55   58   63 
LCS_GDT     T      69     T      69      6    7   29     3    4    6    8    9   11   14   16   22   29   32   34   37   40   44   48   53   56   59   64 
LCS_GDT     G      70     G      70      6    7   29     3    4    6    6    9   11   16   16   19   29   32   34   37   40   44   48   53   56   59   64 
LCS_GDT     R      71     R      71      6    8   29     3    4    6    7    9   13   16   18   21   29   32   34   38   43   46   48   53   55   58   64 
LCS_GDT     V      72     V      72      6    8   29     3    4    6    7   13   16   16   18   22   27   32   34   38   43   46   48   53   56   59   64 
LCS_GDT     R      73     R      73      6    8   29     3    4    6    7    9   13   16   18   22   24   27   31   38   43   46   48   53   55   58   60 
LCS_GDT     L      74     L      74      6    8   29     3    4    6    7    9   13   16   18   22   24   27   31   38   43   46   48   53   55   58   62 
LCS_GDT     G      75     G      75      4    8   29     4    4    5    7    9   13   16   18   21   24   27   31   38   43   46   48   53   55   58   62 
LCS_GDT     I      76     I      76      4    8   29     4    4    5    6    9   13   16   18   21   24   27   31   38   43   46   48   53   55   58   60 
LCS_GDT     G      77     G      77      4    8   29     4    4    5    7    9   13   16   18   21   24   27   31   36   43   46   48   52   55   58   60 
LCS_GDT     P      78     P      78      4    8   29     4    4    5    6    9   12   16   18   21   24   27   31   38   43   46   48   53   55   58   60 
LCS_GDT     T      79     T      79      4    6   29     3    4    4    6    9   12   16   18   21   24   27   31   38   43   46   48   53   55   58   60 
LCS_GDT     R      80     R      80      4    6   29     3    4    4    6    6    9   11   14   17   21   25   29   38   43   46   48   52   55   58   60 
LCS_GDT     D      81     D      81      4    6   29     1    3    4    6    6    8   11   14   17   22   24   29   38   43   46   48   53   55   58   60 
LCS_GDT     L      82     L      82      4    5   29     1    4    5    7    9   11   14   16   19   22   25   30   38   43   46   48   53   55   58   60 
LCS_GDT     V      83     V      83      4    5   29     3    4    5    7    9   11   14   18   21   24   26   31   38   43   46   48   53   55   58   62 
LCS_GDT     L      84     L      84      4    5   29     3    4    5    7    9   11   15   18   22   24   26   31   38   43   46   48   53   55   58   60 
LCS_GDT     V      85     V      85      4    5   29     3    4    5   12   13   16   16   18   22   24   32   34   38   43   46   48   53   55   59   64 
LCS_GDT     E      86     E      86      3    5   29     3    3    4   15   15   16   16   18   22   24   27   31   38   43   46   48   53   55   58   60 
LCS_GDT     G      87     G      87      3    4   29     3    4    5   15   15   15   15   16   19   20   27   31   38   43   46   48   52   55   58   60 
LCS_GDT     T      88     T      88      3    4   26     3    4    5    7    9   13   14   15   19   20   25   29   34   43   46   48   52   55   58   60 
LCS_GDT     A      89     A      89      3    5   18     3    3    5    5    9   13   14   15   19   20   22   26   29   34   40   44   49   55   57   60 
LCS_GDT     L      90     L      90      4    7   18     3    4    6    6    8   10   14   15   19   20   22   27   32   34   40   46   49   55   58   60 
LCS_GDT     P      91     P      91      4    7   18     3    4    4    5    8   10   12   15   16   18   20   22   28   33   37   38   42   47   49   54 
LCS_GDT     L      92     L      92      5    7   18     3    4    5    6    8   11   13   15   17   18   22   25   28   33   37   37   39   43   48   50 
LCS_GDT     E      93     E      93      5    7   18     3    4    5    6    8   11   13   15   17   18   22   25   28   33   37   37   38   42   46   49 
LCS_GDT     P      94     P      94      5    7   18     3    4    5    6    8   11   13   15   17   18   22   25   28   33   37   37   39   42   46   49 
LCS_GDT     A      95     A      95      5    7   18     3    4    5    6    8   11   13   15   17   18   22   25   28   33   37   37   39   42   46   49 
LCS_GDT     G      96     G      96      5    7   18     3    3    5    8    9   11   13   15   17   18   22   25   28   33   37   37   39   42   46   49 
LCS_GDT     L      97     L      97      3    7   18     4    4    5    8    9   11   13   15   17   18   22   25   28   33   37   37   39   44   46   52 
LCS_GDT     P      98     P      98      5    7   18     3    5    6    6    6    9   12   15   17   18   22   25   28   33   37   37   40   48   52   57 
LCS_GDT     D      99     D      99      5    7   18     4    5    6    8    9   11   13   15   17   18   22   25   28   33   37   43   47   53   56   63 
LCS_GDT     G     100     G     100      5    7   18     4    5    6    8    9   11   13   15   17   18   22   25   28   33   39   43   55   59   64   67 
LCS_GDT     V     101     V     101      5    7   18     4    5    6    8    9   10   13   15   17   18   22   25   28   33   39   47   55   61   64   67 
LCS_GDT     G     102     G     102      5    7   18     4    5    6    6    9    9   10   11   16   18   22   25   28   32   37   38   44   51   56   63 
LCS_GDT     D     103     D     103      4    5   18     3    3    4    6    8   11   13   15   17   20   22   25   28   33   37   38   42   45   50   57 
LCS_GDT     T     104     T     104      4    5   18     3    3    4    4    5   10   13   15   18   21   26   29   34   37   42   46   55   61   64   67 
LCS_GDT     F     105     F     105      4    5   18     0    3    5    5   10   13   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     A     106     A     106      3    5   18     2    4    5    9   10   13   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     E     107     E     107      3    4   17     3    3    5    5    7    8   16   17   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     K     108     K     108      5    6   17     3    4    4    5    8    8   11   13   15   18   19   26   29   32   43   55   58   61   64   67 
LCS_GDT     T     109     T     109      5    6   17     3    4    4    5    8    8   11   13   15   18   21   27   29   35   42   55   58   61   64   67 
LCS_GDT     G     110     G     110      5    7   16     3    4    4    5    8    8   11   13   15   18   22   27   31   33   46   55   58   61   64   67 
LCS_GDT     F     111     F     111      5    7   16     3    4    4    5    8    8   11   13   15   18   22   27   29   32   43   55   58   61   64   67 
LCS_GDT     D     112     D     112      5    7   16     3    3    4    5    8    8   11   13   15   18   22   30   37   45   47   55   58   61   64   67 
LCS_GDT     P     113     P     113      4    7   16     3    4    4    5    8    9   11   13   15   23   28   33   40   45   47   55   58   61   64   67 
LCS_GDT     R     114     R     114      4    7   16     3    4    4    5    8    9   13   17   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     R     115     R     115      4    7   16     3    4    4    5    7    8   10   14   20   26   29   33   40   45   47   55   58   61   64   67 
LCS_GDT     L     116     L     116      4    7   16     3    4    4    6    7    8   10   16   22   26   30   36   40   45   47   55   58   61   64   67 
LCS_GDT     T     117     T     117      4    8   16     3    3    5    7    9   12   17   19   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     T     118     T     118      5    8   16     3    4    5    6    7   10   14   16   21   22   26   29   29   33   41   47   58   61   64   67 
LCS_GDT     S     119     S     119      5    8   16     3    4    5    6    7    8   13   15   18   21   25   26   28   32   36   42   47   53   62   67 
LCS_GDT     Y     120     Y     120      5    8   16     3    4    5    6    8   10   14   16   21   23   26   36   40   45   47   55   58   61   64   67 
LCS_GDT     L     121     L     121      5    8   16     3    4    5    6    8    9   14   16   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     Y     122     Y     122      5    8   16     1    3    5    6    8   10   18   19   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     F     123     F     123      4    8   14     4    4    5    6    8   11   15   18   22   29   32   36   40   45   47   55   58   61   64   67 
LCS_GDT     R     124     R     124      4    8   14     4    4    5    6    8   12   16   17   22   29   32   34   37   40   44   48   53   56   61   66 
LCS_GDT     I     125     I     125      4    8   14     4    4    5    6    9   12   16   17   19   24   30   33   37   40   44   48   53   56   61   66 
LCS_GDT     S     126     S     126      4    8   14     4    4    5    6    7    9   10   13   16   20   22   25   28   35   41   44   50   52   56   59 
LCS_GDT     P     127     P     127      3    8   14     3    4    5    6    8    9   10   12   15   17   22   23   27   30   36   40   49   51   52   58 
LCS_GDT     R     128     R     128      3    8   14     3    4    5    5    7    9   10   11   14   17   22   32   34   36   41   45   50   53   59   64 
LCS_GDT     R     129     R     129      3    4   13     3    4    5    5    5   11   12   15   16   18   22   24   29   36   39   41   50   56   59   64 
LCS_GDT     V     130     V     130      3    4   13     0    3    5    7    8   11   12   15   15   18   20   22   24   27   33   38   42   51   58   63 
LCS_GDT     Q     131     Q     131      3    3   13     0    3    3    5    8   11   12   15   15   16   18   21   24   27   30   37   45   51   58   63 
LCS_GDT     A     132     A     132      3    3   13     0    3    3    3    3    4    6    7    8   11   13   21   22   29   33   38   47   59   64   67 
LCS_GDT     W     133     W     133      3    4   14     0    3    4    4    4    6    6    7    8   10   16   16   20   23   26   31   39   48   58   63 
LCS_GDT     R     134     R     134      3    8   14     1    3    3    5    5    6    9   10   10   12   16   16   18   19   26   33   39   43   50   61 
LCS_GDT     E     135     E     135      6    9   14     4    5    7    8    9    9    9   10   11   12   16   18   20   23   27   37   42   48   55   63 
LCS_GDT     A     136     A     136      6    9   14     4    5    7    8    9    9    9   10   10   10   12   13   20   23   26   30   36   39   52   55 
LCS_GDT     N     137     N     137      6    9   14     4    5    7    8    9    9    9   10   10   10   11   13   18   19   24   25   31   38   40   46 
LCS_GDT     E     138     E     138      6    9   16     4    5    7    8    9    9    9   10   12   14   18   21   24   27   30   37   39   50   58   63 
LCS_GDT     L     139     L     139      6    9   16     4    5    7    8    9    9    9   10   11   12   16   21   25   30   37   43   52   61   64   67 
LCS_GDT     S     140     S     140      6    9   16     4    5    7    8    9    9    9   10   11   11   15   18   20   23   29   34   38   45   53   62 
LCS_GDT     G     141     G     141      5    9   16     3    5    5    8    9   10   12   14   15   16   17   20   23   29   32   37   45   52   60   66 
LCS_GDT     R     142     R     142      5    9   16     4    5    7    8    9    9   12   14   20   22   25   29   33   37   43   51   58   61   64   67 
LCS_GDT     E     143     E     143      3    9   16     3    4    5    9   10   13   16   18   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     L     144     L     144      3    7   16     3    3    4    5    6    7    9   18   20   22   25   29   33   41   45   51   58   61   64   67 
LCS_GDT     M     145     M     145      4    5   16     3    4    5    9   10   13   16   18   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     R     146     R     146      4    5   16     3    3    4    5    6   13   16   18   20   26   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     D     147     D     147      4    6   16     3    3    5    9   10   13   16   18   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     G     148     G     148      4    6   16     3    3    4    5    7   13   16   18   21   27   31   36   40   45   47   55   58   61   64   67 
LCS_GDT     E     149     E     149      4    6   16     3    3    4    5    6    7    7   12   14   17   21   24   26   37   39   49   58   61   64   67 
LCS_GDT     W     150     W     150      4    6   16     3    3    4    5    7    8   10   14   15   16   18   20   22   28   30   37   45   51   58   63 
LCS_GDT     L     151     L     151      4    6   16     3    3    4    4    6    7    7    8   15   16   17   19   21   28   30   35   39   44   56   61 
LCS_GDT     V     152     V     152      3    6   16     3    3    4    5    6    7    7    8   10   11   16   17   19   21   23   26   28   31   32   44 
LCS_GDT     T     153     T     153      3    6   16     0    3    4    4    5    7    9   11   14   15   16   17   19   21   22   24   28   31   32   36 
LCS_GDT     D     154     D     154      3    6   15     0    3    3    8    9    9    9   10   14   15   16   17   19   21   22   24   26   31   32   36 
LCS_AVERAGE  LCS_A:   7.23  (   3.28    4.92   13.48 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     13     14     14     15     15     16     18     19     22     29     32     36     40     45     47     55     58     61     64     67 
GDT PERCENT_CA   8.44   9.09   9.09   9.74   9.74  10.39  11.69  12.34  14.29  18.83  20.78  23.38  25.97  29.22  30.52  35.71  37.66  39.61  41.56  43.51
GDT RMS_LOCAL    0.23   0.35   0.35   0.67   0.67   1.01   2.51   2.63   2.94   3.53   3.75   4.41   4.71   5.15   5.24   5.78   6.00   6.24   6.50   6.76
GDT RMS_ALL_CA  19.59  19.62  19.62  19.63  19.63  19.28  19.58  19.45  19.30  19.39  19.47  15.31  15.31  15.09  15.11  14.99  14.97  14.89  14.80  14.73

#      Molecule1      Molecule2       DISTANCE
LGA    M       1      M       1         36.911
LGA    T       2      T       2         33.753
LGA    T       3      T       3         27.489
LGA    P       4      P       4         25.075
LGA    P       5      P       5         23.285
LGA    A       6      A       6         18.017
LGA    R       7      R       7         13.550
LGA    T       8      T       8          7.432
LGA    A       9      A       9          6.602
LGA    K      10      K      10          7.093
LGA    Q      11      Q      11          5.727
LGA    R      12      R      12          4.118
LGA    I      13      I      13          4.378
LGA    Q      14      Q      14          3.593
LGA    D      15      D      15          2.233
LGA    T      16      T      16          1.890
LGA    L      17      L      17          2.209
LGA    N      18      N      18          0.426
LGA    R      19      R      19          1.573
LGA    L      20      L      20          3.132
LGA    E      21      E      21          2.935
LGA    L      22      L      22          5.615
LGA    D      23      D      23         10.824
LGA    V      24      V      24          9.138
LGA    D      25      D      25         11.720
LGA    A      26      A      26         16.335
LGA    W      27      W      27         19.259
LGA    V      28      V      28         16.309
LGA    S      29      S      29         20.337
LGA    T      30      T      30         24.749
LGA    A      31      A      31         31.616
LGA    G      32      G      32         33.247
LGA    A      33      A      33         31.847
LGA    D      34      D      34         37.081
LGA    G      35      G      35         37.015
LGA    G      36      G      36         34.182
LGA    A      37      A      37         29.405
LGA    P      38      P      38         26.218
LGA    Y      39      Y      39         20.757
LGA    L      40      L      40         17.527
LGA    V      41      V      41         14.257
LGA    P      42      P      42         15.845
LGA    L      43      L      43         11.348
LGA    S      44      S      44         13.071
LGA    Y      45      Y      45          7.793
LGA    L      46      L      46          9.504
LGA    W      47      W      47          9.372
LGA    D      48      D      48         13.774
LGA    G      49      G      49         11.873
LGA    E      50      E      50          5.352
LGA    T      51      T      51          3.169
LGA    F      52      F      52          2.418
LGA    L      53      L      53          2.760
LGA    V      54      V      54          2.858
LGA    A      55      A      55          2.751
LGA    T      56      T      56          5.165
LGA    P      57      P      57          4.291
LGA    A      58      A      58          1.286
LGA    A      59      A      59          2.162
LGA    S      60      S      60          8.137
LGA    P      61      P      61         12.224
LGA    T      62      T      62         12.983
LGA    G      63      G      63          9.973
LGA    R      64      R      64          4.745
LGA    N      65      N      65          3.086
LGA    L      66      L      66          3.227
LGA    S      67      S      67          6.885
LGA    E      68      E      68          3.457
LGA    T      69      T      69          4.697
LGA    G      70      G      70          5.062
LGA    R      71      R      71          5.681
LGA    V      72      V      72          6.862
LGA    R      73      R      73         10.626
LGA    L      74      L      74         10.026
LGA    G      75      G      75         12.957
LGA    I      76      I      76         14.831
LGA    G      77      G      77         17.096
LGA    P      78      P      78         17.411
LGA    T      79      T      79         18.041
LGA    R      80      R      80         18.433
LGA    D      81      D      81         15.358
LGA    L      82      L      82         14.137
LGA    V      83      V      83         10.559
LGA    L      84      L      84          9.467
LGA    V      85      V      85          6.441
LGA    E      86      E      86         10.487
LGA    G      87      G      87         12.737
LGA    T      88      T      88         13.781
LGA    A      89      A      89         13.868
LGA    L      90      L      90         16.302
LGA    P      91      P      91         22.068
LGA    L      92      L      92         25.484
LGA    E      93      E      93         31.693
LGA    P      94      P      94         33.434
LGA    A      95      A      95         37.057
LGA    G      96      G      96         32.692
LGA    L      97      L      97         29.251
LGA    P      98      P      98         33.826
LGA    D      99      D      99         35.128
LGA    G     100      G     100         30.110
LGA    V     101      V     101         23.993
LGA    G     102      G     102         23.667
LGA    D     103      D     103         25.610
LGA    T     104      T     104         20.171
LGA    F     105      F     105         15.022
LGA    A     106      A     106         15.819
LGA    E     107      E     107         18.266
LGA    K     108      K     108         18.269
LGA    T     109      T     109         15.124
LGA    G     110      G     110         19.590
LGA    F     111      F     111         18.352
LGA    D     112      D     112         19.199
LGA    P     113      P     113         15.049
LGA    R     114      R     114         16.298
LGA    R     115      R     115         12.869
LGA    L     116      L     116         10.317
LGA    T     117      T     117         13.484
LGA    T     118      T     118         10.892
LGA    S     119      S     119         12.556
LGA    Y     120      Y     120          7.442
LGA    L     121      L     121          8.300
LGA    Y     122      Y     122          3.289
LGA    F     123      F     123          5.270
LGA    R     124      R     124          5.050
LGA    I     125      I     125          7.161
LGA    S     126      S     126         10.586
LGA    P     127      P     127         13.240
LGA    R     128      R     128         10.286
LGA    R     129      R     129         13.679
LGA    V     130      V     130         18.759
LGA    Q     131      Q     131         21.684
LGA    A     132      A     132         20.533
LGA    W     133      W     133         25.670
LGA    R     134      R     134         31.476
LGA    E     135      E     135         32.860
LGA    A     136      A     136         32.210
LGA    N     137      N     137         35.737
LGA    E     138      E     138         32.781
LGA    L     139      L     139         30.216
LGA    S     140      S     140         31.620
LGA    G     141      G     141         31.363
LGA    R     142      R     142         28.910
LGA    E     143      E     143         25.487
LGA    L     144      L     144         25.224
LGA    M     145      M     145         22.351
LGA    R     146      R     146         28.446
LGA    D     147      D     147         28.852
LGA    G     148      G     148         23.962
LGA    E     149      E     149         23.583
LGA    W     150      W     150         23.430
LGA    L     151      L     151         23.336
LGA    V     152      V     152         22.860
LGA    T     153      T     153         23.601
LGA    D     154      D     154         23.632

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  154  154    4.0     19    2.63    16.721    12.948     0.696

LGA_LOCAL      RMSD =  2.631  Number of atoms =   19  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 19.301  Number of atoms =  154 
Std_ALL_ATOMS  RMSD = 13.865  (standard rmsd on all 154 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.005518 * X  +  -0.905454 * Y  +  -0.424408 * Z  +   3.977631
  Y_new =   0.870179 * X  +  -0.204767 * Y  +   0.448173 * Z  +  33.573795
  Z_new =  -0.492705 * X  +  -0.371784 * Y  +   0.786777 * Z  +  20.029510 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.441440    2.700153  [ DEG:   -25.2926    154.7074 ]
  Theta =   0.515195    2.626397  [ DEG:    29.5185    150.4815 ]
  Phi   =   1.564455   -1.577137  [ DEG:    89.6367    -90.3633 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0370TS168_4                                  
REMARK     2: T0370.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0370TS168_4.T0370.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  154  154   4.0   19   2.63  12.948    13.86
REMARK  ---------------------------------------------------------- 
MOLECULE T0370TS168_4
PFRMAT TS
TARGET T0370
MODEL 4
PARENT N/A
ATOM      1  CA  MET     1      31.983  14.821  32.098  1.00 25.00           C
ATOM      2  CA  THR     2      28.517  16.191  32.925  1.00 25.00           C
ATOM      3  CA  THR     3      28.214  19.864  32.144  1.00 25.00           C
ATOM      4  CA  PRO     4      24.728  21.186  32.904  1.00 25.00           C
ATOM      5  CA  PRO     5      20.989  21.078  32.206  1.00 25.00           C
ATOM      6  CA  ALA     6      19.223  23.010  29.512  1.00 25.00           C
ATOM      7  CA  ARG     7      21.172  26.190  30.376  1.00 25.00           C
ATOM      8  CA  THR     8      22.206  26.583  26.710  1.00 25.00           C
ATOM      9  CA  ALA     9      18.562  26.155  25.612  1.00 25.00           C
ATOM     10  CA  LYS    10      17.460  28.800  28.153  1.00 25.00           C
ATOM     11  CA  GLN    11      20.151  31.198  26.861  1.00 25.00           C
ATOM     12  CA  ARG    12      18.985  30.609  23.262  1.00 25.00           C
ATOM     13  CA  ILE    13      15.363  31.303  24.296  1.00 25.00           C
ATOM     14  CA  GLN    14      16.453  34.540  26.029  1.00 25.00           C
ATOM     15  CA  ASP    15      18.361  35.610  22.885  1.00 25.00           C
ATOM     16  CA  THR    16      15.274  34.891  20.736  1.00 25.00           C
ATOM     17  CA  LEU    17      13.104  36.959  23.119  1.00 25.00           C
ATOM     18  CA  ASN    18      15.610  39.849  22.933  1.00 25.00           C
ATOM     19  CA  ARG    19      15.575  39.665  19.108  1.00 25.00           C
ATOM     20  CA  LEU    20      11.746  39.728  19.116  1.00 25.00           C
ATOM     21  CA  GLU    21      11.775  42.778  21.431  1.00 25.00           C
ATOM     22  CA  LEU    22      10.363  41.129  24.606  1.00 25.00           C
ATOM     23  CA  ASP    23      10.373  44.596  26.236  1.00 25.00           C
ATOM     24  CA  VAL    24       7.726  44.983  23.471  1.00 25.00           C
ATOM     25  CA  ASP    25       5.399  41.981  23.969  1.00 25.00           C
ATOM     26  CA  ALA    26       2.597  44.317  25.136  1.00 25.00           C
ATOM     27  CA  TRP    27       3.129  46.533  22.058  1.00 25.00           C
ATOM     28  CA  VAL    28       2.978  43.454  19.785  1.00 25.00           C
ATOM     29  CA  SER    29      -0.270  42.333  21.477  1.00 25.00           C
ATOM     30  CA  THR    30      -1.760  45.828  20.987  1.00 25.00           C
ATOM     31  CA  ALA    31      -1.332  48.328  23.783  1.00 25.00           C
ATOM     32  CA  GLY    32      -5.052  47.974  24.750  1.00 25.00           C
ATOM     33  CA  ALA    33      -6.752  45.634  22.231  1.00 25.00           C
ATOM     34  CA  ASP    34      -9.880  46.686  24.007  1.00 25.00           C
ATOM     35  CA  GLY    35      -8.882  44.001  26.574  1.00 25.00           C
ATOM     36  CA  GLY    36      -8.778  40.847  24.453  1.00 25.00           C
ATOM     37  CA  ALA    37      -5.210  39.537  24.298  1.00 25.00           C
ATOM     38  CA  PRO    38      -2.669  37.106  25.591  1.00 25.00           C
ATOM     39  CA  TYR    39      -1.043  37.249  22.176  1.00 25.00           C
ATOM     40  CA  LEU    40      -2.512  33.727  21.836  1.00 25.00           C
ATOM     41  CA  VAL    41      -0.683  30.536  20.799  1.00 25.00           C
ATOM     42  CA  PRO    42       1.547  29.142  23.627  1.00 25.00           C
ATOM     43  CA  LEU    43       3.445  28.592  20.367  1.00 25.00           C
ATOM     44  CA  SER    44       6.965  27.382  19.574  1.00 25.00           C
ATOM     45  CA  TYR    45       7.513  31.036  18.763  1.00 25.00           C
ATOM     46  CA  LEU    46      10.591  32.279  20.650  1.00 25.00           C
ATOM     47  CA  TRP    47      11.050  28.822  22.130  1.00 25.00           C
ATOM     48  CA  ASP    48      11.100  25.109  23.031  1.00 25.00           C
ATOM     49  CA  GLY    49       9.441  23.596  26.161  1.00 25.00           C
ATOM     50  CA  GLU    50       7.602  26.896  26.850  1.00 25.00           C
ATOM     51  CA  THR    51       7.663  30.615  26.007  1.00 25.00           C
ATOM     52  CA  PHE    52       5.720  32.880  23.587  1.00 25.00           C
ATOM     53  CA  LEU    53       2.809  33.661  21.266  1.00 25.00           C
ATOM     54  CA  VAL    54       1.432  33.184  17.745  1.00 25.00           C
ATOM     55  CA  ALA    55      -2.266  33.627  17.129  1.00 25.00           C
ATOM     56  CA  THR    56      -4.606  30.722  17.626  1.00 25.00           C
ATOM     57  CA  PRO    57      -7.998  31.270  16.027  1.00 25.00           C
ATOM     58  CA  ALA    58     -11.157  30.886  14.004  1.00 25.00           C
ATOM     59  CA  ALA    59     -13.114  27.919  12.539  1.00 25.00           C
ATOM     60  CA  SER    60     -12.200  25.061  14.932  1.00 25.00           C
ATOM     61  CA  PRO    61     -15.173  22.856  15.809  1.00 25.00           C
ATOM     62  CA  THR    62     -14.953  20.511  12.786  1.00 25.00           C
ATOM     63  CA  GLY    63     -13.823  21.684   9.342  1.00 25.00           C
ATOM     64  CA  ARG    64     -10.316  22.623   8.302  1.00 25.00           C
ATOM     65  CA  ASN    65      -7.462  21.684  10.714  1.00 25.00           C
ATOM     66  CA  LEU    66      -4.752  23.579  12.581  1.00 25.00           C
ATOM     67  CA  SER    67      -3.102  20.165  12.918  1.00 25.00           C
ATOM     68  CA  GLU    68      -4.111  19.643  16.602  1.00 25.00           C
ATOM     69  CA  THR    69      -3.348  23.188  17.774  1.00 25.00           C
ATOM     70  CA  GLY    70      -0.923  25.963  18.643  1.00 25.00           C
ATOM     71  CA  ARG    71       0.913  26.437  15.362  1.00 25.00           C
ATOM     72  CA  VAL    72      -0.296  29.892  14.370  1.00 25.00           C
ATOM     73  CA  ARG    73      -0.080  33.492  13.233  1.00 25.00           C
ATOM     74  CA  LEU    74       1.589  36.870  13.815  1.00 25.00           C
ATOM     75  CA  GLY    75       1.420  38.361  17.281  1.00 25.00           C
ATOM     76  CA  ILE    76      -1.090  41.213  16.641  1.00 25.00           C
ATOM     77  CA  GLY    77      -0.353  44.834  15.797  1.00 25.00           C
ATOM     78  CA  PRO    78       2.748  47.090  16.035  1.00 25.00           C
ATOM     79  CA  THR    79       4.579  46.370  12.732  1.00 25.00           C
ATOM     80  CA  ARG    80       5.148  42.643  12.819  1.00 25.00           C
ATOM     81  CA  ASP    81       5.783  40.454  15.899  1.00 25.00           C
ATOM     82  CA  LEU    82       6.608  39.415  19.428  1.00 25.00           C
ATOM     83  CA  VAL    83       5.938  35.948  18.063  1.00 25.00           C
ATOM     84  CA  LEU    84       5.365  33.350  15.322  1.00 25.00           C
ATOM     85  CA  VAL    85       5.154  29.520  15.288  1.00 25.00           C
ATOM     86  CA  GLU    86       3.520  30.119  11.877  1.00 25.00           C
ATOM     87  CA  GLY    87       6.632  31.942  10.657  1.00 25.00           C
ATOM     88  CA  THR    88       8.356  28.533  10.740  1.00 25.00           C
ATOM     89  CA  ALA    89      10.433  28.164  13.974  1.00 25.00           C
ATOM     90  CA  LEU    90       9.108  24.588  13.739  1.00 25.00           C
ATOM     91  CA  PRO    91      11.209  23.063  10.932  1.00 25.00           C
ATOM     92  CA  LEU    92       9.696  24.071   7.590  1.00 25.00           C
ATOM     93  CA  GLU    93      12.484  22.794   5.340  1.00 25.00           C
ATOM     94  CA  PRO    94      15.279  25.093   6.407  1.00 25.00           C
ATOM     95  CA  ALA    95      14.791  28.030   4.112  1.00 25.00           C
ATOM     96  CA  GLY    96      12.187  30.164   5.981  1.00 25.00           C
ATOM     97  CA  LEU    97      12.536  33.643   7.370  1.00 25.00           C
ATOM     98  CA  PRO    98      15.475  35.004   5.382  1.00 25.00           C
ATOM     99  CA  ASP    99      14.671  38.649   4.575  1.00 25.00           C
ATOM    100  CA  GLY   100      14.500  41.307   7.196  1.00 25.00           C
ATOM    101  CA  VAL   101      11.658  39.785   9.168  1.00 25.00           C
ATOM    102  CA  GLY   102      13.913  39.938  12.200  1.00 25.00           C
ATOM    103  CA  ASP   103      15.848  36.630  12.345  1.00 25.00           C
ATOM    104  CA  THR   104      12.412  35.130  12.912  1.00 25.00           C
ATOM    105  CA  PHE   105       8.817  36.369  12.774  1.00 25.00           C
ATOM    106  CA  ALA   106       6.135  37.012  10.235  1.00 25.00           C
ATOM    107  CA  GLU   107       4.271  36.633   6.996  1.00 25.00           C
ATOM    108  CA  LYS   108       4.013  37.415   3.285  1.00 25.00           C
ATOM    109  CA  THR   109       0.413  36.214   3.496  1.00 25.00           C
ATOM    110  CA  GLY   110      -0.135  34.995  -0.077  1.00 25.00           C
ATOM    111  CA  PHE   111      -3.863  35.368  -0.130  1.00 25.00           C
ATOM    112  CA  ASP   112      -3.366  39.116   0.202  1.00 25.00           C
ATOM    113  CA  PRO   113      -4.911  40.171   3.557  1.00 25.00           C
ATOM    114  CA  ARG   114      -5.538  43.164   5.862  1.00 25.00           C
ATOM    115  CA  ARG   115      -9.110  41.945   6.513  1.00 25.00           C
ATOM    116  CA  LEU   116     -10.305  38.295   6.293  1.00 25.00           C
ATOM    117  CA  THR   117      -7.058  36.337   5.996  1.00 25.00           C
ATOM    118  CA  THR   118      -5.066  37.673   8.945  1.00 25.00           C
ATOM    119  CA  SER   119      -3.471  38.508  12.262  1.00 25.00           C
ATOM    120  CA  TYR   120      -4.764  37.852  15.769  1.00 25.00           C
ATOM    121  CA  LEU   121      -5.571  39.432  19.131  1.00 25.00           C
ATOM    122  CA  TYR   122      -6.909  36.189  20.564  1.00 25.00           C
ATOM    123  CA  PHE   123      -6.780  33.533  23.271  1.00 25.00           C
ATOM    124  CA  ARG   124      -5.712  30.777  25.734  1.00 25.00           C
ATOM    125  CA  ILE   125      -5.285  27.948  23.229  1.00 25.00           C
ATOM    126  CA  SER   126      -6.251  24.292  23.724  1.00 25.00           C
ATOM    127  CA  PRO   127      -4.770  21.777  26.133  1.00 25.00           C
ATOM    128  CA  ARG   128      -0.944  21.725  25.985  1.00 25.00           C
ATOM    129  CA  ARG   129      -0.920  25.331  24.696  1.00 25.00           C
ATOM    130  CA  VAL   130      -3.258  26.389  27.541  1.00 25.00           C
ATOM    131  CA  GLN   131      -0.971  24.673  30.089  1.00 25.00           C
ATOM    132  CA  ALA   132       2.069  26.469  28.609  1.00 25.00           C
ATOM    133  CA  TRP   133       0.226  29.819  28.823  1.00 25.00           C
ATOM    134  CA  ARG   134      -0.678  29.117  32.477  1.00 25.00           C
ATOM    135  CA  GLU   135       2.978  28.269  33.243  1.00 25.00           C
ATOM    136  CA  ALA   136       4.109  31.524  31.571  1.00 25.00           C
ATOM    137  CA  ASN   137       1.558  33.500  33.635  1.00 25.00           C
ATOM    138  CA  GLU   138       2.811  31.817  36.839  1.00 25.00           C
ATOM    139  CA  LEU   139       6.424  32.684  35.911  1.00 25.00           C
ATOM    140  CA  SER   140       5.413  36.324  35.278  1.00 25.00           C
ATOM    141  CA  GLY   141       3.649  36.450  38.674  1.00 25.00           C
ATOM    142  CA  ARG   142       6.769  35.025  40.376  1.00 25.00           C
ATOM    143  CA  GLU   143       8.948  37.651  38.637  1.00 25.00           C
ATOM    144  CA  LEU   144       6.568  40.422  39.787  1.00 25.00           C
ATOM    145  CA  MET   145       6.507  41.167  36.030  1.00 25.00           C
ATOM    146  CA  ARG   146       4.801  44.364  37.189  1.00 25.00           C
ATOM    147  CA  ASP   147       1.206  43.503  38.043  1.00 25.00           C
ATOM    148  CA  GLY   148      -0.429  42.742  34.766  1.00 25.00           C
ATOM    149  CA  GLU   149      -0.666  42.415  30.998  1.00 25.00           C
ATOM    150  CA  TRP   150      -1.007  42.041  27.265  1.00 25.00           C
ATOM    151  CA  LEU   151       1.809  39.460  26.666  1.00 25.00           C
ATOM    152  CA  VAL   152       2.248  35.803  25.845  1.00 25.00           C
ATOM    153  CA  THR   153       5.670  36.243  27.310  1.00 25.00           C
ATOM    154  CA  ASP   154       7.892  36.100  30.433  1.00 25.00           C
TER
END
