
PFRMAT TS
TARGET T0307
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0307 model 3 Wed May 31 14:27:24 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  3
PARENT N/A
ATOM      2  N   SER    14       4.445  10.028 -10.023  1.00  0.00
ATOM      3  CA  SER    14       4.020  10.212 -11.424  1.00  0.00
ATOM      4  CB  SER    14       4.204   8.915 -12.214  1.00  0.00
ATOM      5  OG  SER    14       3.297   7.917 -11.777  1.00  0.00
ATOM      6  O   SER    14       1.734  10.481 -10.528  1.00  0.00
ATOM      7  C   SER    14       2.534  10.614 -11.500  1.00  0.00
ATOM      8  N   GLY    15       2.220  11.168 -12.694  1.00  0.00
ATOM      9  CA  GLY    15       0.952  11.649 -13.039  1.00  0.00
ATOM     10  O   GLY    15      -1.175  10.797 -12.230  1.00  0.00
ATOM     11  C   GLY    15      -0.121  10.513 -12.814  1.00  0.00
ATOM     12  N   GLN    16       0.231   9.336 -13.226  1.00  0.00
ATOM     13  CA  GLN    16      -0.755   8.245 -13.020  1.00  0.00
ATOM     14  CB  GLN    16      -0.290   6.965 -13.718  1.00  0.00
ATOM     15  CG  GLN    16      -0.335   7.033 -15.236  1.00  0.00
ATOM     16  CD  GLN    16       0.236   5.792 -15.892  1.00  0.00
ATOM     17  OE1 GLN    16       0.763   4.908 -15.216  1.00  0.00
ATOM     18  NE2 GLN    16       0.132   5.722 -17.214  1.00  0.00
ATOM     19  O   GLN    16      -2.092   7.412 -11.153  1.00  0.00
ATOM     20  C   GLN    16      -0.977   7.893 -11.554  1.00  0.00
ATOM     21  N   GLU    17       0.074   7.869 -10.745  1.00  0.00
ATOM     22  CA  GLU    17      -0.095   7.619  -9.350  1.00  0.00
ATOM     23  CB  GLU    17       1.261   7.592  -8.642  1.00  0.00
ATOM     24  CG  GLU    17       2.112   6.378  -8.974  1.00  0.00
ATOM     25  CD  GLU    17       3.493   6.446  -8.353  1.00  0.00
ATOM     26  OE1 GLU    17       3.811   7.476  -7.724  1.00  0.00
ATOM     27  OE2 GLU    17       4.258   5.468  -8.497  1.00  0.00
ATOM     28  O   GLU    17      -1.784   8.511  -7.932  1.00  0.00
ATOM     29  C   GLU    17      -0.951   8.743  -8.812  1.00  0.00
ATOM     33  N   THR    19      -0.679   9.950  -9.324  1.00  0.00
ATOM     34  CA  THR    19      -1.421  11.114  -8.745  1.00  0.00
ATOM     35  CB  THR    19      -0.809  12.454  -9.194  1.00  0.00
ATOM     36  CG2 THR    19      -1.596  13.619  -8.617  1.00  0.00
ATOM     37  OG1 THR    19       0.548  12.540  -8.741  1.00  0.00
ATOM     38  O   THR    19      -3.787  11.230  -8.295  1.00  0.00
ATOM     39  C   THR    19      -2.898  11.141  -9.159  1.00  0.00
ATOM     40  N   ALA    20      -3.150  10.651 -10.382  1.00  0.00
ATOM     41  CA  ALA    20      -4.534  10.435 -10.829  1.00  0.00
ATOM     42  CB  ALA    20      -4.566  10.093 -12.310  1.00  0.00
ATOM     43  O   ALA    20      -6.374   9.396  -9.712  1.00  0.00
ATOM     44  C   ALA    20      -5.196   9.302 -10.077  1.00  0.00
ATOM     48  N   LYS    23      -6.307  10.856  -6.729  1.00  0.00
ATOM     49  CA  LYS    23      -7.453  11.784  -6.832  1.00  0.00
ATOM     50  CB  LYS    23      -7.275  12.724  -8.027  1.00  0.00
ATOM     51  CG  LYS    23      -6.122  13.702  -7.880  1.00  0.00
ATOM     52  CD  LYS    23      -6.022  14.621  -9.087  1.00  0.00
ATOM     53  CE  LYS    23      -4.857  15.588  -8.949  1.00  0.00
ATOM     54  NZ  LYS    23      -4.737  16.486 -10.130  1.00  0.00
ATOM     55  O   LYS    23      -9.724  11.276  -6.351  1.00  0.00
ATOM     56  C   LYS    23      -8.730  10.993  -7.015  1.00  0.00
ATOM     60  N   LYS    26      -9.532   9.679  -3.694  1.00  0.00
ATOM     61  CA  LYS    26      -9.980  10.822  -2.898  1.00  0.00
ATOM     62  CB  LYS    26      -9.229  12.089  -3.310  1.00  0.00
ATOM     63  CG  LYS    26      -7.761  12.097  -2.914  1.00  0.00
ATOM     64  CD  LYS    26      -7.077  13.381  -3.354  1.00  0.00
ATOM     65  CE  LYS    26      -5.604  13.377  -2.980  1.00  0.00
ATOM     66  NZ  LYS    26      -4.912  14.613  -3.438  1.00  0.00
ATOM     67  O   LYS    26     -12.276  11.252  -2.212  1.00  0.00
ATOM     68  C   LYS    26     -11.481  11.079  -3.087  1.00  0.00
ATOM     69  N   SER    27     -11.798  11.115  -4.425  1.00  0.00
ATOM     70  CA  SER    27     -13.195  11.369  -4.816  1.00  0.00
ATOM     71  CB  SER    27     -13.342  11.330  -6.338  1.00  0.00
ATOM     72  OG  SER    27     -12.633  12.396  -6.946  1.00  0.00
ATOM     73  O   SER    27     -15.288  10.722  -3.915  1.00  0.00
ATOM     74  C   SER    27     -14.151  10.376  -4.266  1.00  0.00
ATOM     75  N   MET    28     -13.771   9.101  -4.146  1.00  0.00
ATOM     76  CA  MET    28     -14.591   8.051  -3.579  1.00  0.00
ATOM     77  CB  MET    28     -13.910   6.691  -3.745  1.00  0.00
ATOM     78  CG  MET    28     -13.846   6.200  -5.183  1.00  0.00
ATOM     79  SD  MET    28     -15.478   5.988  -5.920  1.00  0.00
ATOM     80  CE  MET    28     -16.092   4.592  -4.980  1.00  0.00
ATOM     81  O   MET    28     -15.934   8.227  -1.553  1.00  0.00
ATOM     82  C   MET    28     -14.818   8.312  -2.062  1.00  0.00
ATOM     83  N   VAL    29     -13.715   8.679  -1.390  1.00  0.00
ATOM     84  CA  VAL    29     -13.801   8.913   0.072  1.00  0.00
ATOM     85  CB  VAL    29     -12.406   9.096   0.697  1.00  0.00
ATOM     86  CG1 VAL    29     -12.520   9.355   2.192  1.00  0.00
ATOM     87  CG2 VAL    29     -11.560   7.850   0.489  1.00  0.00
ATOM     88  O   VAL    29     -15.267  10.264   1.424  1.00  0.00
ATOM     89  C   VAL    29     -14.608  10.163   0.398  1.00  0.00
ATOM     90  N   MET    30     -19.781  13.379  -0.295  1.00  0.00
ATOM     91  CA  MET    30     -20.680  14.486  -0.754  1.00  0.00
ATOM     92  CB  MET    30     -21.079  15.376   0.424  1.00  0.00
ATOM     93  CG  MET    30     -21.976  14.691   1.443  1.00  0.00
ATOM     94  SD  MET    30     -23.514  14.087   0.720  1.00  0.00
ATOM     95  CE  MET    30     -24.345  15.629   0.353  1.00  0.00
ATOM     96  O   MET    30     -20.713  16.360  -2.166  1.00  0.00
ATOM     97  C   MET    30     -20.007  15.357  -1.782  1.00  0.00
ATOM     98  N   ALA    31     -18.850  15.100  -2.271  1.00  0.00
ATOM     99  CA  ALA    31     -18.170  15.936  -3.271  1.00  0.00
ATOM    100  CB  ALA    31     -18.957  15.949  -4.574  1.00  0.00
ATOM    101  O   ALA    31     -18.237  18.343  -3.606  1.00  0.00
ATOM    102  C   ALA    31     -18.027  17.350  -2.808  1.00  0.00
ATOM    103  N   ASP    32     -17.695  17.624  -1.556  1.00  0.00
ATOM    104  CA  ASP    32     -17.487  18.989  -1.085  1.00  0.00
ATOM    105  CB  ASP    32     -17.665  19.064   0.433  1.00  0.00
ATOM    106  CG  ASP    32     -19.113  18.911   0.857  1.00  0.00
ATOM    107  OD1 ASP    32     -20.001  19.024  -0.012  1.00  0.00
ATOM    108  OD2 ASP    32     -19.357  18.679   2.060  1.00  0.00
ATOM    109  O   ASP    32     -15.769  20.712  -1.248  1.00  0.00
ATOM    110  C   ASP    32     -16.082  19.502  -1.414  1.00  0.00
ATOM    111  N   GLY    33     -15.197  18.606  -1.791  1.00  0.00
ATOM    112  CA  GLY    33     -13.810  18.852  -2.079  1.00  0.00
ATOM    113  O   GLY    33     -11.743  18.793  -0.922  1.00  0.00
ATOM    114  C   GLY    33     -12.920  18.545  -0.818  1.00  0.00
ATOM    115  N   LYS    34     -13.570  18.084   0.218  1.00  0.00
ATOM    116  CA  LYS    34     -12.754  17.768   1.445  1.00  0.00
ATOM    117  CB  LYS    34     -12.811  18.930   2.440  1.00  0.00
ATOM    118  CG  LYS    34     -14.200  19.213   2.986  1.00  0.00
ATOM    119  CD  LYS    34     -14.191  20.407   3.926  1.00  0.00
ATOM    120  CE  LYS    34     -15.572  20.661   4.509  1.00  0.00
ATOM    121  NZ  LYS    34     -15.569  21.804   5.463  1.00  0.00
ATOM    122  O   LYS    34     -14.552  16.236   1.951  1.00  0.00
ATOM    123  C   LYS    34     -13.375  16.501   2.057  1.00  0.00
ATOM    124  N   ILE    35     -12.385  15.831   2.760  1.00  0.00
ATOM    125  CA  ILE    35     -12.592  14.551   3.402  1.00  0.00
ATOM    126  CB  ILE    35     -11.410  13.595   3.152  1.00  0.00
ATOM    127  CG1 ILE    35     -11.145  13.460   1.651  1.00  0.00
ATOM    128  CG2 ILE    35     -11.710  12.216   3.715  1.00  0.00
ATOM    129  CD1 ILE    35     -12.347  12.997   0.858  1.00  0.00
ATOM    130  O   ILE    35     -11.843  15.406   5.517  1.00  0.00
ATOM    131  C   ILE    35     -12.738  14.748   4.919  1.00  0.00
ATOM    135  N   ALA    38     -17.574  12.120   8.302  1.00  0.00
ATOM    136  CA  ALA    38     -18.833  11.660   7.650  1.00  0.00
ATOM    137  CB  ALA    38     -19.792  12.826   7.466  1.00  0.00
ATOM    138  O   ALA    38     -19.629  10.388   5.770  1.00  0.00
ATOM    139  C   ALA    38     -18.703  11.039   6.287  1.00  0.00
ATOM    143  N   ALA    41     -16.777   7.578   7.427  1.00  0.00
ATOM    144  CA  ALA    41     -17.793   6.680   8.038  1.00  0.00
ATOM    145  CB  ALA    41     -18.665   7.453   9.016  1.00  0.00
ATOM    146  O   ALA    41     -19.102   4.924   7.157  1.00  0.00
ATOM    147  C   ALA    41     -18.708   6.061   7.000  1.00  0.00
ATOM    148  N   VAL    42     -19.181   6.835   6.001  1.00  0.00
ATOM    149  CA  VAL    42     -20.018   6.262   4.917  1.00  0.00
ATOM    150  CB  VAL    42     -20.470   7.345   3.921  1.00  0.00
ATOM    151  CG1 VAL    42     -21.153   6.712   2.719  1.00  0.00
ATOM    152  CG2 VAL    42     -21.450   8.301   4.583  1.00  0.00
ATOM    153  O   VAL    42     -19.784   4.129   3.824  1.00  0.00
ATOM    154  C   VAL    42     -19.287   5.168   4.070  1.00  0.00
ATOM    155  N   MET    43     -18.062   5.544   3.718  1.00  0.00
ATOM    156  CA  MET    43     -17.144   4.696   2.946  1.00  0.00
ATOM    157  CB  MET    43     -15.752   5.326   2.890  1.00  0.00
ATOM    158  CG  MET    43     -14.732   4.510   2.112  1.00  0.00
ATOM    159  SD  MET    43     -13.084   5.240   2.146  1.00  0.00
ATOM    160  CE  MET    43     -12.605   4.914   3.840  1.00  0.00
ATOM    161  O   MET    43     -17.057   2.292   2.974  1.00  0.00
ATOM    162  C   MET    43     -17.087   3.328   3.671  1.00  0.00
ATOM    163  N   THR    44     -16.920   3.454   5.002  1.00  0.00
ATOM    164  CA  THR    44     -16.732   2.136   5.722  1.00  0.00
ATOM    165  CB  THR    44     -16.533   2.341   7.235  1.00  0.00
ATOM    166  CG2 THR    44     -15.313   3.210   7.499  1.00  0.00
ATOM    167  OG1 THR    44     -17.688   2.984   7.788  1.00  0.00
ATOM    168  O   THR    44     -17.773  -0.057   5.387  1.00  0.00
ATOM    169  C   THR    44     -17.902   1.227   5.558  1.00  0.00
ATOM    173  N   ILE    52     -17.691   0.668  13.212  1.00  0.00
ATOM    174  CA  ILE    52     -16.747   1.812  13.227  1.00  0.00
ATOM    175  CB  ILE    52     -17.078   2.834  12.125  1.00  0.00
ATOM    176  CG1 ILE    52     -16.935   2.195  10.744  1.00  0.00
ATOM    177  CG2 ILE    52     -16.138   4.027  12.206  1.00  0.00
ATOM    178  CD1 ILE    52     -15.523   1.764  10.414  1.00  0.00
ATOM    179  O   ILE    52     -17.915   2.749  15.011  1.00  0.00
ATOM    180  C   ILE    52     -16.804   2.535  14.574  1.00  0.00
ATOM    181  N   LEU    53     -15.689   2.800  15.202  1.00  0.00
ATOM    182  CA  LEU    53     -15.691   3.550  16.491  1.00  0.00
ATOM    183  CB  LEU    53     -14.903   2.783  17.556  1.00  0.00
ATOM    184  CG  LEU    53     -15.413   1.383  17.900  1.00  0.00
ATOM    185  CD1 LEU    53     -14.491   0.706  18.903  1.00  0.00
ATOM    186  CD2 LEU    53     -16.807   1.450  18.505  1.00  0.00
ATOM    187  O   LEU    53     -14.032   4.778  15.398  1.00  0.00
ATOM    188  C   LEU    53     -15.027   4.863  16.122  1.00  0.00
ATOM    189  N   GLN    54     -15.491   5.983  16.713  1.00  0.00
ATOM    190  CA  GLN    54     -15.023   7.329  16.408  1.00  0.00
ATOM    191  CB  GLN    54     -15.804   8.365  17.222  1.00  0.00
ATOM    192  CG  GLN    54     -17.249   8.534  16.786  1.00  0.00
ATOM    193  CD  GLN    54     -18.011   9.509  17.662  1.00  0.00
ATOM    194  OE1 GLN    54     -17.472  10.038  18.634  1.00  0.00
ATOM    195  NE2 GLN    54     -19.273   9.748  17.321  1.00  0.00
ATOM    196  O   GLN    54     -12.992   8.504  16.191  1.00  0.00
ATOM    197  C   GLN    54     -13.536   7.549  16.722  1.00  0.00
ATOM    198  N   ASP    55     -13.232   6.717  17.646  1.00  0.00
ATOM    199  CA  ASP    55     -11.861   6.855  18.154  1.00  0.00
ATOM    200  CB  ASP    55     -11.600   5.843  19.271  1.00  0.00
ATOM    201  CG  ASP    55     -12.314   6.199  20.560  1.00  0.00
ATOM    202  OD1 ASP    55     -12.813   7.340  20.667  1.00  0.00
ATOM    203  OD2 ASP    55     -12.373   5.340  21.464  1.00  0.00
ATOM    204  O   ASP    55      -9.867   7.373  16.857  1.00  0.00
ATOM    205  C   ASP    55     -10.851   6.613  17.035  1.00  0.00
ATOM    206  N   GLN    56     -11.220   5.653  16.219  1.00  0.00
ATOM    207  CA  GLN    56     -10.435   5.214  15.061  1.00  0.00
ATOM    208  CB  GLN    56     -10.923   3.851  14.567  1.00  0.00
ATOM    209  CG  GLN    56     -10.630   2.703  15.519  1.00  0.00
ATOM    210  CD  GLN    56     -11.177   1.380  15.023  1.00  0.00
ATOM    211  OE1 GLN    56     -11.876   1.327  14.011  1.00  0.00
ATOM    212  NE2 GLN    56     -10.860   0.305  15.736  1.00  0.00
ATOM    213  O   GLN    56      -9.590   6.480  13.178  1.00  0.00
ATOM    214  C   GLN    56     -10.569   6.225  13.924  1.00  0.00
ATOM    215  N   VAL    57     -11.804   6.674  13.730  1.00  0.00
ATOM    216  CA  VAL    57     -12.082   7.742  12.755  1.00  0.00
ATOM    217  CB  VAL    57     -13.580   8.097  12.720  1.00  0.00
ATOM    218  CG1 VAL    57     -13.831   9.257  11.767  1.00  0.00
ATOM    219  CG2 VAL    57     -14.401   6.906  12.253  1.00  0.00
ATOM    220  O   VAL    57     -10.807   9.717  12.190  1.00  0.00
ATOM    221  C   VAL    57     -11.309   9.018  13.104  1.00  0.00
ATOM    225  N   LEU    60      -7.505   8.471  12.322  1.00  0.00
ATOM    226  CA  LEU    60      -7.392   8.649  10.894  1.00  0.00
ATOM    227  CB  LEU    60      -8.640   8.114  10.188  1.00  0.00
ATOM    228  CG  LEU    60      -8.668   8.253   8.663  1.00  0.00
ATOM    229  CD1 LEU    60      -7.528   7.472   8.032  1.00  0.00
ATOM    230  CD2 LEU    60      -9.979   7.722   8.100  1.00  0.00
ATOM    231  O   LEU    60      -6.319  10.573   9.879  1.00  0.00
ATOM    232  C   LEU    60      -7.244  10.138  10.618  1.00  0.00
ATOM    233  N   LEU    61      -8.173  10.893  11.166  1.00  0.00
ATOM    234  CA  LEU    61      -8.239  12.296  10.775  1.00  0.00
ATOM    235  CB  LEU    61      -9.636  12.862  11.043  1.00  0.00
ATOM    236  CG  LEU    61     -10.782  12.244  10.240  1.00  0.00
ATOM    237  CD1 LEU    61     -12.119  12.820  10.680  1.00  0.00
ATOM    238  CD2 LEU    61     -10.609  12.521   8.755  1.00  0.00
ATOM    239  O   LEU    61      -7.039  14.334  11.118  1.00  0.00
ATOM    240  C   LEU    61      -7.257  13.170  11.524  1.00  0.00
ATOM    241  N   LYS    62      -6.610  12.611  12.505  1.00  0.00
ATOM    242  CA  LYS    62      -5.685  13.420  13.291  1.00  0.00
ATOM    243  CB  LYS    62      -5.611  12.903  14.729  1.00  0.00
ATOM    244  CG  LYS    62      -6.912  13.033  15.504  1.00  0.00
ATOM    245  CD  LYS    62      -6.769  12.498  16.918  1.00  0.00
ATOM    246  CE  LYS    62      -8.083  12.579  17.676  1.00  0.00
ATOM    247  NZ  LYS    62      -7.952  12.082  19.074  1.00  0.00
ATOM    248  O   LYS    62      -3.411  14.187  13.298  1.00  0.00
ATOM    249  C   LYS    62      -4.256  13.427  12.760  1.00  0.00
ATOM    250  N   ALA    63      -4.039  12.704  11.628  1.00  0.00
ATOM    251  CA  ALA    63      -2.772  12.628  10.882  1.00  0.00
ATOM    252  CB  ALA    63      -2.878  11.608   9.760  1.00  0.00
ATOM    253  O   ALA    63      -1.219  14.208  10.063  1.00  0.00
ATOM    254  C   ALA    63      -2.398  13.923  10.272  1.00  0.00
ATOM    255  N   SER    64      -3.467  14.722  10.120  1.00  0.00
ATOM    256  CA  SER    64      -3.156  16.039   9.479  1.00  0.00
ATOM    257  CB  SER    64      -3.710  16.086   8.054  1.00  0.00
ATOM    258  OG  SER    64      -3.097  15.105   7.236  1.00  0.00
ATOM    259  O   SER    64      -4.873  17.122  10.675  1.00  0.00
ATOM    260  C   SER    64      -3.717  17.251  10.175  1.00  0.00
ATOM    261  N   ASP    65      -2.975  18.312  10.253  1.00  0.00
ATOM    262  CA  ASP    65      -3.473  19.566  10.881  1.00  0.00
ATOM    263  CB  ASP    65      -2.329  20.308  11.575  1.00  0.00
ATOM    264  CG  ASP    65      -2.793  21.573  12.269  1.00  0.00
ATOM    265  OD1 ASP    65      -3.977  21.941  12.108  1.00  0.00
ATOM    266  OD2 ASP    65      -1.973  22.200  12.973  1.00  0.00
ATOM    267  O   ASP    65      -3.142  20.781   8.825  1.00  0.00
ATOM    268  C   ASP    65      -4.043  20.364   9.660  1.00  0.00
ATOM    269  N   SER    66      -5.260  20.373   9.560  1.00  0.00
ATOM    270  CA  SER    66      -5.884  20.947   8.355  1.00  0.00
ATOM    271  CB  SER    66      -4.930  20.854   7.162  1.00  0.00
ATOM    272  OG  SER    66      -3.767  21.632   7.377  1.00  0.00
ATOM    273  O   SER    66      -7.574  19.345   8.800  1.00  0.00
ATOM    274  C   SER    66      -7.164  20.195   8.012  1.00  0.00
ATOM    275  N   ILE    67      -8.232  18.567   5.157  1.00  0.00
ATOM    276  CA  ILE    67      -8.130  17.214   4.545  1.00  0.00
ATOM    277  CB  ILE    67      -9.267  16.292   5.023  1.00  0.00
ATOM    278  CG1 ILE    67      -8.916  14.828   4.752  1.00  0.00
ATOM    279  CG2 ILE    67     -10.561  16.621   4.296  1.00  0.00
ATOM    280  CD1 ILE    67      -9.836  13.843   5.441  1.00  0.00
ATOM    281  O   ILE    67      -8.268  16.193   2.343  1.00  0.00
ATOM    282  C   ILE    67      -8.207  17.256   3.019  1.00  0.00
ATOM    283  N   GLU    68      -8.336  18.354   2.415  1.00  0.00
ATOM    284  CA  GLU    68      -8.485  18.484   0.961  1.00  0.00
ATOM    285  CB  GLU    68      -8.526  19.960   0.556  1.00  0.00
ATOM    286  CG  GLU    68      -9.734  20.714   1.083  1.00  0.00
ATOM    287  CD  GLU    68      -9.507  21.285   2.469  1.00  0.00
ATOM    288  OE1 GLU    68      -8.411  21.068   3.027  1.00  0.00
ATOM    289  OE2 GLU    68     -10.425  21.949   2.996  1.00  0.00
ATOM    290  O   GLU    68      -6.236  17.587   0.784  1.00  0.00
ATOM    291  C   GLU    68      -7.310  17.816   0.225  1.00  0.00
ATOM    292  N   ALA    69      -7.418  17.632  -1.060  1.00  0.00
ATOM    293  CA  ALA    69      -6.489  16.889  -1.903  1.00  0.00
ATOM    294  CB  ALA    69      -6.641  17.309  -3.357  1.00  0.00
ATOM    295  O   ALA    69      -4.218  16.118  -1.441  1.00  0.00
ATOM    296  C   ALA    69      -5.029  17.041  -1.607  1.00  0.00
ATOM    297  N   SER    70      -4.686  18.264  -1.537  1.00  0.00
ATOM    298  CA  SER    70      -3.272  18.560  -1.355  1.00  0.00
ATOM    299  CB  SER    70      -3.039  20.073  -1.338  1.00  0.00
ATOM    300  OG  SER    70      -3.335  20.649  -2.598  1.00  0.00
ATOM    301  O   SER    70      -1.644  17.450   0.039  1.00  0.00
ATOM    302  C   SER    70      -2.758  17.981  -0.032  1.00  0.00
ATOM    303  N   GLN    71      -3.616  18.208   0.917  1.00  0.00
ATOM    304  CA  GLN    71      -3.162  17.656   2.209  1.00  0.00
ATOM    305  CB  GLN    71      -4.165  17.986   3.316  1.00  0.00
ATOM    306  CG  GLN    71      -3.742  17.518   4.699  1.00  0.00
ATOM    307  CD  GLN    71      -2.496  18.223   5.196  1.00  0.00
ATOM    308  OE1 GLN    71      -2.379  19.444   5.095  1.00  0.00
ATOM    309  NE2 GLN    71      -1.559  17.454   5.738  1.00  0.00
ATOM    310  O   GLN    71      -2.037  15.570   2.609  1.00  0.00
ATOM    311  C   GLN    71      -3.025  16.127   2.114  1.00  0.00
ATOM    312  N   ALA    72      -3.982  15.610   1.734  1.00  0.00
ATOM    313  CA  ALA    72      -4.043  14.156   1.541  1.00  0.00
ATOM    314  CB  ALA    72      -5.272  13.781   0.727  1.00  0.00
ATOM    315  O   ALA    72      -1.985  12.888   1.347  1.00  0.00
ATOM    316  C   ALA    72      -2.799  13.664   0.798  1.00  0.00
ATOM    320  N   LEU    75       0.411  14.014   2.666  1.00  0.00
ATOM    321  CA  LEU    75       0.535  13.105   3.820  1.00  0.00
ATOM    322  CB  LEU    75      -0.792  13.015   4.576  1.00  0.00
ATOM    323  CG  LEU    75      -0.817  12.089   5.794  1.00  0.00
ATOM    324  CD1 LEU    75       0.174  12.561   6.848  1.00  0.00
ATOM    325  CD2 LEU    75      -2.203  12.063   6.421  1.00  0.00
ATOM    326  O   LEU    75       1.847  11.080   4.042  1.00  0.00
ATOM    327  C   LEU    75       0.923  11.677   3.433  1.00  0.00
ATOM    328  N   ILE    76       0.158  11.118   2.517  1.00  0.00
ATOM    329  CA  ILE    76       0.448   9.773   2.003  1.00  0.00
ATOM    330  CB  ILE    76      -0.694   9.252   1.112  1.00  0.00
ATOM    331  CG1 ILE    76      -2.015   9.247   1.884  1.00  0.00
ATOM    332  CG2 ILE    76      -0.402   7.833   0.648  1.00  0.00
ATOM    333  CD1 ILE    76      -3.217   8.901   1.034  1.00  0.00
ATOM    334  O   ILE    76       2.540   8.847   1.230  1.00  0.00
ATOM    335  C   ILE    76       1.723   9.800   1.175  1.00  0.00
ATOM    336  N   ALA    77       7.905   7.522   1.082  1.00  0.00
ATOM    337  CA  ALA    77       8.961   8.468   0.652  1.00  0.00
ATOM    338  CB  ALA    77       9.547   9.192   1.855  1.00  0.00
ATOM    339  O   ALA    77      11.044   8.608  -0.517  1.00  0.00
ATOM    340  C   ALA    77      10.140   7.850  -0.069  1.00  0.00
ATOM    341  N   ARG    78      10.190   6.511  -0.132  1.00  0.00
ATOM    342  CA  ARG    78      11.256   5.742  -0.787  1.00  0.00
ATOM    343  CB  ARG    78      12.227   5.178   0.254  1.00  0.00
ATOM    344  CG  ARG    78      12.908   6.237   1.106  1.00  0.00
ATOM    345  CD  ARG    78      13.954   6.999   0.308  1.00  0.00
ATOM    346  NE  ARG    78      14.729   7.907   1.150  1.00  0.00
ATOM    347  CZ  ARG    78      14.430   9.188   1.339  1.00  0.00
ATOM    348  NH1 ARG    78      15.193   9.938   2.122  1.00  0.00
ATOM    349  NH2 ARG    78      13.368   9.716   0.745  1.00  0.00
ATOM    350  O   ARG    78      10.989   3.487  -1.635  1.00  0.00
ATOM    351  C   ARG    78      10.501   4.634  -1.521  1.00  0.00
ATOM    352  N   MET    79       9.329   5.010  -2.007  1.00  0.00
ATOM    353  CA  MET    79       8.445   4.108  -2.758  1.00  0.00
ATOM    354  CB  MET    79       7.055   4.066  -2.118  1.00  0.00
ATOM    355  CG  MET    79       6.076   3.142  -2.822  1.00  0.00
ATOM    356  SD  MET    79       4.471   3.074  -2.004  1.00  0.00
ATOM    357  CE  MET    79       4.852   2.034  -0.596  1.00  0.00
ATOM    358  O   MET    79       7.777   5.578  -4.566  1.00  0.00
ATOM    359  C   MET    79       8.193   4.448  -4.228  1.00  0.00
ATOM    360  N   ASP    80       8.552   3.428  -5.086  1.00  0.00
ATOM    361  CA  ASP    80       8.383   3.658  -6.517  1.00  0.00
ATOM    362  CB  ASP    80       9.713   3.468  -7.250  1.00  0.00
ATOM    363  CG  ASP    80      10.756   4.486  -6.838  1.00  0.00
ATOM    364  OD1 ASP    80      10.441   5.694  -6.841  1.00  0.00
ATOM    365  OD2 ASP    80      11.889   4.075  -6.510  1.00  0.00
ATOM    366  O   ASP    80       7.110   1.620  -6.538  1.00  0.00
ATOM    367  C   ASP    80       7.373   2.694  -7.122  1.00  0.00
ATOM    371  N   ARG    83       6.462  -1.133 -11.931  1.00  0.00
ATOM    372  CA  ARG    83       7.358  -1.520 -13.037  1.00  0.00
ATOM    373  CB  ARG    83       6.895  -0.882 -14.349  1.00  0.00
ATOM    374  CG  ARG    83       5.610  -1.471 -14.907  1.00  0.00
ATOM    375  CD  ARG    83       5.170  -0.745 -16.168  1.00  0.00
ATOM    376  NE  ARG    83       3.921  -1.282 -16.700  1.00  0.00
ATOM    377  CZ  ARG    83       3.281  -0.780 -17.753  1.00  0.00
ATOM    378  NH1 ARG    83       2.149  -1.334 -18.167  1.00  0.00
ATOM    379  NH2 ARG    83       3.775   0.275 -18.388  1.00  0.00
ATOM    380  O   ARG    83       9.632  -1.716 -13.080  1.00  0.00
ATOM    381  C   ARG    83       8.811  -0.983 -12.618  1.00  0.00
ATOM    385  N   TYR    86       8.979   0.094 -12.082  1.00  0.00
ATOM    386  CA  TYR    86      10.281   0.623 -11.628  1.00  0.00
ATOM    387  CB  TYR    86      10.101   1.989 -10.960  1.00  0.00
ATOM    388  CG  TYR    86       9.831   3.114 -11.931  1.00  0.00
ATOM    389  CD1 TYR    86       8.556   3.650 -12.062  1.00  0.00
ATOM    390  CD2 TYR    86      10.852   3.639 -12.714  1.00  0.00
ATOM    391  CE1 TYR    86       8.300   4.680 -12.947  1.00  0.00
ATOM    392  CE2 TYR    86      10.613   4.669 -13.604  1.00  0.00
ATOM    393  CZ  TYR    86       9.325   5.188 -13.716  1.00  0.00
ATOM    394  OH  TYR    86       9.072   6.213 -14.598  1.00  0.00
ATOM    395  O   TYR    86      12.116  -0.593 -10.662  1.00  0.00
ATOM    396  C   TYR    86      10.905  -0.344 -10.618  1.00  0.00
ATOM    397  N   VAL    87      10.072  -0.879  -9.735  1.00  0.00
ATOM    398  CA  VAL    87      10.633  -1.819  -8.744  1.00  0.00
ATOM    399  CB  VAL    87       9.592  -2.198  -7.674  1.00  0.00
ATOM    400  CG1 VAL    87      10.187  -3.181  -6.678  1.00  0.00
ATOM    401  CG2 VAL    87       9.133  -0.962  -6.914  1.00  0.00
ATOM    402  O   VAL    87      12.145  -3.689  -9.037  1.00  0.00
ATOM    403  C   VAL    87      11.101  -3.113  -9.395  1.00  0.00
ATOM    407  N   TYR    90      14.594  -3.415 -10.974  1.00  0.00
ATOM    408  CA  TYR    90      15.647  -3.677  -9.972  1.00  0.00
ATOM    409  CB  TYR    90      15.163  -3.292  -8.572  1.00  0.00
ATOM    410  CG  TYR    90      16.207  -3.473  -7.493  1.00  0.00
ATOM    411  CD1 TYR    90      17.250  -2.566  -7.352  1.00  0.00
ATOM    412  CD2 TYR    90      16.144  -4.549  -6.616  1.00  0.00
ATOM    413  CE1 TYR    90      18.207  -2.724  -6.369  1.00  0.00
ATOM    414  CE2 TYR    90      17.092  -4.722  -5.626  1.00  0.00
ATOM    415  CZ  TYR    90      18.129  -3.798  -5.509  1.00  0.00
ATOM    416  OH  TYR    90      19.082  -3.956  -4.527  1.00  0.00
ATOM    417  O   TYR    90      17.138  -5.575 -10.089  1.00  0.00
ATOM    418  C   TYR    90      15.950  -5.190 -10.042  1.00  0.00
ATOM    422  N   ILE    94      17.188  -6.590 -13.208  1.00  0.00
ATOM    423  CA  ILE    94      18.560  -6.433 -13.329  1.00  0.00
ATOM    424  CB  ILE    94      19.026  -5.079 -12.765  1.00  0.00
ATOM    425  CG1 ILE    94      18.505  -3.932 -13.634  1.00  0.00
ATOM    426  CG2 ILE    94      20.545  -5.009 -12.734  1.00  0.00
ATOM    427  CD1 ILE    94      18.688  -2.564 -13.013  1.00  0.00
ATOM    428  O   ILE    94      20.287  -8.245 -13.032  1.00  0.00
ATOM    429  C   ILE    94      19.355  -7.588 -12.532  1.00  0.00
ATOM    430  N   MET    95      18.846  -7.930 -11.436  1.00  0.00
ATOM    431  CA  MET    95      19.289  -9.034 -10.574  1.00  0.00
ATOM    432  CB  MET    95      18.438  -9.099  -9.305  1.00  0.00
ATOM    433  CG  MET    95      18.678  -7.953  -8.337  1.00  0.00
ATOM    434  SD  MET    95      17.629  -8.048  -6.872  1.00  0.00
ATOM    435  CE  MET    95      18.322  -9.484  -6.053  1.00  0.00
ATOM    436  O   MET    95      19.914 -11.301 -11.164  1.00  0.00
ATOM    437  C   MET    95      19.143 -10.335 -11.363  1.00  0.00
ATOM    438  N   ALA    96      18.156 -10.324 -12.245  1.00  0.00
ATOM    439  CA  ALA    96      17.846 -11.465 -13.117  1.00  0.00
ATOM    440  CB  ALA    96      16.346 -11.714 -13.152  1.00  0.00
ATOM    441  O   ALA    96      17.651 -11.824 -15.505  1.00  0.00
ATOM    442  C   ALA    96      18.288 -11.293 -14.570  1.00  0.00
ATOM    443  N   SER    97      19.328 -10.596 -14.610  1.00  0.00
ATOM    444  CA  SER    97      19.856 -10.165 -15.912  1.00  0.00
ATOM    445  CB  SER    97      21.249  -9.556 -15.749  1.00  0.00
ATOM    446  OG  SER    97      22.181 -10.525 -15.302  1.00  0.00
ATOM    447  O   SER    97      20.325 -11.146 -18.077  1.00  0.00
ATOM    448  C   SER    97      19.968 -11.331 -16.894  1.00  0.00
ATOM    449  N   ASP    98      19.653 -12.507 -16.375  1.00  0.00
ATOM    450  CA  ASP    98      19.680 -13.758 -17.142  1.00  0.00
ATOM    451  CB  ASP    98      19.720 -14.964 -16.202  1.00  0.00
ATOM    452  CG  ASP    98      20.030 -16.259 -16.926  1.00  0.00
ATOM    453  OD1 ASP    98      20.416 -16.198 -18.113  1.00  0.00
ATOM    454  OD2 ASP    98      19.888 -17.334 -16.309  1.00  0.00
ATOM    455  O   ASP    98      18.390 -14.264 -19.131  1.00  0.00
ATOM    456  C   ASP    98      18.401 -13.774 -17.981  1.00  0.00
ATOM    460  N   ASP   103      17.164 -17.131  -2.535  1.00  0.00
ATOM    461  CA  ASP   103      17.121 -16.434  -1.246  1.00  0.00
ATOM    462  CB  ASP   103      16.415 -17.294  -0.196  1.00  0.00
ATOM    463  CG  ASP   103      14.917 -17.371  -0.416  1.00  0.00
ATOM    464  OD1 ASP   103      14.395 -16.578  -1.228  1.00  0.00
ATOM    465  OD2 ASP   103      14.267 -18.223   0.223  1.00  0.00
ATOM    466  O   ASP   103      18.624 -14.999  -0.025  1.00  0.00
ATOM    467  C   ASP   103      18.472 -16.069  -0.633  1.00  0.00
ATOM    468  N   ASN   104      19.433 -16.964  -0.802  1.00  0.00
ATOM    469  CA  ASN   104      20.812 -16.682  -0.376  1.00  0.00
ATOM    470  CB  ASN   104      21.715 -17.885  -0.653  1.00  0.00
ATOM    471  CG  ASN   104      21.462 -19.036   0.302  1.00  0.00
ATOM    472  ND2 ASN   104      21.879 -20.234  -0.094  1.00  0.00
ATOM    473  OD1 ASN   104      20.899 -18.849   1.379  1.00  0.00
ATOM    474  O   ASN   104      22.188 -14.725  -0.457  1.00  0.00
ATOM    475  C   ASN   104      21.482 -15.493  -1.061  1.00  0.00
ATOM    479  N   LEU   108      21.222 -15.366  -2.349  1.00  0.00
ATOM    480  CA  LEU   108      21.764 -14.239  -3.116  1.00  0.00
ATOM    481  CB  LEU   108      21.408 -14.379  -4.598  1.00  0.00
ATOM    482  CG  LEU   108      22.103 -15.511  -5.358  1.00  0.00
ATOM    483  CD1 LEU   108      21.527 -15.650  -6.758  1.00  0.00
ATOM    484  CD2 LEU   108      23.595 -15.238  -5.481  1.00  0.00
ATOM    485  O   LEU   108      21.929 -11.924  -2.475  1.00  0.00
ATOM    486  C   LEU   108      21.199 -12.917  -2.613  1.00  0.00
ATOM    487  N   TRP   109      19.906 -12.921  -2.347  1.00  0.00
ATOM    488  CA  TRP   109      19.240 -11.713  -1.844  1.00  0.00
ATOM    489  CB  TRP   109      17.728 -11.930  -1.762  1.00  0.00
ATOM    490  CG  TRP   109      16.977 -10.735  -1.262  1.00  0.00
ATOM    491  CD1 TRP   109      16.541  -9.673  -2.001  1.00  0.00
ATOM    492  CD2 TRP   109      16.573 -10.478   0.088  1.00  0.00
ATOM    493  CE2 TRP   109      15.896  -9.242   0.092  1.00  0.00
ATOM    494  CE3 TRP   109      16.717 -11.172   1.293  1.00  0.00
ATOM    495  NE1 TRP   109      15.891  -8.770  -1.196  1.00  0.00
ATOM    496  CZ2 TRP   109      15.365  -8.685   1.255  1.00  0.00
ATOM    497  CZ3 TRP   109      16.189 -10.616   2.445  1.00  0.00
ATOM    498  CH2 TRP   109      15.522  -9.386   2.420  1.00  0.00
ATOM    499  O   TRP   109      19.857 -10.102  -0.161  1.00  0.00
ATOM    500  C   TRP   109      19.706 -11.300  -0.449  1.00  0.00
ATOM    501  N   THR   110      19.923 -12.294   0.393  1.00  0.00
ATOM    502  CA  THR   110      20.427 -12.039   1.717  1.00  0.00
ATOM    503  CB  THR   110      20.577 -13.342   2.523  1.00  0.00
ATOM    504  CG2 THR   110      21.140 -13.050   3.907  1.00  0.00
ATOM    505  OG1 THR   110      19.298 -13.970   2.666  1.00  0.00
ATOM    506  O   THR   110      22.026 -10.352   2.349  1.00  0.00
ATOM    507  C   THR   110      21.800 -11.368   1.679  1.00  0.00
ATOM    508  N   LEU   111      22.696 -11.978   1.067  1.00  0.00
ATOM    509  CA  LEU   111      24.033 -11.388   0.922  1.00  0.00
ATOM    510  CB  LEU   111      24.936 -12.304   0.093  1.00  0.00
ATOM    511  CG  LEU   111      25.352 -13.621   0.748  1.00  0.00
ATOM    512  CD1 LEU   111      26.089 -14.507  -0.245  1.00  0.00
ATOM    513  CD2 LEU   111      26.273 -13.367   1.932  1.00  0.00
ATOM    514  O   LEU   111      24.940  -9.156   0.661  1.00  0.00
ATOM    515  C   LEU   111      24.141 -10.024   0.242  1.00  0.00
ATOM    516  N   ILE   112      23.327  -9.869  -0.789  1.00  0.00
ATOM    517  CA  ILE   112      23.257  -8.631  -1.579  1.00  0.00
ATOM    518  CB  ILE   112      22.203  -8.733  -2.696  1.00  0.00
ATOM    519  CG1 ILE   112      22.639  -9.753  -3.749  1.00  0.00
ATOM    520  CG2 ILE   112      22.019  -7.386  -3.378  1.00  0.00
ATOM    521  CD1 ILE   112      21.550 -10.115  -4.736  1.00  0.00
ATOM    522  O   ILE   112      23.589  -6.299  -1.013  1.00  0.00
ATOM    523  C   ILE   112      22.897  -7.329  -0.864  1.00  0.00
ATOM    524  N   SER   113      21.820  -7.414  -0.099  1.00  0.00
ATOM    525  CA  SER   113      21.301  -6.286   0.686  1.00  0.00
ATOM    526  CB  SER   113      19.870  -6.568   1.148  1.00  0.00
ATOM    527  OG  SER   113      18.998  -6.719   0.041  1.00  0.00
ATOM    528  O   SER   113      22.707  -5.063   2.237  1.00  0.00
ATOM    529  C   SER   113      22.258  -6.171   1.875  1.00  0.00
ATOM    533  N   CYS   116      25.784  -4.566   0.586  1.00  0.00
ATOM    534  CA  CYS   116      25.699  -3.230  -0.017  1.00  0.00
ATOM    535  CB  CYS   116      26.076  -3.287  -1.500  1.00  0.00
ATOM    536  SG  CYS   116      27.790  -3.763  -1.816  1.00  0.00
ATOM    537  O   CYS   116      23.260  -3.200  -0.261  1.00  0.00
ATOM    538  C   CYS   116      24.314  -2.576   0.041  1.00  0.00
TER
END



