
PFRMAT TS
TARGET T0309
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0309 model 2 Thu Jun  1 13:24:45 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  2
PARENT N/A
ATOM      1  N   MET     1      23.995  15.532  -6.924  1.00  0.00
ATOM      2  CA  MET     1      23.214  15.510  -5.650  1.00  0.00
ATOM      3  CB  MET     1      22.351  16.768  -5.529  1.00  0.00
ATOM      4  CG  MET     1      23.147  18.053  -5.375  1.00  0.00
ATOM      5  SD  MET     1      24.139  18.082  -3.870  1.00  0.00
ATOM      6  CE  MET     1      22.859  18.216  -2.624  1.00  0.00
ATOM      7  O   MET     1      22.117  13.548  -6.517  1.00  0.00
ATOM      8  C   MET     1      22.280  14.304  -5.558  1.00  0.00
ATOM      9  N   ALA     2      -4.927   1.459  13.506  1.00  0.00
ATOM     10  CA  ALA     2      -5.328   1.046  14.847  1.00  0.00
ATOM     11  CB  ALA     2      -5.670  -0.434  14.865  1.00  0.00
ATOM     12  O   ALA     2      -4.414   0.887  17.054  1.00  0.00
ATOM     13  C   ALA     2      -4.242   1.268  15.893  1.00  0.00
ATOM     14  N   SER     3      -3.130   1.879  15.490  1.00  0.00
ATOM     15  CA  SER     3      -2.024   2.138  16.412  1.00  0.00
ATOM     16  CB  SER     3      -1.152   0.890  16.568  1.00  0.00
ATOM     17  OG  SER     3      -0.067   1.132  17.446  1.00  0.00
ATOM     18  O   SER     3      -0.267   3.070  15.091  1.00  0.00
ATOM     19  C   SER     3      -1.108   3.265  15.955  1.00  0.00
ATOM     20  N   LYS     4      -1.267   4.445  16.540  1.00  0.00
ATOM     21  CA  LYS     4      -0.428   5.577  16.180  1.00  0.00
ATOM     22  CB  LYS     4      -0.885   6.839  16.913  1.00  0.00
ATOM     23  CG  LYS     4      -2.237   7.365  16.456  1.00  0.00
ATOM     24  CD  LYS     4      -2.643   8.600  17.244  1.00  0.00
ATOM     25  CE  LYS     4      -3.975   9.149  16.762  1.00  0.00
ATOM     26  NZ  LYS     4      -4.401  10.344  17.544  1.00  0.00
ATOM     27  O   LYS     4       1.935   5.883  15.991  1.00  0.00
ATOM     28  C   LYS     4       1.017   5.296  16.554  1.00  0.00
ATOM     29  N   LYS     5       1.199   4.392  17.513  1.00  0.00
ATOM     30  CA  LYS     5       2.514   3.990  17.983  1.00  0.00
ATOM     31  CB  LYS     5       2.396   3.166  19.267  1.00  0.00
ATOM     32  CG  LYS     5       3.731   2.741  19.857  1.00  0.00
ATOM     33  CD  LYS     5       3.543   2.002  21.173  1.00  0.00
ATOM     34  CE  LYS     5       4.876   1.548  21.745  1.00  0.00
ATOM     35  NZ  LYS     5       4.704   0.774  23.006  1.00  0.00
ATOM     36  O   LYS     5       4.336   3.427  16.529  1.00  0.00
ATOM     37  C   LYS     5       3.210   3.142  16.923  1.00  0.00
ATOM     38  N   VAL     6       2.534   2.090  16.474  1.00  0.00
ATOM     39  CA  VAL     6       3.114   1.211  15.476  1.00  0.00
ATOM     40  CB  VAL     6       2.190   0.018  15.169  1.00  0.00
ATOM     41  CG1 VAL     6       2.719  -0.777  13.985  1.00  0.00
ATOM     42  CG2 VAL     6       2.101  -0.911  16.371  1.00  0.00
ATOM     43  O   VAL     6       4.353   1.727  13.493  1.00  0.00
ATOM     44  C   VAL     6       3.354   1.963  14.173  1.00  0.00
ATOM     45  N   HIS     7       2.452   2.884  13.847  1.00  0.00
ATOM     46  CA  HIS     7       2.576   3.674  12.637  1.00  0.00
ATOM     47  CB  HIS     7       1.314   4.509  12.412  1.00  0.00
ATOM     48  CG  HIS     7       1.349   5.330  11.160  1.00  0.00
ATOM     49  CD2 HIS     7       1.441   6.752  10.853  1.00  0.00
ATOM     50  ND1 HIS     7       1.290   4.773   9.901  1.00  0.00
ATOM     51  CE1 HIS     7       1.342   5.756   8.984  1.00  0.00
ATOM     52  NE2 HIS     7       1.433   6.945   9.548  1.00  0.00
ATOM     53  O   HIS     7       4.506   4.799  11.770  1.00  0.00
ATOM     54  C   HIS     7       3.767   4.620  12.736  1.00  0.00
ATOM     55  N   GLN     8       3.961   5.223  13.902  1.00  0.00
ATOM     56  CA  GLN     8       5.087   6.139  14.083  1.00  0.00
ATOM     57  CB  GLN     8       5.013   6.815  15.454  1.00  0.00
ATOM     58  CG  GLN     8       6.077   7.876  15.682  1.00  0.00
ATOM     59  CD  GLN     8       5.958   9.036  14.713  1.00  0.00
ATOM     60  OE1 GLN     8       4.865   9.549  14.474  1.00  0.00
ATOM     61  NE2 GLN     8       7.086   9.454  14.151  1.00  0.00
ATOM     62  O   GLN     8       7.381   5.840  13.463  1.00  0.00
ATOM     63  C   GLN     8       6.383   5.343  13.980  1.00  0.00
ATOM     64  N   ILE     9       6.358   4.103  14.467  1.00  0.00
ATOM     65  CA  ILE     9       7.530   3.231  14.408  1.00  0.00
ATOM     66  CB  ILE     9       7.255   1.871  15.073  1.00  0.00
ATOM     67  CG1 ILE     9       7.069   2.044  16.582  1.00  0.00
ATOM     68  CG2 ILE     9       8.419   0.917  14.839  1.00  0.00
ATOM     69  CD1 ILE     9       6.532   0.810  17.276  1.00  0.00
ATOM     70  O   ILE     9       9.042   3.166  12.531  1.00  0.00
ATOM     71  C   ILE     9       7.891   3.001  12.941  1.00  0.00
ATOM     72  N   ASN    10       6.889   2.616  12.158  1.00  0.00
ATOM     73  CA  ASN    10       7.079   2.382  10.733  1.00  0.00
ATOM     74  CB  ASN    10       5.734   2.131  10.047  1.00  0.00
ATOM     75  CG  ASN    10       5.157   0.767  10.376  1.00  0.00
ATOM     76  ND2 ASN    10       3.871   0.589  10.101  1.00  0.00
ATOM     77  OD1 ASN    10       5.861  -0.112  10.872  1.00  0.00
ATOM     78  O   ASN    10       8.668   3.409   9.246  1.00  0.00
ATOM     79  C   ASN    10       7.740   3.582  10.043  1.00  0.00
ATOM     80  N   VAL    11       7.290   4.796  10.363  1.00  0.00
ATOM     81  CA  VAL    11       7.876   5.989   9.754  1.00  0.00
ATOM     82  CB  VAL    11       7.023   7.242  10.030  1.00  0.00
ATOM     83  CG1 VAL    11       7.741   8.492   9.547  1.00  0.00
ATOM     84  CG2 VAL    11       5.686   7.146   9.310  1.00  0.00
ATOM     85  O   VAL    11      10.101   6.883   9.612  1.00  0.00
ATOM     86  C   VAL    11       9.274   6.271  10.289  1.00  0.00
ATOM     87  N   LYS    12       9.531   5.817  11.509  1.00  0.00
ATOM     88  CA  LYS    12      10.841   5.981  12.125  1.00  0.00
ATOM     89  CB  LYS    12      10.799   5.557  13.594  1.00  0.00
ATOM     90  CG  LYS    12      12.115   5.742  14.332  1.00  0.00
ATOM     91  CD  LYS    12      11.980   5.383  15.802  1.00  0.00
ATOM     92  CE  LYS    12      13.305   5.535  16.532  1.00  0.00
ATOM     93  NZ  LYS    12      13.200   5.134  17.963  1.00  0.00
ATOM     94  O   LYS    12      12.897   5.536  10.939  1.00  0.00
ATOM     95  C   LYS    12      11.820   5.093  11.345  1.00  0.00
ATOM     96  N   GLY    13      11.426   3.842  11.140  1.00  0.00
ATOM     97  CA  GLY    13      12.230   2.880  10.402  1.00  0.00
ATOM     98  O   GLY    13      13.522   3.247   8.410  1.00  0.00
ATOM     99  C   GLY    13      12.428   3.333   8.953  1.00  0.00
ATOM    100  N   PHE    14      11.372   3.835   8.334  1.00  0.00
ATOM    101  CA  PHE    14      11.477   4.323   6.966  1.00  0.00
ATOM    102  CB  PHE    14      10.117   4.818   6.468  1.00  0.00
ATOM    103  CG  PHE    14      10.148   5.377   5.075  1.00  0.00
ATOM    104  CD1 PHE    14      10.151   4.536   3.976  1.00  0.00
ATOM    105  CD2 PHE    14      10.175   6.744   4.863  1.00  0.00
ATOM    106  CE1 PHE    14      10.181   5.050   2.693  1.00  0.00
ATOM    107  CE2 PHE    14      10.204   7.259   3.581  1.00  0.00
ATOM    108  CZ  PHE    14      10.207   6.419   2.498  1.00  0.00
ATOM    109  O   PHE    14      13.337   5.499   6.043  1.00  0.00
ATOM    110  C   PHE    14      12.471   5.478   6.906  1.00  0.00
ATOM    111  N   PHE    15      12.336   6.428   7.830  1.00  0.00
ATOM    112  CA  PHE    15      13.201   7.602   7.889  1.00  0.00
ATOM    113  CB  PHE    15      12.803   8.503   9.061  1.00  0.00
ATOM    114  CG  PHE    15      13.673   9.716   9.216  1.00  0.00
ATOM    115  CD1 PHE    15      13.490  10.825   8.408  1.00  0.00
ATOM    116  CD2 PHE    15      14.679   9.749  10.168  1.00  0.00
ATOM    117  CE1 PHE    15      14.291  11.943   8.551  1.00  0.00
ATOM    118  CE2 PHE    15      15.480  10.865  10.310  1.00  0.00
ATOM    119  CZ  PHE    15      15.289  11.960   9.507  1.00  0.00
ATOM    120  O   PHE    15      15.510   7.792   7.374  1.00  0.00
ATOM    121  C   PHE    15      14.670   7.251   8.073  1.00  0.00
ATOM    122  N   ASP    16      14.983   6.366   9.018  1.00  0.00
ATOM    123  CA  ASP    16      16.375   5.984   9.260  1.00  0.00
ATOM    124  CB  ASP    16      16.472   5.057  10.475  1.00  0.00
ATOM    125  CG  ASP    16      16.259   5.790  11.785  1.00  0.00
ATOM    126  OD1 ASP    16      16.279   7.038  11.777  1.00  0.00
ATOM    127  OD2 ASP    16      16.070   5.115  12.819  1.00  0.00
ATOM    128  O   ASP    16      18.157   5.388   7.789  1.00  0.00
ATOM    129  C   ASP    16      16.975   5.250   8.065  1.00  0.00
ATOM    130  N   MET    17      16.162   4.474   7.356  1.00  0.00
ATOM    131  CA  MET    17      16.659   3.768   6.187  1.00  0.00
ATOM    132  CB  MET    17      15.637   2.731   5.715  1.00  0.00
ATOM    133  CG  MET    17      15.468   1.552   6.658  1.00  0.00
ATOM    134  SD  MET    17      16.993   0.619   6.887  1.00  0.00
ATOM    135  CE  MET    17      17.192  -0.111   5.265  1.00  0.00
ATOM    136  O   MET    17      17.901   4.677   4.347  1.00  0.00
ATOM    137  C   MET    17      16.908   4.776   5.064  1.00  0.00
ATOM    138  N   ASP    18      16.014   5.755   4.925  1.00  0.00
ATOM    139  CA  ASP    18      16.146   6.770   3.879  1.00  0.00
ATOM    140  CB  ASP    18      14.950   7.723   3.902  1.00  0.00
ATOM    141  CG  ASP    18      15.004   8.753   2.790  1.00  0.00
ATOM    142  OD1 ASP    18      14.992   8.351   1.608  1.00  0.00
ATOM    143  OD2 ASP    18      15.059   9.961   3.102  1.00  0.00
ATOM    144  O   ASP    18      18.173   7.831   3.136  1.00  0.00
ATOM    145  C   ASP    18      17.421   7.594   4.079  1.00  0.00
ATOM    146  N   VAL    19      17.672   8.024   5.307  1.00  0.00
ATOM    147  CA  VAL    19      18.870   8.800   5.582  1.00  0.00
ATOM    148  CB  VAL    19      18.974   9.164   7.076  1.00  0.00
ATOM    149  CG1 VAL    19      20.323   9.798   7.375  1.00  0.00
ATOM    150  CG2 VAL    19      17.882  10.150   7.460  1.00  0.00
ATOM    151  O   VAL    19      20.995   8.523   4.483  1.00  0.00
ATOM    152  C   VAL    19      20.134   8.016   5.207  1.00  0.00
ATOM    153  N   MET    20      20.233   6.776   5.681  1.00  0.00
ATOM    154  CA  MET    20      21.382   5.938   5.370  1.00  0.00
ATOM    155  CB  MET    20      21.201   4.538   5.962  1.00  0.00
ATOM    156  CG  MET    20      21.271   4.492   7.478  1.00  0.00
ATOM    157  SD  MET    20      20.921   2.852   8.142  1.00  0.00
ATOM    158  CE  MET    20      22.362   1.947   7.583  1.00  0.00
ATOM    159  O   MET    20      22.724   5.918   3.365  1.00  0.00
ATOM    160  C   MET    20      21.598   5.772   3.852  1.00  0.00
ATOM    161  N   GLU    21      20.535   5.483   3.105  1.00  0.00
ATOM    162  CA  GLU    21      20.650   5.311   1.648  1.00  0.00
ATOM    163  CB  GLU    21      19.299   4.915   1.048  1.00  0.00
ATOM    164  CG  GLU    21      18.853   3.504   1.397  1.00  0.00
ATOM    165  CD  GLU    21      17.459   3.192   0.889  1.00  0.00
ATOM    166  OE1 GLU    21      16.813   4.102   0.331  1.00  0.00
ATOM    167  OE2 GLU    21      17.014   2.036   1.051  1.00  0.00
ATOM    168  O   GLU    21      21.906   6.548   0.018  1.00  0.00
ATOM    169  C   GLU    21      21.109   6.597   0.944  1.00  0.00
ATOM    170  N   VAL    22      20.590   7.743   1.376  1.00  0.00
ATOM    171  CA  VAL    22      20.982   9.015   0.781  1.00  0.00
ATOM    172  CB  VAL    22      20.138  10.180   1.330  1.00  0.00
ATOM    173  CG1 VAL    22      20.686  11.512   0.841  1.00  0.00
ATOM    174  CG2 VAL    22      18.694  10.055   0.871  1.00  0.00
ATOM    175  O   VAL    22      23.217   9.668   0.187  1.00  0.00
ATOM    176  C   VAL    22      22.454   9.311   1.085  1.00  0.00
ATOM    177  N   THR    23      22.852   9.159   2.346  1.00  0.00
ATOM    178  CA  THR    23      24.242   9.401   2.754  1.00  0.00
ATOM    179  CB  THR    23      24.436   9.168   4.264  1.00  0.00
ATOM    180  CG2 THR    23      25.890   9.385   4.654  1.00  0.00
ATOM    181  OG1 THR    23      23.616  10.082   5.002  1.00  0.00
ATOM    182  O   THR    23      26.334   8.833   1.766  1.00  0.00
ATOM    183  C   THR    23      25.186   8.476   2.020  1.00  0.00
ATOM    184  N   GLU    24      24.688   7.291   1.678  1.00  0.00
ATOM    185  CA  GLU    24      25.468   6.290   0.960  1.00  0.00
ATOM    186  CB  GLU    24      24.859   4.900   1.147  1.00  0.00
ATOM    187  CG  GLU    24      24.909   4.387   2.577  1.00  0.00
ATOM    188  CD  GLU    24      24.233   3.038   2.737  1.00  0.00
ATOM    189  OE1 GLU    24      23.713   2.512   1.730  1.00  0.00
ATOM    190  OE2 GLU    24      24.223   2.509   3.868  1.00  0.00
ATOM    191  O   GLU    24      25.953   5.755  -1.329  1.00  0.00
ATOM    192  C   GLU    24      25.513   6.590  -0.542  1.00  0.00
ATOM    193  N   GLN    25      25.043   7.775  -0.928  1.00  0.00
ATOM    194  CA  GLN    25      25.047   8.217  -2.320  1.00  0.00
ATOM    195  CB  GLN    25      26.402   7.927  -2.970  1.00  0.00
ATOM    196  CG  GLN    25      27.572   8.639  -2.311  1.00  0.00
ATOM    197  CD  GLN    25      28.886   8.377  -3.016  1.00  0.00
ATOM    198  OE1 GLN    25      28.955   7.566  -3.942  1.00  0.00
ATOM    199  NE2 GLN    25      29.938   9.063  -2.581  1.00  0.00
ATOM    200  O   GLN    25      24.166   7.444  -4.410  1.00  0.00
ATOM    201  C   GLN    25      23.995   7.542  -3.195  1.00  0.00
ATOM    202  N   THR    26      22.904   7.086  -2.585  1.00  0.00
ATOM    203  CA  THR    26      21.819   6.444  -3.325  1.00  0.00
ATOM    204  CB  THR    26      21.407   5.109  -2.677  1.00  0.00
ATOM    205  CG2 THR    26      20.318   4.433  -3.495  1.00  0.00
ATOM    206  OG1 THR    26      22.542   4.237  -2.608  1.00  0.00
ATOM    207  O   THR    26      20.280   8.019  -2.392  1.00  0.00
ATOM    208  C   THR    26      20.587   7.335  -3.367  1.00  0.00
ATOM    212  N   TYR    33     -15.166  -1.383  -1.885  1.00  0.00
ATOM    213  CA  TYR    33     -15.580  -0.027  -1.518  1.00  0.00
ATOM    214  CB  TYR    33     -16.803  -0.070  -0.601  1.00  0.00
ATOM    215  CG  TYR    33     -17.279   1.292  -0.149  1.00  0.00
ATOM    216  CD1 TYR    33     -18.024   2.102  -0.998  1.00  0.00
ATOM    217  CD2 TYR    33     -16.983   1.765   1.122  1.00  0.00
ATOM    218  CE1 TYR    33     -18.464   3.349  -0.595  1.00  0.00
ATOM    219  CE2 TYR    33     -17.414   3.010   1.542  1.00  0.00
ATOM    220  CZ  TYR    33     -18.160   3.801   0.671  1.00  0.00
ATOM    221  OH  TYR    33     -18.596   5.041   1.075  1.00  0.00
ATOM    222  O   TYR    33     -14.282   1.909  -0.941  1.00  0.00
ATOM    223  C   TYR    33     -14.457   0.702  -0.784  1.00  0.00
ATOM    224  N   ASP    34     -13.709  -0.055   0.019  1.00  0.00
ATOM    225  CA  ASP    34     -12.592   0.453   0.815  1.00  0.00
ATOM    226  CB  ASP    34     -11.866  -0.697   1.516  1.00  0.00
ATOM    227  CG  ASP    34     -12.686  -1.306   2.637  1.00  0.00
ATOM    228  OD1 ASP    34     -13.723  -0.715   3.004  1.00  0.00
ATOM    229  OD2 ASP    34     -12.289  -2.373   3.149  1.00  0.00
ATOM    230  O   ASP    34     -10.826   2.046   0.483  1.00  0.00
ATOM    231  C   ASP    34     -11.557   1.197  -0.030  1.00  0.00
ATOM    232  N   PHE    35     -11.492   0.882  -1.317  1.00  0.00
ATOM    233  CA  PHE    35     -10.540   1.549  -2.197  1.00  0.00
ATOM    234  CB  PHE    35     -10.585   0.939  -3.598  1.00  0.00
ATOM    235  CG  PHE    35      -9.952  -0.421  -3.689  1.00  0.00
ATOM    236  CD1 PHE    35     -10.733  -1.564  -3.688  1.00  0.00
ATOM    237  CD2 PHE    35      -8.578  -0.556  -3.774  1.00  0.00
ATOM    238  CE1 PHE    35     -10.150  -2.815  -3.769  1.00  0.00
ATOM    239  CE2 PHE    35      -7.997  -1.807  -3.857  1.00  0.00
ATOM    240  CZ  PHE    35      -8.776  -2.934  -3.854  1.00  0.00
ATOM    241  O   PHE    35     -10.073   3.803  -2.881  1.00  0.00
ATOM    242  C   PHE    35     -10.855   3.037  -2.315  1.00  0.00
ATOM    243  N   LYS    36     -12.002   3.440  -1.776  1.00  0.00
ATOM    244  CA  LYS    36     -12.419   4.837  -1.816  1.00  0.00
ATOM    245  CB  LYS    36     -13.932   4.940  -2.025  1.00  0.00
ATOM    246  CG  LYS    36     -14.415   4.371  -3.349  1.00  0.00
ATOM    247  CD  LYS    36     -15.912   4.569  -3.522  1.00  0.00
ATOM    248  CE  LYS    36     -16.387   4.046  -4.867  1.00  0.00
ATOM    249  NZ  LYS    36     -17.860   4.198  -5.034  1.00  0.00
ATOM    250  O   LYS    36     -11.992   6.792  -0.497  1.00  0.00
ATOM    251  C   LYS    36     -12.079   5.566  -0.523  1.00  0.00
ATOM    252  N   GLU    37     -11.885   4.807   0.549  1.00  0.00
ATOM    253  CA  GLU    37     -11.570   5.394   1.844  1.00  0.00
ATOM    254  CB  GLU    37     -11.329   4.298   2.884  1.00  0.00
ATOM    255  CG  GLU    37     -11.039   4.822   4.282  1.00  0.00
ATOM    256  CD  GLU    37     -10.840   3.709   5.292  1.00  0.00
ATOM    257  OE1 GLU    37     -10.942   2.528   4.902  1.00  0.00
ATOM    258  OE2 GLU    37     -10.581   4.019   6.474  1.00  0.00
ATOM    259  O   GLU    37     -10.300   7.374   2.273  1.00  0.00
ATOM    260  C   GLU    37     -10.320   6.255   1.765  1.00  0.00
ATOM    261  N   ILE    38      -9.277   5.732   1.128  1.00  0.00
ATOM    262  CA  ILE    38      -8.038   6.475   0.976  1.00  0.00
ATOM    263  CB  ILE    38      -6.897   5.575   0.468  1.00  0.00
ATOM    264  CG1 ILE    38      -6.509   4.552   1.536  1.00  0.00
ATOM    265  CG2 ILE    38      -5.671   6.408   0.130  1.00  0.00
ATOM    266  CD1 ILE    38      -5.583   3.465   1.035  1.00  0.00
ATOM    267  O   ILE    38      -7.534   8.640   0.072  1.00  0.00
ATOM    268  C   ILE    38      -8.210   7.618  -0.023  1.00  0.00
ATOM    269  N   LEU    39      -9.119   7.450  -0.977  1.00  0.00
ATOM    270  CA  LEU    39      -9.359   8.482  -1.978  1.00  0.00
ATOM    271  CB  LEU    39     -10.430   8.029  -2.971  1.00  0.00
ATOM    272  CG  LEU    39     -10.826   9.037  -4.051  1.00  0.00
ATOM    273  CD1 LEU    39      -9.640   9.359  -4.947  1.00  0.00
ATOM    274  CD2 LEU    39     -11.944   8.484  -4.920  1.00  0.00
ATOM    275  O   LEU    39      -9.236  10.839  -1.560  1.00  0.00
ATOM    276  C   LEU    39      -9.835   9.788  -1.350  1.00  0.00
ATOM    277  N   SER    40     -10.920   9.715  -0.585  1.00  0.00
ATOM    278  CA  SER    40     -11.466  10.892   0.070  1.00  0.00
ATOM    279  CB  SER    40     -12.781  10.552   0.774  1.00  0.00
ATOM    280  OG  SER    40     -12.564   9.660   1.854  1.00  0.00
ATOM    281  O   SER    40     -10.668  12.633   1.505  1.00  0.00
ATOM    282  C   SER    40     -10.526  11.473   1.123  1.00  0.00
ATOM    283  N   GLU    41      -9.572  10.679   1.602  1.00  0.00
ATOM    284  CA  GLU    41      -8.623  11.179   2.594  1.00  0.00
ATOM    285  CB  GLU    41      -7.786  10.030   3.163  1.00  0.00
ATOM    286  CG  GLU    41      -8.567   9.075   4.051  1.00  0.00
ATOM    287  CD  GLU    41      -7.744   7.875   4.478  1.00  0.00
ATOM    288  OE1 GLU    41      -6.588   7.754   4.023  1.00  0.00
ATOM    289  OE2 GLU    41      -8.257   7.055   5.269  1.00  0.00
ATOM    290  O   GLU    41      -7.470  13.285   2.503  1.00  0.00
ATOM    291  C   GLU    41      -7.678  12.200   1.962  1.00  0.00
ATOM    292  N   PHE    42      -7.120  11.850   0.807  1.00  0.00
ATOM    293  CA  PHE    42      -6.213  12.744   0.093  1.00  0.00
ATOM    294  CB  PHE    42      -5.708  12.081  -1.190  1.00  0.00
ATOM    295  CG  PHE    42      -4.772  12.942  -1.988  1.00  0.00
ATOM    296  CD1 PHE    42      -3.444  13.071  -1.622  1.00  0.00
ATOM    297  CD2 PHE    42      -5.219  13.626  -3.106  1.00  0.00
ATOM    298  CE1 PHE    42      -2.582  13.863  -2.357  1.00  0.00
ATOM    299  CE2 PHE    42      -4.358  14.419  -3.840  1.00  0.00
ATOM    300  CZ  PHE    42      -3.044  14.539  -3.470  1.00  0.00
ATOM    301  O   PHE    42      -6.307  15.122  -0.210  1.00  0.00
ATOM    302  C   PHE    42      -6.901  14.046  -0.291  1.00  0.00
ATOM    303  N   ASN    43      -8.158  13.944  -0.710  1.00  0.00
ATOM    304  CA  ASN    43      -8.926  15.116  -1.103  1.00  0.00
ATOM    305  CB  ASN    43     -10.293  14.701  -1.651  1.00  0.00
ATOM    306  CG  ASN    43     -10.202  14.071  -3.027  1.00  0.00
ATOM    307  ND2 ASN    43     -11.240  13.334  -3.408  1.00  0.00
ATOM    308  OD1 ASN    43      -9.212  14.245  -3.736  1.00  0.00
ATOM    309  O   ASN    43      -8.840  17.243  -0.006  1.00  0.00
ATOM    310  C   ASN    43      -9.163  16.061   0.071  1.00  0.00
ATOM    311  N   GLY    44      -9.726  15.534   1.154  1.00  0.00
ATOM    312  CA  GLY    44     -10.022  16.332   2.340  1.00  0.00
ATOM    313  O   GLY    44      -8.881  17.980   3.644  1.00  0.00
ATOM    314  C   GLY    44      -8.784  16.964   2.956  1.00  0.00
ATOM    315  N   LYS    45      -7.622  16.368   2.713  1.00  0.00
ATOM    316  CA  LYS    45      -6.389  16.906   3.269  1.00  0.00
ATOM    317  CB  LYS    45      -5.231  15.932   3.047  1.00  0.00
ATOM    318  CG  LYS    45      -5.359  14.627   3.816  1.00  0.00
ATOM    319  CD  LYS    45      -4.143  13.740   3.606  1.00  0.00
ATOM    320  CE  LYS    45      -4.282  12.427   4.357  1.00  0.00
ATOM    321  NZ  LYS    45      -3.110  11.534   4.137  1.00  0.00
ATOM    322  O   LYS    45      -4.993  18.836   3.027  1.00  0.00
ATOM    323  C   LYS    45      -5.993  18.235   2.638  1.00  0.00
ATOM    324  N   ASN    46       3.272   3.389 -21.667  1.00  0.00
ATOM    325  CA  ASN    46       4.015   4.643 -21.645  1.00  0.00
ATOM    326  CB  ASN    46       3.082   5.823 -21.931  1.00  0.00
ATOM    327  CG  ASN    46       2.145   6.116 -20.777  1.00  0.00
ATOM    328  ND2 ASN    46       1.337   7.161 -20.924  1.00  0.00
ATOM    329  OD1 ASN    46       2.148   5.414 -19.766  1.00  0.00
ATOM    330  O   ASN    46       5.087   5.928 -19.905  1.00  0.00
ATOM    331  C   ASN    46       4.647   4.829 -20.268  1.00  0.00
ATOM    332  N   VAL    47       4.699   3.735 -19.513  1.00  0.00
ATOM    333  CA  VAL    47       5.271   3.741 -18.173  1.00  0.00
ATOM    334  CB  VAL    47       5.485   2.309 -17.647  1.00  0.00
ATOM    335  CG1 VAL    47       6.272   2.333 -16.345  1.00  0.00
ATOM    336  CG2 VAL    47       4.148   1.631 -17.387  1.00  0.00
ATOM    337  O   VAL    47       6.867   5.205 -17.161  1.00  0.00
ATOM    338  C   VAL    47       6.631   4.434 -18.089  1.00  0.00
ATOM    339  N   SER    48       7.523   4.174 -19.044  1.00  0.00
ATOM    340  CA  SER    48       8.842   4.815 -19.017  1.00  0.00
ATOM    341  CB  SER    48       9.730   4.261 -20.133  1.00  0.00
ATOM    342  OG  SER    48       9.222   4.611 -21.409  1.00  0.00
ATOM    343  O   SER    48       9.651   7.048 -18.702  1.00  0.00
ATOM    344  C   SER    48       8.789   6.331 -19.205  1.00  0.00
ATOM    345  N   ILE    49       7.782   6.827 -19.919  1.00  0.00
ATOM    346  CA  ILE    49       7.663   8.267 -20.113  1.00  0.00
ATOM    347  CB  ILE    49       6.649   8.606 -21.221  1.00  0.00
ATOM    348  CG1 ILE    49       7.172   8.147 -22.582  1.00  0.00
ATOM    349  CG2 ILE    49       6.406  10.107 -21.279  1.00  0.00
ATOM    350  CD1 ILE    49       6.136   8.199 -23.684  1.00  0.00
ATOM    351  O   ILE    49       7.707   9.952 -18.408  1.00  0.00
ATOM    352  C   ILE    49       7.196   8.907 -18.813  1.00  0.00
ATOM    353  N   THR    50       6.217   8.274 -18.171  1.00  0.00
ATOM    354  CA  THR    50       5.672   8.748 -16.902  1.00  0.00
ATOM    355  CB  THR    50       4.626   7.770 -16.336  1.00  0.00
ATOM    356  CG2 THR    50       4.104   8.265 -14.997  1.00  0.00
ATOM    357  OG1 THR    50       3.527   7.660 -17.250  1.00  0.00
ATOM    358  O   THR    50       6.912   9.958 -15.240  1.00  0.00
ATOM    359  C   THR    50       6.776   8.903 -15.856  1.00  0.00
ATOM    360  N   VAL    51       7.560   7.848 -15.657  1.00  0.00
ATOM    361  CA  VAL    51       8.636   7.894 -14.676  1.00  0.00
ATOM    362  CB  VAL    51       9.294   6.514 -14.496  1.00  0.00
ATOM    363  CG1 VAL    51       8.268   5.490 -14.034  1.00  0.00
ATOM    364  CG2 VAL    51       9.895   6.033 -15.810  1.00  0.00
ATOM    365  O   VAL    51      10.481   9.384 -14.287  1.00  0.00
ATOM    366  C   VAL    51       9.725   8.875 -15.110  1.00  0.00
ATOM    367  N   LYS    52       9.797   9.133 -16.411  1.00  0.00
ATOM    368  CA  LYS    52      10.778  10.055 -16.963  1.00  0.00
ATOM    369  CB  LYS    52      10.867   9.896 -18.482  1.00  0.00
ATOM    370  CG  LYS    52      11.915  10.779 -19.138  1.00  0.00
ATOM    371  CD  LYS    52      12.015  10.504 -20.631  1.00  0.00
ATOM    372  CE  LYS    52      13.046  11.404 -21.289  1.00  0.00
ATOM    373  NZ  LYS    52      13.139  11.161 -22.757  1.00  0.00
ATOM    374  O   LYS    52      11.150  12.346 -16.344  1.00  0.00
ATOM    375  C   LYS    52      10.333  11.470 -16.616  1.00  0.00
ATOM    376  N   GLU    53       9.024  11.682 -16.621  1.00  0.00
ATOM    377  CA  GLU    53       8.480  12.990 -16.316  1.00  0.00
ATOM    378  CB  GLU    53       6.988  13.041 -16.649  1.00  0.00
ATOM    379  CG  GLU    53       6.681  12.967 -18.135  1.00  0.00
ATOM    380  CD  GLU    53       5.193  13.020 -18.426  1.00  0.00
ATOM    381  OE1 GLU    53       4.406  13.163 -17.467  1.00  0.00
ATOM    382  OE2 GLU    53       4.816  12.917 -19.612  1.00  0.00
ATOM    383  O   GLU    53       9.266  14.364 -14.517  1.00  0.00
ATOM    384  C   GLU    53       8.626  13.364 -14.852  1.00  0.00
ATOM    385  N   GLU    54       8.030  12.559 -13.978  1.00  0.00
ATOM    386  CA  GLU    54       8.081  12.815 -12.543  1.00  0.00
ATOM    387  CB  GLU    54       7.284  11.755 -11.781  1.00  0.00
ATOM    388  CG  GLU    54       7.882  10.359 -11.850  1.00  0.00
ATOM    389  CD  GLU    54       7.043   9.329 -11.118  1.00  0.00
ATOM    390  OE1 GLU    54       5.975   9.701 -10.587  1.00  0.00
ATOM    391  OE2 GLU    54       7.455   8.151 -11.076  1.00  0.00
ATOM    392  O   GLU    54       9.732  13.171 -10.848  1.00  0.00
ATOM    393  C   GLU    54       9.500  12.795 -11.995  1.00  0.00
ATOM    394  N   ASN    55      10.456  12.378 -12.816  1.00  0.00
ATOM    395  CA  ASN    55      11.843  12.340 -12.372  1.00  0.00
ATOM    396  CB  ASN    55      12.643  11.336 -13.204  1.00  0.00
ATOM    397  CG  ASN    55      14.042  11.114 -12.662  1.00  0.00
ATOM    398  ND2 ASN    55      15.046  11.423 -13.475  1.00  0.00
ATOM    399  OD1 ASN    55      14.215  10.671 -11.527  1.00  0.00
ATOM    400  O   ASN    55      13.389  14.060 -11.748  1.00  0.00
ATOM    401  C   ASN    55      12.498  13.706 -12.515  1.00  0.00
ATOM    402  N   GLU    56      12.041  14.476 -13.495  1.00  0.00
ATOM    403  CA  GLU    56      12.614  15.789 -13.750  1.00  0.00
ATOM    404  CB  GLU    56      13.189  15.855 -15.166  1.00  0.00
ATOM    405  CG  GLU    56      14.365  14.923 -15.402  1.00  0.00
ATOM    406  CD  GLU    56      14.884  14.987 -16.826  1.00  0.00
ATOM    407  OE1 GLU    56      14.323  15.763 -17.628  1.00  0.00
ATOM    408  OE2 GLU    56      15.853  14.263 -17.138  1.00  0.00
ATOM    409  O   GLU    56      12.005  18.085 -13.418  1.00  0.00
ATOM    410  C   GLU    56      11.616  16.934 -13.632  1.00  0.00
ATOM    411  N   LEU    57      10.331  16.621 -13.768  1.00  0.00
ATOM    412  CA  LEU    57       9.304  17.648 -13.677  1.00  0.00
ATOM    413  CB  LEU    57       7.910  17.019 -13.734  1.00  0.00
ATOM    414  CG  LEU    57       6.729  17.992 -13.764  1.00  0.00
ATOM    415  CD1 LEU    57       6.745  18.817 -15.040  1.00  0.00
ATOM    416  CD2 LEU    57       5.410  17.237 -13.702  1.00  0.00
ATOM    417  O   LEU    57       9.473  17.792 -11.285  1.00  0.00
ATOM    418  C   LEU    57       9.466  18.397 -12.353  1.00  0.00
ATOM    419  N   PRO    58       9.602  19.728 -12.411  1.00  0.00
ATOM    420  CA  PRO    58       9.774  20.552 -11.210  1.00  0.00
ATOM    421  CB  PRO    58      10.248  21.902 -11.753  1.00  0.00
ATOM    422  CG  PRO    58       9.729  21.946 -13.152  1.00  0.00
ATOM    423  CD  PRO    58       9.784  20.534 -13.660  1.00  0.00
ATOM    424  O   PRO    58       8.632  21.142  -9.195  1.00  0.00
ATOM    425  C   PRO    58       8.528  20.764 -10.359  1.00  0.00
ATOM    426  N   VAL    59       7.356  20.515 -10.931  1.00  0.00
ATOM    427  CA  VAL    59       6.106  20.701 -10.201  1.00  0.00
ATOM    428  CB  VAL    59       4.889  20.301 -11.054  1.00  0.00
ATOM    429  CG1 VAL    59       3.621  20.314 -10.213  1.00  0.00
ATOM    430  CG2 VAL    59       4.707  21.270 -12.211  1.00  0.00
ATOM    431  O   VAL    59       5.416  20.247  -7.946  1.00  0.00
ATOM    432  C   VAL    59       6.055  19.859  -8.922  1.00  0.00
ATOM    433  N   LYS    60       6.724  18.712  -8.930  1.00  0.00
ATOM    434  CA  LYS    60       6.724  17.837  -7.761  1.00  0.00
ATOM    435  CB  LYS    60       6.839  16.372  -8.189  1.00  0.00
ATOM    436  CG  LYS    60       5.650  15.865  -8.989  1.00  0.00
ATOM    437  CD  LYS    60       5.832  14.408  -9.383  1.00  0.00
ATOM    438  CE  LYS    60       4.669  13.916 -10.229  1.00  0.00
ATOM    439  NZ  LYS    60       4.820  12.482 -10.601  1.00  0.00
ATOM    440  O   LYS    60       7.992  17.560  -5.746  1.00  0.00
ATOM    441  C   LYS    60       7.890  18.141  -6.827  1.00  0.00
ATOM    442  N   GLY    61       8.757  19.061  -7.239  1.00  0.00
ATOM    443  CA  GLY    61       9.938  19.416  -6.460  1.00  0.00
ATOM    444  O   GLY    61      10.517  20.278  -4.295  1.00  0.00
ATOM    445  C   GLY    61       9.634  19.807  -5.015  1.00  0.00
ATOM    446  N   VAL    62       8.388  19.611  -4.597  1.00  0.00
ATOM    447  CA  VAL    62       7.958  19.921  -3.236  1.00  0.00
ATOM    448  CB  VAL    62       8.726  19.083  -2.197  1.00  0.00
ATOM    449  CG1 VAL    62       8.180  19.336  -0.801  1.00  0.00
ATOM    450  CG2 VAL    62       8.590  17.599  -2.504  1.00  0.00
ATOM    451  O   VAL    62       8.986  21.729  -2.021  1.00  0.00
ATOM    452  C   VAL    62       8.198  21.390  -2.916  1.00  0.00
TER
END



