
PFRMAT TS
TARGET T0309
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0309 model 5 Thu Jun  1 13:24:45 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   GLU    24      -8.636  13.442 -12.742  1.00  0.00
ATOM      3  CA  GLU    24      -8.154  12.114 -12.382  1.00  0.00
ATOM      4  CB  GLU    24      -6.626  12.103 -12.293  1.00  0.00
ATOM      5  CG  GLU    24      -5.926  12.364 -13.616  1.00  0.00
ATOM      6  CD  GLU    24      -5.723  13.841 -13.887  1.00  0.00
ATOM      7  OE1 GLU    24      -6.152  14.663 -13.051  1.00  0.00
ATOM      8  OE2 GLU    24      -5.134  14.177 -14.937  1.00  0.00
ATOM      9  O   GLU    24      -9.382  12.456 -10.348  1.00  0.00
ATOM     10  C   GLU    24      -8.713  11.680 -11.031  1.00  0.00
ATOM     11  N   GLN    25      -8.434  10.437 -10.652  1.00  0.00
ATOM     12  CA  GLN    25      -8.910   9.902  -9.382  1.00  0.00
ATOM     13  CB  GLN    25      -9.884   8.744  -9.619  1.00  0.00
ATOM     14  CG  GLN    25     -11.168   9.148 -10.323  1.00  0.00
ATOM     15  CD  GLN    25     -12.002  10.114  -9.504  1.00  0.00
ATOM     16  OE1 GLN    25     -12.101   9.983  -8.284  1.00  0.00
ATOM     17  NE2 GLN    25     -12.608  11.087 -10.174  1.00  0.00
ATOM     18  O   GLN    25      -6.596   9.416  -8.970  1.00  0.00
ATOM     19  C   GLN    25      -7.749   9.382  -8.541  1.00  0.00
ATOM     20  N   THR    26      -8.060   8.905  -7.340  1.00  0.00
ATOM     21  CA  THR    26      -7.042   8.382  -6.436  1.00  0.00
ATOM     22  CB  THR    26      -6.626   9.431  -5.389  1.00  0.00
ATOM     23  CG2 THR    26      -6.136  10.700  -6.069  1.00  0.00
ATOM     24  OG1 THR    26      -7.750   9.752  -4.559  1.00  0.00
ATOM     25  O   THR    26      -8.762   6.933  -5.595  1.00  0.00
ATOM     26  C   THR    26      -7.556   7.156  -5.689  1.00  0.00
ATOM     27  N   LYS    27      -6.630   6.363  -5.159  1.00  0.00
ATOM     28  CA  LYS    27      -6.990   5.159  -4.419  1.00  0.00
ATOM     29  CB  LYS    27      -5.809   4.186  -4.373  1.00  0.00
ATOM     30  CG  LYS    27      -6.113   2.872  -3.673  1.00  0.00
ATOM     31  CD  LYS    27      -4.919   1.933  -3.718  1.00  0.00
ATOM     32  CE  LYS    27      -5.224   0.619  -3.019  1.00  0.00
ATOM     33  NZ  LYS    27      -4.062  -0.312  -3.053  1.00  0.00
ATOM     34  O   LYS    27      -6.634   6.153  -2.261  1.00  0.00
ATOM     35  C   LYS    27      -7.383   5.499  -2.984  1.00  0.00
ATOM     36  N   GLU    28      -8.568   5.047  -2.578  1.00  0.00
ATOM     37  CA  GLU    28      -9.040   5.312  -1.233  1.00  0.00
ATOM     38  CB  GLU    28     -10.470   4.800  -1.058  1.00  0.00
ATOM     39  CG  GLU    28     -11.487   5.471  -1.968  1.00  0.00
ATOM     40  CD  GLU    28     -12.882   4.902  -1.803  1.00  0.00
ATOM     41  OE1 GLU    28     -13.046   3.949  -1.014  1.00  0.00
ATOM     42  OE2 GLU    28     -13.812   5.409  -2.466  1.00  0.00
ATOM     43  O   GLU    28      -7.206   3.968  -0.494  1.00  0.00
ATOM     44  C   GLU    28      -8.186   4.641  -0.175  1.00  0.00
ATOM     45  N   ALA    29      -8.557   4.827   1.087  1.00  0.00
ATOM     46  CA  ALA    29      -7.816   4.236   2.196  1.00  0.00
ATOM     47  CB  ALA    29      -7.547   5.279   3.270  1.00  0.00
ATOM     48  O   ALA    29      -9.826   3.020   2.699  1.00  0.00
ATOM     49  C   ALA    29      -8.602   3.092   2.828  1.00  0.00
ATOM     50  N   GLU    30      -7.893   2.200   3.511  1.00  0.00
ATOM     51  CA  GLU    30      -8.526   1.059   4.166  1.00  0.00
ATOM     52  CB  GLU    30      -8.838  -0.037   3.146  1.00  0.00
ATOM     53  CG  GLU    30      -9.488  -1.275   3.745  1.00  0.00
ATOM     54  CD  GLU    30      -9.904  -2.282   2.692  1.00  0.00
ATOM     55  OE1 GLU    30      -9.723  -1.995   1.490  1.00  0.00
ATOM     56  OE2 GLU    30     -10.413  -3.359   3.068  1.00  0.00
ATOM     57  O   GLU    30      -6.672  -0.262   4.927  1.00  0.00
ATOM     58  C   GLU    30      -7.610   0.470   5.235  1.00  0.00
ATOM     59  N   TYR    31      -7.890   0.797   6.494  1.00  0.00
ATOM     60  CA  TYR    31      -7.082   0.292   7.589  1.00  0.00
ATOM     61  CB  TYR    31      -5.805  -0.358   7.055  1.00  0.00
ATOM     62  CG  TYR    31      -6.046  -1.610   6.243  1.00  0.00
ATOM     63  CD1 TYR    31      -6.073  -1.564   4.855  1.00  0.00
ATOM     64  CD2 TYR    31      -6.250  -2.835   6.867  1.00  0.00
ATOM     65  CE1 TYR    31      -6.295  -2.703   4.104  1.00  0.00
ATOM     66  CE2 TYR    31      -6.472  -3.984   6.132  1.00  0.00
ATOM     67  CZ  TYR    31      -6.494  -3.909   4.741  1.00  0.00
ATOM     68  OH  TYR    31      -6.713  -5.046   3.996  1.00  0.00
ATOM     69  O   TYR    31      -7.015   2.550   8.368  1.00  0.00
ATOM     70  C   TYR    31      -6.666   1.384   8.553  1.00  0.00
ATOM     71  N   THR    32      -5.920   1.007   9.585  1.00  0.00
ATOM     72  CA  THR    32      -5.456   1.963  10.584  1.00  0.00
ATOM     73  CB  THR    32      -5.092   1.265  11.908  1.00  0.00
ATOM     74  CG2 THR    32      -4.644   2.286  12.943  1.00  0.00
ATOM     75  OG1 THR    32      -6.235   0.564  12.412  1.00  0.00
ATOM     76  O   THR    32      -3.114   2.153  10.090  1.00  0.00
ATOM     77  C   THR    32      -4.215   2.702  10.093  1.00  0.00
ATOM     78  N   TYR    33      -4.402   3.951   9.678  1.00  0.00
ATOM     79  CA  TYR    33      -3.299   4.763   9.181  1.00  0.00
ATOM     80  CB  TYR    33      -3.291   4.779   7.652  1.00  0.00
ATOM     81  CG  TYR    33      -3.117   3.413   7.027  1.00  0.00
ATOM     82  CD1 TYR    33      -4.221   2.644   6.677  1.00  0.00
ATOM     83  CD2 TYR    33      -1.850   2.896   6.787  1.00  0.00
ATOM     84  CE1 TYR    33      -4.071   1.396   6.106  1.00  0.00
ATOM     85  CE2 TYR    33      -1.682   1.648   6.216  1.00  0.00
ATOM     86  CZ  TYR    33      -2.808   0.899   5.875  1.00  0.00
ATOM     87  OH  TYR    33      -2.655  -0.345   5.306  1.00  0.00
ATOM     88  O   TYR    33      -4.487   6.812   9.589  1.00  0.00
ATOM     89  C   TYR    33      -3.420   6.204   9.672  1.00  0.00
ATOM     90  N   ASP    34      -2.318   6.742  10.182  1.00  0.00
ATOM     91  CA  ASP    34      -2.298   8.111  10.685  1.00  0.00
ATOM     92  CB  ASP    34      -0.963   8.411  11.368  1.00  0.00
ATOM     93  CG  ASP    34      -1.062   9.543  12.372  1.00  0.00
ATOM     94  OD1 ASP    34      -2.122  10.202  12.420  1.00  0.00
ATOM     95  OD2 ASP    34      -0.081   9.770  13.110  1.00  0.00
ATOM     96  O   ASP    34      -2.724   8.725   8.402  1.00  0.00
ATOM     97  C   ASP    34      -2.489   9.110   9.547  1.00  0.00
ATOM     98  N   PHE    35      -2.386  10.394   9.872  1.00  0.00
ATOM     99  CA  PHE    35      -2.547  11.450   8.879  1.00  0.00
ATOM    100  CB  PHE    35      -2.327  12.824   9.516  1.00  0.00
ATOM    101  CG  PHE    35      -2.436  13.965   8.546  1.00  0.00
ATOM    102  CD1 PHE    35      -3.674  14.439   8.149  1.00  0.00
ATOM    103  CD2 PHE    35      -1.301  14.566   8.031  1.00  0.00
ATOM    104  CE1 PHE    35      -3.774  15.489   7.256  1.00  0.00
ATOM    105  CE2 PHE    35      -1.401  15.616   7.139  1.00  0.00
ATOM    106  CZ  PHE    35      -2.631  16.079   6.752  1.00  0.00
ATOM    107  O   PHE    35      -1.908  11.359   6.567  1.00  0.00
ATOM    108  C   PHE    35      -1.545  11.291   7.741  1.00  0.00
ATOM    109  N   LYS    36      -0.282  11.077   8.097  1.00  0.00
ATOM    110  CA  LYS    36       0.773  10.908   7.104  1.00  0.00
ATOM    111  CB  LYS    36       2.149  11.026   7.761  1.00  0.00
ATOM    112  CG  LYS    36       3.312  10.909   6.788  1.00  0.00
ATOM    113  CD  LYS    36       4.643  11.121   7.492  1.00  0.00
ATOM    114  CE  LYS    36       5.808  10.971   6.526  1.00  0.00
ATOM    115  NZ  LYS    36       7.120  11.122   7.212  1.00  0.00
ATOM    116  O   LYS    36       0.651   9.435   5.211  1.00  0.00
ATOM    117  C   LYS    36       0.677   9.539   6.438  1.00  0.00
ATOM    118  N   GLU    37       0.626   8.491   7.254  1.00  0.00
ATOM    119  CA  GLU    37       0.538   7.127   6.744  1.00  0.00
ATOM    120  CB  GLU    37       0.339   6.137   7.893  1.00  0.00
ATOM    121  CG  GLU    37       1.574   5.928   8.752  1.00  0.00
ATOM    122  CD  GLU    37       1.319   4.998   9.924  1.00  0.00
ATOM    123  OE1 GLU    37       0.156   4.584  10.110  1.00  0.00
ATOM    124  OE2 GLU    37       2.283   4.683  10.653  1.00  0.00
ATOM    125  O   GLU    37      -0.478   6.502   4.659  1.00  0.00
ATOM    126  C   GLU    37      -0.636   6.983   5.780  1.00  0.00
ATOM    127  N   ILE    38      -1.815   7.403   6.227  1.00  0.00
ATOM    128  CA  ILE    38      -3.001   7.312   5.393  1.00  0.00
ATOM    129  CB  ILE    38      -4.265   7.737   6.160  1.00  0.00
ATOM    130  CG1 ILE    38      -4.580   6.731   7.269  1.00  0.00
ATOM    131  CG2 ILE    38      -5.461   7.809   5.222  1.00  0.00
ATOM    132  CD1 ILE    38      -5.645   7.201   8.236  1.00  0.00
ATOM    133  O   ILE    38      -3.393   7.829   3.090  1.00  0.00
ATOM    134  C   ILE    38      -2.913   8.196   4.164  1.00  0.00
ATOM    135  N   LEU    39      -2.302   9.364   4.321  1.00  0.00
ATOM    136  CA  LEU    39      -2.156  10.306   3.216  1.00  0.00
ATOM    137  CB  LEU    39      -1.464  11.585   3.690  1.00  0.00
ATOM    138  CG  LEU    39      -1.227  12.661   2.628  1.00  0.00
ATOM    139  CD1 LEU    39      -2.548  13.151   2.055  1.00  0.00
ATOM    140  CD2 LEU    39      -0.497  13.855   3.226  1.00  0.00
ATOM    141  O   LEU    39      -1.687   9.784   0.920  1.00  0.00
ATOM    142  C   LEU    39      -1.320   9.701   2.092  1.00  0.00
ATOM    143  N   SER    40      -0.199   9.089   2.458  1.00  0.00
ATOM    144  CA  SER    40       0.686   8.468   1.480  1.00  0.00
ATOM    145  CB  SER    40       1.978   7.993   2.151  1.00  0.00
ATOM    146  OG  SER    40       1.721   6.938   3.061  1.00  0.00
ATOM    147  O   SER    40       0.360   6.883  -0.291  1.00  0.00
ATOM    148  C   SER    40       0.017   7.264   0.828  1.00  0.00
ATOM    149  N   GLU    41      -0.938   6.669   1.534  1.00  0.00
ATOM    150  CA  GLU    41      -1.655   5.507   1.022  1.00  0.00
ATOM    151  CB  GLU    41      -2.380   4.782   2.158  1.00  0.00
ATOM    152  CG  GLU    41      -1.452   4.103   3.153  1.00  0.00
ATOM    153  CD  GLU    41      -0.550   3.076   2.500  1.00  0.00
ATOM    154  OE1 GLU    41      -1.076   2.172   1.815  1.00  0.00
ATOM    155  OE2 GLU    41       0.684   3.171   2.673  1.00  0.00
ATOM    156  O   GLU    41      -3.057   5.136  -0.893  1.00  0.00
ATOM    157  C   GLU    41      -2.693   5.921  -0.016  1.00  0.00
ATOM    158  N   PHE    42      -3.166   7.158   0.088  1.00  0.00
ATOM    159  CA  PHE    42      -4.162   7.677  -0.843  1.00  0.00
ATOM    160  CB  PHE    42      -4.773   8.973  -0.307  1.00  0.00
ATOM    161  CG  PHE    42      -5.959   9.454  -1.092  1.00  0.00
ATOM    162  CD1 PHE    42      -7.195   8.848  -0.949  1.00  0.00
ATOM    163  CD2 PHE    42      -5.839  10.513  -1.974  1.00  0.00
ATOM    164  CE1 PHE    42      -8.286   9.292  -1.673  1.00  0.00
ATOM    165  CE2 PHE    42      -6.929  10.957  -2.699  1.00  0.00
ATOM    166  CZ  PHE    42      -8.149  10.350  -2.551  1.00  0.00
ATOM    167  O   PHE    42      -3.986   7.463  -3.229  1.00  0.00
ATOM    168  C   PHE    42      -3.536   7.973  -2.202  1.00  0.00
ATOM    169  N   ASN    43      -0.746   7.012  -3.051  1.00  0.00
ATOM    170  CA  ASN    43       0.117   5.879  -3.362  1.00  0.00
ATOM    171  CB  ASN    43      -0.145   4.723  -2.393  1.00  0.00
ATOM    172  CG  ASN    43       0.857   3.595  -2.546  1.00  0.00
ATOM    173  ND2 ASN    43       0.996   2.784  -1.504  1.00  0.00
ATOM    174  OD1 ASN    43       1.499   3.459  -3.587  1.00  0.00
ATOM    175  O   ASN    43      -1.237   4.956  -5.115  1.00  0.00
ATOM    176  C   ASN    43      -0.132   5.378  -4.780  1.00  0.00
ATOM    177  N   GLY    44       0.905   5.428  -5.612  1.00  0.00
ATOM    178  CA  GLY    44       0.777   4.976  -6.985  1.00  0.00
ATOM    179  O   GLY    44       2.150   5.123  -8.937  1.00  0.00
ATOM    180  C   GLY    44       1.741   5.682  -7.919  1.00  0.00
ATOM    181  N   LYS    45       2.103   6.913  -7.573  1.00  0.00
ATOM    182  CA  LYS    45       3.021   7.697  -8.392  1.00  0.00
ATOM    183  CB  LYS    45       2.390   9.038  -8.771  1.00  0.00
ATOM    184  CG  LYS    45       1.147   8.916  -9.639  1.00  0.00
ATOM    185  CD  LYS    45       0.568  10.282  -9.969  1.00  0.00
ATOM    186  CE  LYS    45      -0.662  10.161 -10.854  1.00  0.00
ATOM    187  NZ  LYS    45      -1.251  11.490 -11.168  1.00  0.00
ATOM    188  O   LYS    45       5.381   8.112  -8.240  1.00  0.00
ATOM    189  C   LYS    45       4.318   7.976  -7.637  1.00  0.00
ATOM    190  N   ASN    46       4.220   8.059  -6.315  1.00  0.00
ATOM    191  CA  ASN    46       5.392   8.320  -5.500  1.00  0.00
ATOM    192  CB  ASN    46       6.590   7.518  -6.011  1.00  0.00
ATOM    193  CG  ASN    46       7.825   7.703  -5.151  1.00  0.00
ATOM    194  ND2 ASN    46       8.987   7.386  -5.711  1.00  0.00
ATOM    195  OD1 ASN    46       7.733   8.126  -3.999  1.00  0.00
ATOM    196  O   ASN    46       6.490  10.239  -6.412  1.00  0.00
ATOM    197  C   ASN    46       5.789   9.783  -5.507  1.00  0.00
ATOM    198  N   VAL    47       5.339  10.522  -4.499  1.00  0.00
ATOM    199  CA  VAL    47       5.650  11.943  -4.393  1.00  0.00
ATOM    200  CB  VAL    47       4.399  12.813  -4.617  1.00  0.00
ATOM    201  CG1 VAL    47       3.983  12.780  -6.079  1.00  0.00
ATOM    202  CG2 VAL    47       3.239  12.302  -3.775  1.00  0.00
ATOM    203  O   VAL    47       6.214  11.435  -2.115  1.00  0.00
ATOM    204  C   VAL    47       6.207  12.278  -3.013  1.00  0.00
ATOM    205  N   SER    48       0.540  22.843   7.682  1.00  0.00
ATOM    206  CA  SER    48       0.120  22.718   6.292  1.00  0.00
ATOM    207  CB  SER    48      -0.093  24.101   5.671  1.00  0.00
ATOM    208  OG  SER    48      -0.509  23.995   4.321  1.00  0.00
ATOM    209  O   SER    48       2.340  22.379   5.437  1.00  0.00
ATOM    210  C   SER    48       1.174  21.983   5.469  1.00  0.00
ATOM    211  N   ILE    49       0.756  20.913   4.804  1.00  0.00
ATOM    212  CA  ILE    49       1.662  20.122   3.980  1.00  0.00
ATOM    213  CB  ILE    49       1.587  18.625   4.333  1.00  0.00
ATOM    214  CG1 ILE    49       0.171  18.092   4.101  1.00  0.00
ATOM    215  CG2 ILE    49       1.951  18.404   5.794  1.00  0.00
ATOM    216  CD1 ILE    49       0.055  16.590   4.234  1.00  0.00
ATOM    217  O   ILE    49       0.195  20.618   2.145  1.00  0.00
ATOM    218  C   ILE    49       1.320  20.265   2.502  1.00  0.00
ATOM    219  N   THR    50       2.295  19.988   1.642  1.00  0.00
ATOM    220  CA  THR    50       2.097  20.087   0.201  1.00  0.00
ATOM    221  CB  THR    50       2.737  21.364  -0.371  1.00  0.00
ATOM    222  CG2 THR    50       2.175  22.597   0.320  1.00  0.00
ATOM    223  OG1 THR    50       4.155  21.325  -0.166  1.00  0.00
ATOM    224  O   THR    50       3.661  18.279  -0.026  1.00  0.00
ATOM    225  C   THR    50       2.718  18.897  -0.522  1.00  0.00
ATOM    226  N   VAL    51       2.186  18.582  -1.697  1.00  0.00
ATOM    227  CA  VAL    51       2.690  17.466  -2.491  1.00  0.00
ATOM    228  CB  VAL    51       1.549  16.537  -2.947  1.00  0.00
ATOM    229  CG1 VAL    51       2.094  15.403  -3.802  1.00  0.00
ATOM    230  CG2 VAL    51       0.840  15.933  -1.744  1.00  0.00
ATOM    231  O   VAL    51       2.827  18.688  -4.553  1.00  0.00
ATOM    232  C   VAL    51       3.406  17.967  -3.741  1.00  0.00
ATOM    233  N   LYS    52       4.670  17.577  -3.888  1.00  0.00
ATOM    234  CA  LYS    52       5.463  17.985  -5.041  1.00  0.00
ATOM    235  CB  LYS    52       6.653  18.840  -4.598  1.00  0.00
ATOM    236  CG  LYS    52       6.263  20.179  -3.992  1.00  0.00
ATOM    237  CD  LYS    52       7.490  20.981  -3.589  1.00  0.00
ATOM    238  CE  LYS    52       7.101  22.331  -3.010  1.00  0.00
ATOM    239  NZ  LYS    52       8.294  23.136  -2.627  1.00  0.00
ATOM    240  O   LYS    52       6.105  15.670  -5.244  1.00  0.00
ATOM    241  C   LYS    52       6.003  16.769  -5.787  1.00  0.00
ATOM    242  N   GLU    53       6.355  16.970  -7.067  1.00  0.00
ATOM    243  CA  GLU    53       6.890  15.902  -7.917  1.00  0.00
ATOM    244  CB  GLU    53       6.971  16.365  -9.372  1.00  0.00
ATOM    245  CG  GLU    53       7.395  15.279 -10.347  1.00  0.00
ATOM    246  CD  GLU    53       7.438  15.768 -11.782  1.00  0.00
ATOM    247  OE1 GLU    53       7.078  16.939 -12.021  1.00  0.00
ATOM    248  OE2 GLU    53       7.831  14.979 -12.666  1.00  0.00
ATOM    249  O   GLU    53       9.211  16.287  -7.443  1.00  0.00
ATOM    250  C   GLU    53       8.290  15.471  -7.496  1.00  0.00
ATOM    251  N   GLU    54       8.445  14.185  -7.198  1.00  0.00
ATOM    252  CA  GLU    54       9.736  13.648  -6.785  1.00  0.00
ATOM    253  CB  GLU    54       9.589  12.829  -5.501  1.00  0.00
ATOM    254  CG  GLU    54       9.034  13.614  -4.323  1.00  0.00
ATOM    255  CD  GLU    54       9.934  14.763  -3.914  1.00  0.00
ATOM    256  OE1 GLU    54      11.129  14.515  -3.647  1.00  0.00
ATOM    257  OE2 GLU    54       9.444  15.911  -3.863  1.00  0.00
ATOM    258  O   GLU    54       9.619  12.246  -8.741  1.00  0.00
ATOM    259  C   GLU    54      10.324  12.741  -7.861  1.00  0.00
ATOM    260  N   ASN    55      11.644  12.518  -7.792  1.00  0.00
ATOM    261  CA  ASN    55      12.355  11.671  -8.753  1.00  0.00
ATOM    262  CB  ASN    55      13.868  11.800  -8.564  1.00  0.00
ATOM    263  CG  ASN    55      14.394  13.157  -8.987  1.00  0.00
ATOM    264  ND2 ASN    55      15.530  13.551  -8.423  1.00  0.00
ATOM    265  OD1 ASN    55      13.786  13.842  -9.808  1.00  0.00
ATOM    266  O   ASN    55      11.868   9.693  -7.484  1.00  0.00
ATOM    267  C   ASN    55      12.000  10.196  -8.600  1.00  0.00
ATOM    268  N   GLU    56      11.845   9.509  -9.726  1.00  0.00
ATOM    269  CA  GLU    56      11.508   8.091  -9.716  1.00  0.00
ATOM    270  CB  GLU    56      10.009   7.895  -9.952  1.00  0.00
ATOM    271  CG  GLU    56       9.530   8.356 -11.319  1.00  0.00
ATOM    272  CD  GLU    56       8.028   8.235 -11.482  1.00  0.00
ATOM    273  OE1 GLU    56       7.360   7.797 -10.523  1.00  0.00
ATOM    274  OE2 GLU    56       7.519   8.578 -12.571  1.00  0.00
ATOM    275  O   GLU    56      12.751   7.925 -11.774  1.00  0.00
ATOM    276  C   GLU    56      12.261   7.339 -10.808  1.00  0.00
ATOM    277  N   LEU    57      12.359   6.010 -10.653  1.00  0.00
ATOM    278  CA  LEU    57      13.054   5.150 -11.616  1.00  0.00
ATOM    279  CB  LEU    57      13.208   3.734 -11.056  1.00  0.00
ATOM    280  CG  LEU    57      14.065   3.594  -9.795  1.00  0.00
ATOM    281  CD1 LEU    57      14.045   2.161  -9.288  1.00  0.00
ATOM    282  CD2 LEU    57      15.509   3.978 -10.080  1.00  0.00
ATOM    283  O   LEU    57      11.142   5.433 -13.042  1.00  0.00
ATOM    284  C   LEU    57      12.304   5.038 -12.940  1.00  0.00
ATOM    285  N   PRO    58      12.975   4.499 -13.951  1.00  0.00
ATOM    286  CA  PRO    58      12.373   4.333 -15.268  1.00  0.00
ATOM    287  CB  PRO    58      13.406   3.519 -16.049  1.00  0.00
ATOM    288  CG  PRO    58      14.717   3.898 -15.443  1.00  0.00
ATOM    289  CD  PRO    58      14.478   3.993 -13.962  1.00  0.00
ATOM    290  O   PRO    58      11.004   2.382 -14.979  1.00  0.00
ATOM    291  C   PRO    58      11.040   3.598 -15.168  1.00  0.00
ATOM    292  N   VAL    59       9.947   4.343 -15.299  1.00  0.00
ATOM    293  CA  VAL    59       8.612   3.760 -15.224  1.00  0.00
ATOM    294  CB  VAL    59       7.526   4.787 -15.591  1.00  0.00
ATOM    295  CG1 VAL    59       7.530   5.945 -14.605  1.00  0.00
ATOM    296  CG2 VAL    59       7.769   5.344 -16.986  1.00  0.00
ATOM    297  O   VAL    59       9.235   2.463 -17.148  1.00  0.00
ATOM    298  C   VAL    59       8.479   2.581 -16.183  1.00  0.00
ATOM    299  N   LYS    60       7.514   1.709 -15.910  1.00  0.00
ATOM    300  CA  LYS    60       7.281   0.538 -16.747  1.00  0.00
ATOM    301  CB  LYS    60       7.802  -0.725 -16.059  1.00  0.00
ATOM    302  CG  LYS    60       9.294  -0.705 -15.772  1.00  0.00
ATOM    303  CD  LYS    60       9.736  -1.974 -15.060  1.00  0.00
ATOM    304  CE  LYS    60      11.239  -1.986 -14.837  1.00  0.00
ATOM    305  NZ  LYS    60      11.708  -3.286 -14.280  1.00  0.00
ATOM    306  O   LYS    60       4.965   1.148 -16.570  1.00  0.00
ATOM    307  C   LYS    60       5.791   0.355 -17.021  1.00  0.00
ATOM    308  N   GLY    61       5.457  -0.696 -17.762  1.00  0.00
ATOM    309  CA  GLY    61       4.066  -0.985 -18.095  1.00  0.00
ATOM    310  O   GLY    61       4.233  -3.278 -17.399  1.00  0.00
ATOM    311  C   GLY    61       3.577  -2.235 -17.370  1.00  0.00
ATOM    312  N   VAL    62       2.423  -2.123 -16.723  1.00  0.00
ATOM    313  CA  VAL    62       1.846  -3.245 -15.991  1.00  0.00
ATOM    314  CB  VAL    62       0.858  -2.765 -14.911  1.00  0.00
ATOM    315  CG1 VAL    62       1.560  -1.859 -13.910  1.00  0.00
ATOM    316  CG2 VAL    62      -0.286  -1.987 -15.543  1.00  0.00
ATOM    317  O   VAL    62       0.678  -3.778 -18.021  1.00  0.00
ATOM    318  C   VAL    62       1.089  -4.177 -16.929  1.00  0.00
ATOM    319  N   GLU    63       0.903  -5.421 -16.499  1.00  0.00
ATOM    320  CA  GLU    63       0.196  -6.410 -17.301  1.00  0.00
ATOM    321  CB  GLU    63      -0.036  -7.689 -16.493  1.00  0.00
ATOM    322  CG  GLU    63      -0.954  -7.509 -15.295  1.00  0.00
ATOM    323  CD  GLU    63      -1.000  -8.736 -14.407  1.00  0.00
ATOM    324  OE1 GLU    63      -1.409  -9.809 -14.896  1.00  0.00
ATOM    325  OE2 GLU    63      -0.626  -8.624 -13.219  1.00  0.00
ATOM    326  O   GLU    63      -1.732  -4.988 -17.124  1.00  0.00
ATOM    327  C   GLU    63      -1.162  -5.883 -17.750  1.00  0.00
ATOM    328  N   MET    64      -1.678  -6.442 -18.841  1.00  0.00
ATOM    329  CA  MET    64      -2.972  -6.029 -19.373  1.00  0.00
ATOM    330  CB  MET    64      -3.072  -6.373 -20.861  1.00  0.00
ATOM    331  CG  MET    64      -2.055  -5.656 -21.734  1.00  0.00
ATOM    332  SD  MET    64      -2.186  -3.861 -21.627  1.00  0.00
ATOM    333  CE  MET    64      -3.759  -3.588 -22.438  1.00  0.00
ATOM    334  O   MET    64      -4.108  -7.950 -18.490  1.00  0.00
ATOM    335  C   MET    64      -4.114  -6.729 -18.648  1.00  0.00
ATOM    336  N   ALA    65      -5.096  -5.949 -18.207  1.00  0.00
ATOM    337  CA  ALA    65      -6.248  -6.494 -17.498  1.00  0.00
ATOM    338  CB  ALA    65      -7.200  -5.378 -17.096  1.00  0.00
ATOM    339  O   ALA    65      -7.155  -7.275 -19.579  1.00  0.00
ATOM    340  C   ALA    65      -7.015  -7.478 -18.374  1.00  0.00
ATOM    341  N   GLY    66      -7.510  -8.547 -17.757  1.00  0.00
ATOM    342  CA  GLY    66      -8.257  -9.549 -18.496  1.00  0.00
ATOM    343  O   GLY    66      -9.931  -8.058 -19.330  1.00  0.00
ATOM    344  C   GLY    66      -9.688  -9.125 -18.761  1.00  0.00
ATOM    345  N   ASP    67     -10.638  -9.958 -18.353  1.00  0.00
ATOM    346  CA  ASP    67     -12.052  -9.663 -18.552  1.00  0.00
ATOM    347  CB  ASP    67     -12.580 -10.386 -19.793  1.00  0.00
ATOM    348  CG  ASP    67     -12.521 -11.894 -19.657  1.00  0.00
ATOM    349  OD1 ASP    67     -12.210 -12.380 -18.549  1.00  0.00
ATOM    350  OD2 ASP    67     -12.784 -12.593 -20.660  1.00  0.00
ATOM    351  O   ASP    67     -12.352 -10.736 -16.423  1.00  0.00
ATOM    352  C   ASP    67     -12.875 -10.115 -17.349  1.00  0.00
ATOM    353  N   PRO    68     -14.164  -9.797 -17.370  1.00  0.00
ATOM    354  CA  PRO    68     -15.060 -10.169 -16.280  1.00  0.00
ATOM    355  CB  PRO    68     -16.093  -9.041 -16.247  1.00  0.00
ATOM    356  CG  PRO    68     -16.237  -8.626 -17.675  1.00  0.00
ATOM    357  CD  PRO    68     -14.875  -8.778 -18.292  1.00  0.00
ATOM    358  O   PRO    68     -15.327 -12.235 -17.473  1.00  0.00
ATOM    359  C   PRO    68     -15.715 -11.519 -16.549  1.00  0.00
ATOM    360  N   LEU    69     -16.710 -11.862 -15.737  1.00  0.00
ATOM    361  CA  LEU    69     -17.419 -13.127 -15.889  1.00  0.00
ATOM    362  CB  LEU    69     -18.185 -13.469 -14.611  1.00  0.00
ATOM    363  CG  LEU    69     -17.351 -13.587 -13.332  1.00  0.00
ATOM    364  CD1 LEU    69     -18.241 -13.888 -12.137  1.00  0.00
ATOM    365  CD2 LEU    69     -16.330 -14.707 -13.459  1.00  0.00
ATOM    366  O   LEU    69     -18.537 -13.992 -17.830  1.00  0.00
ATOM    367  C   LEU    69     -18.419 -13.056 -17.039  1.00  0.00
ATOM    368  N   GLU    70     -35.028 -11.215 -36.086  1.00  0.00
ATOM    369  CA  GLU    70     -35.651 -11.593 -37.348  1.00  0.00
ATOM    370  CB  GLU    70     -37.161 -11.764 -37.168  1.00  0.00
ATOM    371  CG  GLU    70     -37.888 -12.217 -38.425  1.00  0.00
ATOM    372  CD  GLU    70     -39.372 -12.428 -38.195  1.00  0.00
ATOM    373  OE1 GLU    70     -39.833 -12.218 -37.054  1.00  0.00
ATOM    374  OE2 GLU    70     -40.075 -12.804 -39.157  1.00  0.00
ATOM    375  O   GLU    70     -35.553  -9.330 -38.151  1.00  0.00
ATOM    376  C   GLU    70     -35.417 -10.526 -38.413  1.00  0.00
ATOM    377  N   HIS    71     -35.060 -10.966 -39.615  1.00  0.00
ATOM    378  CA  HIS    71     -34.806 -10.049 -40.722  1.00  0.00
ATOM    379  CB  HIS    71     -33.359  -9.549 -40.681  1.00  0.00
ATOM    380  CG  HIS    71     -33.021  -8.591 -41.780  1.00  0.00
ATOM    381  CD2 HIS    71     -32.347  -8.684 -43.067  1.00  0.00
ATOM    382  ND1 HIS    71     -33.352  -7.255 -41.731  1.00  0.00
ATOM    383  CE1 HIS    71     -32.919  -6.654 -42.854  1.00  0.00
ATOM    384  NE2 HIS    71     -32.315  -7.506 -43.660  1.00  0.00
ATOM    385  O   HIS    71     -34.429 -11.772 -42.352  1.00  0.00
ATOM    386  C   HIS    71     -35.035 -10.739 -42.062  1.00  0.00
ATOM    387  N   HIS    72     -35.912 -10.163 -42.878  1.00  0.00
ATOM    388  CA  HIS    72     -36.220 -10.723 -44.189  1.00  0.00
ATOM    389  CB  HIS    72     -37.682 -11.169 -44.249  1.00  0.00
ATOM    390  CG  HIS    72     -38.024 -12.248 -43.271  1.00  0.00
ATOM    391  CD2 HIS    72     -38.629 -12.296 -41.947  1.00  0.00
ATOM    392  ND1 HIS    72     -37.780 -13.583 -43.517  1.00  0.00
ATOM    393  CE1 HIS    72     -38.194 -14.307 -42.461  1.00  0.00
ATOM    394  NE2 HIS    72     -38.704 -13.540 -41.515  1.00  0.00
ATOM    395  O   HIS    72     -36.141  -8.488 -45.067  1.00  0.00
ATOM    396  C   HIS    72     -35.990  -9.690 -45.288  1.00  0.00
ATOM    397  N   HIS    73     -35.621 -10.166 -46.474  1.00  0.00
ATOM    398  CA  HIS    73     -35.369  -9.284 -47.608  1.00  0.00
ATOM    399  CB  HIS    73     -34.441  -9.963 -48.617  1.00  0.00
ATOM    400  CG  HIS    73     -33.047 -10.169 -48.115  1.00  0.00
ATOM    401  CD2 HIS    73     -32.278 -11.300 -47.616  1.00  0.00
ATOM    402  ND1 HIS    73     -32.126  -9.145 -48.035  1.00  0.00
ATOM    403  CE1 HIS    73     -30.971  -9.633 -47.549  1.00  0.00
ATOM    404  NE2 HIS    73     -31.054 -10.926 -47.296  1.00  0.00
ATOM    405  O   HIS    73     -37.656  -9.664 -48.239  1.00  0.00
ATOM    406  C   HIS    73     -36.671  -8.928 -48.319  1.00  0.00
ATOM    407  N   HIS    74     -36.669  -7.794 -49.011  1.00  0.00
ATOM    408  CA  HIS    74     -37.851  -7.340 -49.735  1.00  0.00
ATOM    409  CB  HIS    74     -38.458  -6.111 -49.055  1.00  0.00
ATOM    410  CG  HIS    74     -38.937  -6.369 -47.660  1.00  0.00
ATOM    411  CD2 HIS    74     -38.435  -6.090 -46.322  1.00  0.00
ATOM    412  ND1 HIS    74     -40.122  -7.014 -47.387  1.00  0.00
ATOM    413  CE1 HIS    74     -40.279  -7.098 -46.054  1.00  0.00
ATOM    414  NE2 HIS    74     -39.270  -6.546 -45.409  1.00  0.00
ATOM    415  O   HIS    74     -36.330  -6.742 -51.497  1.00  0.00
ATOM    416  C   HIS    74     -37.497  -6.963 -51.171  1.00  0.00
ATOM    417  N   HIS    75     -38.510  -6.894 -52.028  1.00  0.00
ATOM    418  CA  HIS    75     -38.306  -6.545 -53.429  1.00  0.00
ATOM    419  CB  HIS    75     -39.087  -7.497 -54.339  1.00  0.00
ATOM    420  CG  HIS    75     -38.655  -8.925 -54.230  1.00  0.00
ATOM    421  CD2 HIS    75     -39.224 -10.143 -53.671  1.00  0.00
ATOM    422  ND1 HIS    75     -37.452  -9.378 -54.726  1.00  0.00
ATOM    423  CE1 HIS    75     -37.345 -10.697 -54.480  1.00  0.00
ATOM    424  NE2 HIS    75     -38.405 -11.163 -53.847  1.00  0.00
ATOM    425  O   HIS    75     -39.248  -4.424 -52.810  1.00  0.00
ATOM    426  C   HIS    75     -38.779  -5.122 -53.709  1.00  0.00
ATOM    427  N   HIS    76     -38.653  -4.698 -54.963  1.00  0.00
ATOM    428  CA  HIS    76     -39.067  -3.357 -55.361  1.00  0.00
ATOM    429  CB  HIS    76     -38.824  -3.141 -56.857  1.00  0.00
ATOM    430  CG  HIS    76     -37.382  -3.218 -57.251  1.00  0.00
ATOM    431  CD2 HIS    76     -36.567  -4.139 -58.033  1.00  0.00
ATOM    432  ND1 HIS    76     -36.455  -2.273 -56.870  1.00  0.00
ATOM    433  CE1 HIS    76     -35.254  -2.611 -57.373  1.00  0.00
ATOM    434  NE2 HIS    76     -35.314  -3.729 -58.071  1.00  0.00
ATOM    435  O   HIS    76     -41.057  -2.024 -55.187  1.00  0.00
ATOM    436  C   HIS    76     -40.552  -3.142 -55.084  1.00  0.00
TER
END



