
PFRMAT TS
TARGET T0311
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0311 model 5 Thu Jun  1 13:31:52 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   ASP    11      -1.512   1.588  -3.560  1.00  0.00
ATOM      3  CA  ASP    11      -2.057   2.744  -4.256  1.00  0.00
ATOM      4  CB  ASP    11      -3.460   2.440  -4.785  1.00  0.00
ATOM      5  CG  ASP    11      -3.444   1.500  -5.973  1.00  0.00
ATOM      6  OD1 ASP    11      -2.351   1.271  -6.535  1.00  0.00
ATOM      7  OD2 ASP    11      -4.523   0.991  -6.344  1.00  0.00
ATOM      8  O   ASP    11      -1.834   5.096  -3.848  1.00  0.00
ATOM      9  C   ASP    11      -2.190   4.008  -3.400  1.00  0.00
ATOM     10  N   ILE    12      -2.694   3.880  -2.177  1.00  0.00
ATOM     11  CA  ILE    12      -2.853   5.070  -1.336  1.00  0.00
ATOM     12  CB  ILE    12      -3.702   4.769  -0.087  1.00  0.00
ATOM     13  CG1 ILE    12      -5.148   4.467  -0.485  1.00  0.00
ATOM     14  CG2 ILE    12      -3.702   5.961   0.858  1.00  0.00
ATOM     15  CD1 ILE    12      -5.987   3.906   0.642  1.00  0.00
ATOM     16  O   ILE    12      -1.342   6.829  -0.740  1.00  0.00
ATOM     17  C   ILE    12      -1.514   5.614  -0.842  1.00  0.00
ATOM     18  N   ILE    13      -0.558   4.730  -0.560  1.00  0.00
ATOM     19  CA  ILE    13       0.756   5.184  -0.113  1.00  0.00
ATOM     20  CB  ILE    13       1.699   3.999   0.163  1.00  0.00
ATOM     21  CG1 ILE    13       1.215   3.203   1.377  1.00  0.00
ATOM     22  CG2 ILE    13       3.110   4.493   0.443  1.00  0.00
ATOM     23  CD1 ILE    13       1.921   1.878   1.560  1.00  0.00
ATOM     24  O   ILE    13       1.936   7.110  -0.914  1.00  0.00
ATOM     25  C   ILE    13       1.372   6.055  -1.195  1.00  0.00
ATOM     26  N   GLN    14       1.259   5.600  -2.433  1.00  0.00
ATOM     27  CA  GLN    14       1.798   6.344  -3.563  1.00  0.00
ATOM     28  CB  GLN    14       1.575   5.574  -4.866  1.00  0.00
ATOM     29  CG  GLN    14       2.208   6.223  -6.087  1.00  0.00
ATOM     30  CD  GLN    14       3.720   6.282  -5.996  1.00  0.00
ATOM     31  OE1 GLN    14       4.370   5.300  -5.638  1.00  0.00
ATOM     32  NE2 GLN    14       4.286   7.439  -6.321  1.00  0.00
ATOM     33  O   GLN    14       1.743   8.725  -3.855  1.00  0.00
ATOM     34  C   GLN    14       1.098   7.699  -3.661  1.00  0.00
ATOM     35  N   GLU    15      -0.224   7.701  -3.515  1.00  0.00
ATOM     36  CA  GLU    15      -0.982   8.948  -3.589  1.00  0.00
ATOM     37  CB  GLU    15      -2.476   8.678  -3.398  1.00  0.00
ATOM     38  CG  GLU    15      -3.347   9.919  -3.506  1.00  0.00
ATOM     39  CD  GLU    15      -4.823   9.608  -3.345  1.00  0.00
ATOM     40  OE1 GLU    15      -5.165   8.422  -3.162  1.00  0.00
ATOM     41  OE2 GLU    15      -5.638  10.553  -3.403  1.00  0.00
ATOM     42  O   GLU    15      -0.187  11.059  -2.766  1.00  0.00
ATOM     43  C   GLU    15      -0.508   9.902  -2.496  1.00  0.00
ATOM     44  N   SER    16      -0.464   9.414  -1.257  1.00  0.00
ATOM     45  CA  SER    16      -0.019  10.237  -0.137  1.00  0.00
ATOM     46  CB  SER    16       0.030   9.411   1.149  1.00  0.00
ATOM     47  OG  SER    16      -1.268   9.011   1.549  1.00  0.00
ATOM     48  O   SER    16       1.621  11.993  -0.178  1.00  0.00
ATOM     49  C   SER    16       1.374  10.800  -0.396  1.00  0.00
ATOM     50  N   LEU    17       2.281   9.953  -0.879  1.00  0.00
ATOM     51  CA  LEU    17       3.653  10.382  -1.155  1.00  0.00
ATOM     52  CB  LEU    17       4.511   9.191  -1.584  1.00  0.00
ATOM     53  CG  LEU    17       5.972   9.494  -1.922  1.00  0.00
ATOM     54  CD1 LEU    17       6.700  10.051  -0.708  1.00  0.00
ATOM     55  CD2 LEU    17       6.693   8.233  -2.371  1.00  0.00
ATOM     56  O   LEU    17       4.306  12.486  -2.110  1.00  0.00
ATOM     57  C   LEU    17       3.710  11.422  -2.270  1.00  0.00
ATOM     58  N   ASP    18       3.088  11.098  -3.398  1.00  0.00
ATOM     59  CA  ASP    18       3.056  11.984  -4.559  1.00  0.00
ATOM     60  CB  ASP    18       2.302  11.324  -5.716  1.00  0.00
ATOM     61  CG  ASP    18       3.089  10.201  -6.359  1.00  0.00
ATOM     62  OD1 ASP    18       4.299  10.085  -6.076  1.00  0.00
ATOM     63  OD2 ASP    18       2.495   9.436  -7.149  1.00  0.00
ATOM     64  O   ASP    18       2.786  14.361  -4.725  1.00  0.00
ATOM     65  C   ASP    18       2.363  13.306  -4.248  1.00  0.00
ATOM     66  N   GLU    19       1.293  13.251  -3.459  1.00  0.00
ATOM     67  CA  GLU    19       0.570  14.469  -3.107  1.00  0.00
ATOM     68  CB  GLU    19      -0.645  14.139  -2.238  1.00  0.00
ATOM     69  CG  GLU    19      -1.768  13.436  -2.981  1.00  0.00
ATOM     70  CD  GLU    19      -2.912  13.040  -2.071  1.00  0.00
ATOM     71  OE1 GLU    19      -2.798  13.252  -0.845  1.00  0.00
ATOM     72  OE2 GLU    19      -3.926  12.517  -2.582  1.00  0.00
ATOM     73  O   GLU    19       1.315  16.627  -2.379  1.00  0.00
ATOM     74  C   GLU    19       1.481  15.411  -2.332  1.00  0.00
ATOM     75  N   LEU    20       2.448  14.842  -1.623  1.00  0.00
ATOM     76  CA  LEU    20       3.394  15.635  -0.847  1.00  0.00
ATOM     77  CB  LEU    20       3.906  14.836   0.352  1.00  0.00
ATOM     78  CG  LEU    20       2.860  14.431   1.393  1.00  0.00
ATOM     79  CD1 LEU    20       3.484  13.561   2.473  1.00  0.00
ATOM     80  CD2 LEU    20       2.260  15.660   2.060  1.00  0.00
ATOM     81  O   LEU    20       5.442  16.826  -1.242  1.00  0.00
ATOM     82  C   LEU    20       4.601  16.044  -1.690  1.00  0.00
ATOM     83  N   ASN    21       4.682  15.509  -2.907  1.00  0.00
ATOM     84  CA  ASN    21       5.795  15.820  -3.787  1.00  0.00
ATOM     85  CB  ASN    21       5.993  17.334  -3.888  1.00  0.00
ATOM     86  CG  ASN    21       4.875  18.019  -4.648  1.00  0.00
ATOM     87  ND2 ASN    21       4.661  19.297  -4.361  1.00  0.00
ATOM     88  OD1 ASN    21       4.213  17.404  -5.485  1.00  0.00
ATOM     89  O   ASN    21       8.179  15.768  -3.555  1.00  0.00
ATOM     90  C   ASN    21       7.106  15.223  -3.302  1.00  0.00
ATOM     91  N   VAL    22       7.016  14.088  -2.615  1.00  0.00
ATOM     92  CA  VAL    22       8.186  13.412  -2.069  1.00  0.00
ATOM     93  CB  VAL    22       7.875  12.752  -0.711  1.00  0.00
ATOM     94  CG1 VAL    22       9.082  11.976  -0.208  1.00  0.00
ATOM     95  CG2 VAL    22       7.514  13.806   0.323  1.00  0.00
ATOM     96  O   VAL    22       7.981  11.612  -3.640  1.00  0.00
ATOM     97  C   VAL    22       8.733  12.304  -2.961  1.00  0.00
ATOM     98  N   SER    23      10.051  12.138  -2.944  1.00  0.00
ATOM     99  CA  SER    23      10.699  11.083  -3.713  1.00  0.00
ATOM    100  CB  SER    23      12.126  11.493  -4.089  1.00  0.00
ATOM    101  OG  SER    23      12.950  11.580  -2.940  1.00  0.00
ATOM    102  O   SER    23      10.443   9.996  -1.593  1.00  0.00
ATOM    103  C   SER    23      10.699   9.866  -2.796  1.00  0.00
ATOM    104  N   LEU    24      10.979   8.686  -3.342  1.00  0.00
ATOM    105  CA  LEU    24      11.009   7.491  -2.508  1.00  0.00
ATOM    106  CB  LEU    24      11.218   6.242  -3.367  1.00  0.00
ATOM    107  CG  LEU    24      10.058   5.848  -4.284  1.00  0.00
ATOM    108  CD1 LEU    24      10.464   4.708  -5.205  1.00  0.00
ATOM    109  CD2 LEU    24       8.856   5.395  -3.468  1.00  0.00
ATOM    110  O   LEU    24      11.992   7.222  -0.339  1.00  0.00
ATOM    111  C   LEU    24      12.147   7.590  -1.503  1.00  0.00
ATOM    112  N   ARG    25      13.286   8.112  -1.950  1.00  0.00
ATOM    113  CA  ARG    25      14.444   8.245  -1.072  1.00  0.00
ATOM    114  CB  ARG    25      15.652   8.763  -1.854  1.00  0.00
ATOM    115  CG  ARG    25      16.242   7.752  -2.825  1.00  0.00
ATOM    116  CD  ARG    25      17.390   8.354  -3.619  1.00  0.00
ATOM    117  NE  ARG    25      17.951   7.403  -4.576  1.00  0.00
ATOM    118  CZ  ARG    25      18.914   7.698  -5.444  1.00  0.00
ATOM    119  NH1 ARG    25      19.361   6.770  -6.278  1.00  0.00
ATOM    120  NH2 ARG    25      19.427   8.921  -5.475  1.00  0.00
ATOM    121  O   ARG    25      14.578   8.984   1.209  1.00  0.00
ATOM    122  C   ARG    25      14.172   9.221   0.070  1.00  0.00
ATOM    123  N   GLU    26      13.487  10.320  -0.231  1.00  0.00
ATOM    124  CA  GLU    26      13.177  11.303   0.799  1.00  0.00
ATOM    125  CB  GLU    26      12.551  12.552   0.175  1.00  0.00
ATOM    126  CG  GLU    26      13.518  13.385  -0.650  1.00  0.00
ATOM    127  CD  GLU    26      12.838  14.544  -1.352  1.00  0.00
ATOM    128  OE1 GLU    26      11.598  14.655  -1.250  1.00  0.00
ATOM    129  OE2 GLU    26      13.545  15.342  -2.003  1.00  0.00
ATOM    130  O   GLU    26      12.254  10.962   2.992  1.00  0.00
ATOM    131  C   GLU    26      12.190  10.695   1.795  1.00  0.00
ATOM    132  N   PHE    27      11.277   9.874   1.288  1.00  0.00
ATOM    133  CA  PHE    27      10.287   9.227   2.139  1.00  0.00
ATOM    134  CB  PHE    27       9.228   8.522   1.288  1.00  0.00
ATOM    135  CG  PHE    27       8.084   7.961   2.084  1.00  0.00
ATOM    136  CD1 PHE    27       7.128   8.799   2.633  1.00  0.00
ATOM    137  CD2 PHE    27       7.965   6.599   2.287  1.00  0.00
ATOM    138  CE1 PHE    27       6.075   8.284   3.365  1.00  0.00
ATOM    139  CE2 PHE    27       6.912   6.083   3.019  1.00  0.00
ATOM    140  CZ  PHE    27       5.970   6.919   3.558  1.00  0.00
ATOM    141  O   PHE    27      10.607   7.979   4.172  1.00  0.00
ATOM    142  C   PHE    27      10.987   8.197   3.021  1.00  0.00
ATOM    143  N   ALA    28      12.027   7.575   2.483  1.00  0.00
ATOM    144  CA  ALA    28      12.788   6.590   3.242  1.00  0.00
ATOM    145  CB  ALA    28      13.864   5.967   2.368  1.00  0.00
ATOM    146  O   ALA    28      13.395   6.771   5.561  1.00  0.00
ATOM    147  C   ALA    28      13.447   7.275   4.439  1.00  0.00
ATOM    148  N   ARG    29      14.053   8.436   4.201  1.00  0.00
ATOM    149  CA  ARG    29      14.725   9.177   5.269  1.00  0.00
ATOM    150  CB  ARG    29      15.408  10.426   4.709  1.00  0.00
ATOM    151  CG  ARG    29      16.632  10.133   3.856  1.00  0.00
ATOM    152  CD  ARG    29      17.216  11.409   3.273  1.00  0.00
ATOM    153  NE  ARG    29      18.378  11.143   2.428  1.00  0.00
ATOM    154  CZ  ARG    29      19.030  12.074   1.740  1.00  0.00
ATOM    155  NH1 ARG    29      20.078  11.740   0.998  1.00  0.00
ATOM    156  NH2 ARG    29      18.635  13.339   1.796  1.00  0.00
ATOM    157  O   ARG    29      14.062   9.574   7.548  1.00  0.00
ATOM    158  C   ARG    29      13.753   9.632   6.354  1.00  0.00
ATOM    159  N   ALA    30      12.579  10.082   5.930  1.00  0.00
ATOM    160  CA  ALA    30      11.558  10.556   6.857  1.00  0.00
ATOM    161  CB  ALA    30      10.393  11.170   6.095  1.00  0.00
ATOM    162  O   ALA    30      10.796   9.651   8.941  1.00  0.00
ATOM    163  C   ALA    30      10.976   9.456   7.739  1.00  0.00
ATOM    164  N   MET    31      10.690   8.307   7.135  1.00  0.00
ATOM    165  CA  MET    31      10.067   7.184   7.836  1.00  0.00
ATOM    166  CB  MET    31       9.215   6.357   6.873  1.00  0.00
ATOM    167  CG  MET    31      10.016   5.609   5.822  1.00  0.00
ATOM    168  SD  MET    31       8.974   4.651   4.704  1.00  0.00
ATOM    169  CE  MET    31       8.434   3.332   5.789  1.00  0.00
ATOM    170  O   MET    31      10.568   5.468   9.422  1.00  0.00
ATOM    171  C   MET    31      10.988   6.170   8.505  1.00  0.00
ATOM    172  N   GLU    32      12.223   6.063   8.034  1.00  0.00
ATOM    173  CA  GLU    32      13.124   5.086   8.610  1.00  0.00
ATOM    174  CB  GLU    32      12.872   4.944  10.113  1.00  0.00
ATOM    175  CG  GLU    32      13.159   6.204  10.911  1.00  0.00
ATOM    176  CD  GLU    32      12.853   6.040  12.386  1.00  0.00
ATOM    177  OE1 GLU    32      11.711   5.658  12.718  1.00  0.00
ATOM    178  OE2 GLU    32      13.753   6.296  13.213  1.00  0.00
ATOM    179  O   GLU    32      13.526   2.738   8.362  1.00  0.00
ATOM    180  C   GLU    32      12.921   3.729   7.957  1.00  0.00
ATOM    181  N   ILE    33      12.045   3.678   6.958  1.00  0.00
ATOM    182  CA  ILE    33      11.784   2.442   6.224  1.00  0.00
ATOM    183  CB  ILE    33      10.296   2.312   5.848  1.00  0.00
ATOM    184  CG1 ILE    33       9.421   2.393   7.100  1.00  0.00
ATOM    185  CG2 ILE    33      10.035   0.981   5.161  1.00  0.00
ATOM    186  CD1 ILE    33       9.712   1.314   8.120  1.00  0.00
ATOM    187  O   ILE    33      12.663   3.543   4.285  1.00  0.00
ATOM    188  C   ILE    33      12.646   2.514   4.963  1.00  0.00
ATOM    189  N   ALA    34      13.367   1.440   4.648  1.00  0.00
ATOM    190  CA  ALA    34      14.243   1.450   3.477  1.00  0.00
ATOM    191  CB  ALA    34      14.860   0.076   3.265  1.00  0.00
ATOM    192  O   ALA    34      12.336   1.501   2.019  1.00  0.00
ATOM    193  C   ALA    34      13.515   1.819   2.193  1.00  0.00
ATOM    194  N   PRO    35      14.228   2.493   1.294  1.00  0.00
ATOM    195  CA  PRO    35      13.658   2.882   0.012  1.00  0.00
ATOM    196  CB  PRO    35      14.789   3.645  -0.680  1.00  0.00
ATOM    197  CG  PRO    35      15.620   4.178   0.438  1.00  0.00
ATOM    198  CD  PRO    35      15.607   3.122   1.508  1.00  0.00
ATOM    199  O   PRO    35      12.277   1.606  -1.488  1.00  0.00
ATOM    200  C   PRO    35      13.258   1.620  -0.738  1.00  0.00
ATOM    201  N   SER    36      14.029   0.559  -0.531  1.00  0.00
ATOM    202  CA  SER    36      13.755  -0.709  -1.189  1.00  0.00
ATOM    203  CB  SER    36      14.811  -1.748  -0.807  1.00  0.00
ATOM    204  OG  SER    36      16.084  -1.396  -1.321  1.00  0.00
ATOM    205  O   SER    36      11.573  -1.602  -1.620  1.00  0.00
ATOM    206  C   SER    36      12.385  -1.232  -0.774  1.00  0.00
ATOM    207  N   THR    37      12.125  -1.258   0.528  1.00  0.00
ATOM    208  CA  THR    37      10.844  -1.748   1.018  1.00  0.00
ATOM    209  CB  THR    37      10.807  -1.791   2.556  1.00  0.00
ATOM    210  CG2 THR    37       9.447  -2.268   3.044  1.00  0.00
ATOM    211  OG1 THR    37      11.812  -2.692   3.037  1.00  0.00
ATOM    212  O   THR    37       8.643  -1.350   0.159  1.00  0.00
ATOM    213  C   THR    37       9.697  -0.854   0.557  1.00  0.00
ATOM    214  N   ALA    38       9.901   0.460   0.612  1.00  0.00
ATOM    215  CA  ALA    38       8.871   1.401   0.174  1.00  0.00
ATOM    216  CB  ALA    38       9.366   2.832   0.316  1.00  0.00
ATOM    217  O   ALA    38       7.343   1.229  -1.676  1.00  0.00
ATOM    218  C   ALA    38       8.511   1.155  -1.291  1.00  0.00
ATOM    219  N   SER    39       9.518   0.857  -2.107  1.00  0.00
ATOM    220  CA  SER    39       9.267   0.588  -3.513  1.00  0.00
ATOM    221  CB  SER    39      10.588   0.400  -4.265  1.00  0.00
ATOM    222  OG  SER    39      11.335   1.602  -4.289  1.00  0.00
ATOM    223  O   SER    39       7.495  -0.712  -4.472  1.00  0.00
ATOM    224  C   SER    39       8.439  -0.675  -3.680  1.00  0.00
ATOM    225  N   ARG    40       8.790  -1.710  -2.924  1.00  0.00
ATOM    226  CA  ARG    40       8.074  -2.982  -2.980  1.00  0.00
ATOM    227  CB  ARG    40       8.736  -4.010  -2.059  1.00  0.00
ATOM    228  CG  ARG    40      10.084  -4.508  -2.552  1.00  0.00
ATOM    229  CD  ARG    40      10.715  -5.468  -1.557  1.00  0.00
ATOM    230  NE  ARG    40      12.026  -5.935  -2.003  1.00  0.00
ATOM    231  CZ  ARG    40      12.822  -6.723  -1.288  1.00  0.00
ATOM    232  NH1 ARG    40      13.997  -7.097  -1.776  1.00  0.00
ATOM    233  NH2 ARG    40      12.441  -7.135  -0.087  1.00  0.00
ATOM    234  O   ARG    40       5.717  -3.423  -3.106  1.00  0.00
ATOM    235  C   ARG    40       6.621  -2.813  -2.538  1.00  0.00
ATOM    236  N   LEU    41       6.397  -1.992  -1.516  1.00  0.00
ATOM    237  CA  LEU    41       5.044  -1.769  -1.029  1.00  0.00
ATOM    238  CB  LEU    41       5.061  -0.879   0.216  1.00  0.00
ATOM    239  CG  LEU    41       3.701  -0.546   0.831  1.00  0.00
ATOM    240  CD1 LEU    41       2.996  -1.811   1.294  1.00  0.00
ATOM    241  CD2 LEU    41       3.864   0.375   2.031  1.00  0.00
ATOM    242  O   LEU    41       3.055  -1.492  -2.344  1.00  0.00
ATOM    243  C   LEU    41       4.192  -1.085  -2.092  1.00  0.00
ATOM    244  N   LEU    42       4.736  -0.046  -2.715  1.00  0.00
ATOM    245  CA  LEU    42       3.991   0.671  -3.740  1.00  0.00
ATOM    246  CB  LEU    42       4.763   1.913  -4.192  1.00  0.00
ATOM    247  CG  LEU    42       4.938   3.019  -3.149  1.00  0.00
ATOM    248  CD1 LEU    42       5.819   4.134  -3.691  1.00  0.00
ATOM    249  CD2 LEU    42       3.591   3.618  -2.770  1.00  0.00
ATOM    250  O   LEU    42       2.806   0.078  -5.734  1.00  0.00
ATOM    251  C   LEU    42       3.737  -0.188  -4.978  1.00  0.00
ATOM    252  N   THR    43       4.555  -1.218  -5.188  1.00  0.00
ATOM    253  CA  THR    43       4.364  -2.102  -6.339  1.00  0.00
ATOM    254  CB  THR    43       5.707  -2.655  -6.855  1.00  0.00
ATOM    255  CG2 THR    43       6.630  -1.518  -7.265  1.00  0.00
ATOM    256  OG1 THR    43       6.340  -3.418  -5.820  1.00  0.00
ATOM    257  O   THR    43       3.187  -4.129  -6.853  1.00  0.00
ATOM    258  C   THR    43       3.484  -3.298  -5.993  1.00  0.00
ATOM    259  N   GLY    44       3.073  -3.383  -4.732  1.00  0.00
ATOM    260  CA  GLY    44       2.235  -4.487  -4.299  1.00  0.00
ATOM    261  O   GLY    44       2.436  -6.871  -4.267  1.00  0.00
ATOM    262  C   GLY    44       3.008  -5.786  -4.159  1.00  0.00
ATOM    263  N   LYS    45       4.306  -5.680  -3.906  1.00  0.00
ATOM    264  CA  LYS    45       5.154  -6.860  -3.765  1.00  0.00
ATOM    265  CB  LYS    45       6.566  -6.569  -4.276  1.00  0.00
ATOM    266  CG  LYS    45       6.642  -6.290  -5.767  1.00  0.00
ATOM    267  CD  LYS    45       8.076  -6.056  -6.214  1.00  0.00
ATOM    268  CE  LYS    45       8.148  -5.751  -7.701  1.00  0.00
ATOM    269  NZ  LYS    45       9.545  -5.488  -8.147  1.00  0.00
ATOM    270  O   LYS    45       5.566  -8.554  -2.127  1.00  0.00
ATOM    271  C   LYS    45       5.317  -7.366  -2.341  1.00  0.00
ATOM    272  N   ALA    46       5.192  -6.477  -1.364  1.00  0.00
ATOM    273  CA  ALA    46       5.330  -6.890   0.024  1.00  0.00
ATOM    274  CB  ALA    46       6.616  -6.334   0.618  1.00  0.00
ATOM    275  O   ALA    46       3.688  -5.265   0.659  1.00  0.00
ATOM    276  C   ALA    46       4.163  -6.386   0.852  1.00  0.00
ATOM    277  N   ALA    47       3.705  -7.227   1.768  1.00  0.00
ATOM    278  CA  ALA    47       2.595  -6.898   2.653  1.00  0.00
ATOM    279  CB  ALA    47       1.813  -8.152   3.013  1.00  0.00
ATOM    280  O   ALA    47       3.766  -6.939   4.751  1.00  0.00
ATOM    281  C   ALA    47       3.142  -6.266   3.929  1.00  0.00
ATOM    282  N   LEU    48       2.915  -4.960   4.112  1.00  0.00
ATOM    283  CA  LEU    48       3.411  -4.279   5.307  1.00  0.00
ATOM    284  CB  LEU    48       3.263  -2.763   5.159  1.00  0.00
ATOM    285  CG  LEU    48       4.090  -2.107   4.051  1.00  0.00
ATOM    286  CD1 LEU    48       3.758  -0.627   3.938  1.00  0.00
ATOM    287  CD2 LEU    48       5.578  -2.241   4.336  1.00  0.00
ATOM    288  O   LEU    48       1.496  -5.001   6.566  1.00  0.00
ATOM    289  C   LEU    48       2.677  -4.667   6.584  1.00  0.00
ATOM    290  N   THR    49       3.399  -4.633   7.693  1.00  0.00
ATOM    291  CA  THR    49       2.810  -4.962   8.980  1.00  0.00
ATOM    292  CB  THR    49       3.872  -5.468   9.974  1.00  0.00
ATOM    293  CG2 THR    49       4.611  -6.666   9.400  1.00  0.00
ATOM    294  OG1 THR    49       4.816  -4.424  10.243  1.00  0.00
ATOM    295  O   THR    49       2.417  -2.594   8.986  1.00  0.00
ATOM    296  C   THR    49       2.173  -3.686   9.510  1.00  0.00
ATOM    297  N   PRO    50       1.352  -3.826  10.542  1.00  0.00
ATOM    298  CA  PRO    50       0.707  -2.676  11.147  1.00  0.00
ATOM    299  CB  PRO    50      -0.147  -3.276  12.265  1.00  0.00
ATOM    300  CG  PRO    50      -0.461  -4.657  11.795  1.00  0.00
ATOM    301  CD  PRO    50       0.778  -5.154  11.105  1.00  0.00
ATOM    302  O   PRO    50       1.671  -0.521  11.587  1.00  0.00
ATOM    303  C   PRO    50       1.792  -1.742  11.673  1.00  0.00
ATOM    304  N   GLU    51       2.865  -2.321  12.199  1.00  0.00
ATOM    305  CA  GLU    51       3.953  -1.515  12.741  1.00  0.00
ATOM    306  CB  GLU    51       5.007  -2.409  13.399  1.00  0.00
ATOM    307  CG  GLU    51       4.544  -3.066  14.690  1.00  0.00
ATOM    308  CD  GLU    51       5.565  -4.039  15.247  1.00  0.00
ATOM    309  OE1 GLU    51       6.604  -4.252  14.586  1.00  0.00
ATOM    310  OE2 GLU    51       5.328  -4.586  16.343  1.00  0.00
ATOM    311  O   GLU    51       5.041   0.452  11.886  1.00  0.00
ATOM    312  C   GLU    51       4.651  -0.698  11.657  1.00  0.00
ATOM    313  N   MET    52       4.806  -1.285  10.476  1.00  0.00
ATOM    314  CA  MET    52       5.460  -0.582   9.379  1.00  0.00
ATOM    315  CB  MET    52       5.725  -1.537   8.213  1.00  0.00
ATOM    316  CG  MET    52       6.804  -2.571   8.492  1.00  0.00
ATOM    317  SD  MET    52       7.070  -3.690   7.103  1.00  0.00
ATOM    318  CE  MET    52       8.368  -4.737   7.756  1.00  0.00
ATOM    319  O   MET    52       5.043   1.649   8.582  1.00  0.00
ATOM    320  C   MET    52       4.561   0.554   8.893  1.00  0.00
ATOM    321  N   ALA    53       3.256   0.290   8.837  1.00  0.00
ATOM    322  CA  ALA    53       2.286   1.302   8.423  1.00  0.00
ATOM    323  CB  ALA    53       0.872   0.748   8.512  1.00  0.00
ATOM    324  O   ALA    53       2.395   3.662   8.837  1.00  0.00
ATOM    325  C   ALA    53       2.384   2.531   9.322  1.00  0.00
ATOM    326  N   ILE    54       2.436   2.315  10.634  1.00  0.00
ATOM    327  CA  ILE    54       2.538   3.439  11.559  1.00  0.00
ATOM    328  CB  ILE    54       2.466   2.972  13.025  1.00  0.00
ATOM    329  CG1 ILE    54       1.072   2.431  13.344  1.00  0.00
ATOM    330  CG2 ILE    54       2.761   4.128  13.967  1.00  0.00
ATOM    331  CD1 ILE    54       0.986   1.710  14.671  1.00  0.00
ATOM    332  O   ILE    54       3.935   5.392  11.454  1.00  0.00
ATOM    333  C   ILE    54       3.861   4.168  11.358  1.00  0.00
ATOM    334  N   LYS    55       4.908   3.407  11.073  1.00  0.00
ATOM    335  CA  LYS    55       6.215   3.995  10.861  1.00  0.00
ATOM    336  CB  LYS    55       7.258   2.906  10.596  1.00  0.00
ATOM    337  CG  LYS    55       7.591   2.058  11.812  1.00  0.00
ATOM    338  CD  LYS    55       8.631   1.001  11.478  1.00  0.00
ATOM    339  CE  LYS    55       8.948   0.136  12.689  1.00  0.00
ATOM    340  NZ  LYS    55       9.940  -0.926  12.368  1.00  0.00
ATOM    341  O   LYS    55       6.702   6.045   9.702  1.00  0.00
ATOM    342  C   LYS    55       6.169   4.937   9.658  1.00  0.00
ATOM    343  N   LEU    56       5.521   4.493   8.588  1.00  0.00
ATOM    344  CA  LEU    56       5.405   5.294   7.374  1.00  0.00
ATOM    345  CB  LEU    56       4.796   4.466   6.241  1.00  0.00
ATOM    346  CG  LEU    56       5.668   3.344   5.675  1.00  0.00
ATOM    347  CD1 LEU    56       4.877   2.489   4.698  1.00  0.00
ATOM    348  CD2 LEU    56       6.870   3.918   4.939  1.00  0.00
ATOM    349  O   LEU    56       4.892   7.635   7.251  1.00  0.00
ATOM    350  C   LEU    56       4.518   6.511   7.604  1.00  0.00
ATOM    351  N   SER    57       3.342   6.292   8.191  1.00  0.00
ATOM    352  CA  SER    57       2.422   7.392   8.469  1.00  0.00
ATOM    353  CB  SER    57       1.198   6.887   9.237  1.00  0.00
ATOM    354  OG  SER    57       0.425   6.008   8.439  1.00  0.00
ATOM    355  O   SER    57       3.018   9.654   9.039  1.00  0.00
ATOM    356  C   SER    57       3.124   8.454   9.310  1.00  0.00
ATOM    357  N   VAL    58       3.860   8.011  10.324  1.00  0.00
ATOM    358  CA  VAL    58       4.569   8.935  11.204  1.00  0.00
ATOM    359  CB  VAL    58       5.380   8.184  12.275  1.00  0.00
ATOM    360  CG1 VAL    58       6.263   9.151  13.049  1.00  0.00
ATOM    361  CG2 VAL    58       4.451   7.488  13.258  1.00  0.00
ATOM    362  O   VAL    58       5.601  11.028  10.640  1.00  0.00
ATOM    363  C   VAL    58       5.547   9.816  10.431  1.00  0.00
ATOM    364  N   VAL    59       6.310   9.205   9.531  1.00  0.00
ATOM    365  CA  VAL    59       7.274   9.961   8.745  1.00  0.00
ATOM    366  CB  VAL    59       8.150   9.033   7.882  1.00  0.00
ATOM    367  CG1 VAL    59       7.335   8.442   6.741  1.00  0.00
ATOM    368  CG2 VAL    59       9.320   9.802   7.289  1.00  0.00
ATOM    369  O   VAL    59       7.171  12.015   7.514  1.00  0.00
ATOM    370  C   VAL    59       6.622  10.946   7.795  1.00  0.00
ATOM    371  N   ILE    60       5.443  10.591   7.301  1.00  0.00
ATOM    372  CA  ILE    60       4.706  11.449   6.375  1.00  0.00
ATOM    373  CB  ILE    60       3.795  10.626   5.446  1.00  0.00
ATOM    374  CG1 ILE    60       2.705   9.919   6.255  1.00  0.00
ATOM    375  CG2 ILE    60       4.605   9.572   4.704  1.00  0.00
ATOM    376  CD1 ILE    60       1.644   9.258   5.403  1.00  0.00
ATOM    377  O   ILE    60       3.188  13.295   6.521  1.00  0.00
ATOM    378  C   ILE    60       3.824  12.434   7.129  1.00  0.00
ATOM    379  N   GLY    61       3.801  12.301   8.454  1.00  0.00
ATOM    380  CA  GLY    61       2.981  13.142   9.319  1.00  0.00
ATOM    381  O   GLY    61       0.807  14.009   8.726  1.00  0.00
ATOM    382  C   GLY    61       1.526  13.017   8.889  1.00  0.00
ATOM    383  N   SER    62       1.117  11.770   8.692  1.00  0.00
ATOM    384  CA  SER    62      -0.241  11.438   8.287  1.00  0.00
ATOM    385  CB  SER    62      -0.235  10.711   6.941  1.00  0.00
ATOM    386  OG  SER    62      -1.548  10.339   6.556  1.00  0.00
ATOM    387  O   SER    62      -0.136   9.960  10.173  1.00  0.00
ATOM    388  C   SER    62      -0.850  10.536   9.350  1.00  0.00
ATOM    389  N   SER    63      -2.171  10.416   9.334  1.00  0.00
ATOM    390  CA  SER    63      -2.854   9.566  10.300  1.00  0.00
ATOM    391  CB  SER    63      -4.298  10.032  10.496  1.00  0.00
ATOM    392  OG  SER    63      -4.343  11.349  11.019  1.00  0.00
ATOM    393  O   SER    63      -2.564   7.932   8.581  1.00  0.00
ATOM    394  C   SER    63      -2.840   8.144   9.758  1.00  0.00
TER
END



