
PFRMAT TS
TARGET T0314
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0314 model 3 Fri Jun  2 18:34:40 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  3
PARENT N/A
ATOM      2  N   ARG    27      -4.525 -12.484 -20.579  1.00  0.00
ATOM      3  CA  ARG    27      -4.083 -11.121 -20.345  1.00  0.00
ATOM      4  CB  ARG    27      -4.881 -10.143 -21.211  1.00  0.00
ATOM      5  CG  ARG    27      -4.601 -10.262 -22.699  1.00  0.00
ATOM      6  CD  ARG    27      -5.492  -9.331 -23.505  1.00  0.00
ATOM      7  NE  ARG    27      -6.901  -9.706 -23.411  1.00  0.00
ATOM      8  CZ  ARG    27      -7.908  -8.939 -23.815  1.00  0.00
ATOM      9  NH1 ARG    27      -9.157  -9.362 -23.688  1.00  0.00
ATOM     10  NH2 ARG    27      -7.662  -7.748 -24.345  1.00  0.00
ATOM     11  O   ARG    27      -5.084 -11.581 -18.222  1.00  0.00
ATOM     12  C   ARG    27      -4.325 -10.860 -18.871  1.00  0.00
ATOM     13  N   TYR    28      -3.680  -9.830 -18.341  1.00  0.00
ATOM     14  CA  TYR    28      -3.873  -9.493 -16.946  1.00  0.00
ATOM     15  CB  TYR    28      -2.699 -10.002 -16.105  1.00  0.00
ATOM     16  CG  TYR    28      -1.379  -9.341 -16.434  1.00  0.00
ATOM     17  CD1 TYR    28      -0.954  -8.217 -15.737  1.00  0.00
ATOM     18  CD2 TYR    28      -0.564  -9.842 -17.439  1.00  0.00
ATOM     19  CE1 TYR    28       0.250  -7.606 -16.028  1.00  0.00
ATOM     20  CE2 TYR    28       0.645  -9.244 -17.744  1.00  0.00
ATOM     21  CZ  TYR    28       1.047  -8.117 -17.029  1.00  0.00
ATOM     22  OH  TYR    28       2.248  -7.510 -17.323  1.00  0.00
ATOM     23  O   TYR    28      -3.500  -7.199 -17.584  1.00  0.00
ATOM     24  C   TYR    28      -3.974  -7.987 -16.757  1.00  0.00
ATOM     25  N   ILE    29      -4.612  -7.606 -15.661  1.00  0.00
ATOM     26  CA  ILE    29      -4.775  -6.216 -15.298  1.00  0.00
ATOM     27  CB  ILE    29      -6.248  -5.777 -15.392  1.00  0.00
ATOM     28  CG1 ILE    29      -6.779  -5.992 -16.811  1.00  0.00
ATOM     29  CG2 ILE    29      -6.389  -4.305 -15.043  1.00  0.00
ATOM     30  CD1 ILE    29      -8.267  -5.753 -16.949  1.00  0.00
ATOM     31  O   ILE    29      -4.976  -6.492 -12.925  1.00  0.00
ATOM     32  C   ILE    29      -4.280  -6.107 -13.872  1.00  0.00
ATOM     33  N   VAL    30      -3.058  -5.611 -13.695  1.00  0.00
ATOM     34  CA  VAL    30      -2.557  -5.492 -12.332  1.00  0.00
ATOM     35  CB  VAL    30      -1.027  -5.318 -12.306  1.00  0.00
ATOM     36  CG1 VAL    30      -0.543  -5.074 -10.885  1.00  0.00
ATOM     37  CG2 VAL    30      -0.341  -6.564 -12.841  1.00  0.00
ATOM     38  O   VAL    30      -3.381  -3.247 -12.202  1.00  0.00
ATOM     39  C   VAL    30      -3.155  -4.298 -11.609  1.00  0.00
ATOM     40  N   ARG    31      -3.443  -4.482 -10.331  1.00  0.00
ATOM     41  CA  ARG    31      -3.935  -3.399  -9.510  1.00  0.00
ATOM     42  CB  ARG    31      -5.178  -3.836  -8.733  1.00  0.00
ATOM     43  CG  ARG    31      -5.824  -2.725  -7.920  1.00  0.00
ATOM     44  CD  ARG    31      -7.090  -3.209  -7.231  1.00  0.00
ATOM     45  NE  ARG    31      -7.742  -2.145  -6.472  1.00  0.00
ATOM     46  CZ  ARG    31      -8.791  -2.330  -5.678  1.00  0.00
ATOM     47  NH1 ARG    31      -9.318  -1.303  -5.026  1.00  0.00
ATOM     48  NH2 ARG    31      -9.311  -3.543  -5.536  1.00  0.00
ATOM     49  O   ARG    31      -2.277  -4.035  -7.915  1.00  0.00
ATOM     50  C   ARG    31      -2.738  -3.133  -8.610  1.00  0.00
ATOM     51  N   PHE    32      -2.194  -1.924  -8.652  1.00  0.00
ATOM     52  CA  PHE    32      -1.068  -1.612  -7.785  1.00  0.00
ATOM     53  CB  PHE    32      -0.250  -0.454  -8.361  1.00  0.00
ATOM     54  CG  PHE    32       1.028  -0.184  -7.619  1.00  0.00
ATOM     55  CD1 PHE    32       2.153  -0.958  -7.843  1.00  0.00
ATOM     56  CD2 PHE    32       1.103   0.845  -6.696  1.00  0.00
ATOM     57  CE1 PHE    32       3.327  -0.709  -7.158  1.00  0.00
ATOM     58  CE2 PHE    32       2.278   1.094  -6.012  1.00  0.00
ATOM     59  CZ  PHE    32       3.386   0.322  -6.240  1.00  0.00
ATOM     60  O   PHE    32      -2.078  -0.090  -6.232  1.00  0.00
ATOM     61  C   PHE    32      -1.719  -1.240  -6.469  1.00  0.00
ATOM     62  N   SER    33      -1.883  -2.246  -5.618  1.00  0.00
ATOM     63  CA  SER    33      -2.566  -2.067  -4.350  1.00  0.00
ATOM     64  CB  SER    33      -3.074  -3.409  -3.821  1.00  0.00
ATOM     65  OG  SER    33      -4.005  -3.992  -4.715  1.00  0.00
ATOM     66  O   SER    33      -1.104  -2.191  -2.454  1.00  0.00
ATOM     67  C   SER    33      -1.745  -1.475  -3.220  1.00  0.00
ATOM     68  N   GLU    34      -1.799  -0.153  -3.117  1.00  0.00
ATOM     69  CA  GLU    34      -1.082   0.572  -2.082  1.00  0.00
ATOM     70  CB  GLU    34      -0.723   1.979  -2.564  1.00  0.00
ATOM     71  CG  GLU    34       0.292   2.007  -3.696  1.00  0.00
ATOM     72  CD  GLU    34       0.675   3.417  -4.099  1.00  0.00
ATOM     73  OE1 GLU    34       0.182   4.372  -3.462  1.00  0.00
ATOM     74  OE2 GLU    34       1.467   3.567  -5.052  1.00  0.00
ATOM     75  O   GLU    34      -1.763   1.635  -0.049  1.00  0.00
ATOM     76  C   GLU    34      -1.933   0.701  -0.826  1.00  0.00
ATOM     77  N   ASP    35      -2.861  -0.229  -0.636  1.00  0.00
ATOM     78  CA  ASP    35      -3.696  -0.222   0.559  1.00  0.00
ATOM     79  CB  ASP    35      -5.169  -0.052   0.181  1.00  0.00
ATOM     80  CG  ASP    35      -5.455   1.291  -0.460  1.00  0.00
ATOM     81  OD1 ASP    35      -5.051   2.323   0.116  1.00  0.00
ATOM     82  OD2 ASP    35      -6.084   1.312  -1.539  1.00  0.00
ATOM     83  O   ASP    35      -2.840  -2.451   0.802  1.00  0.00
ATOM     84  C   ASP    35      -3.511  -1.549   1.292  1.00  0.00
ATOM     85  N   SER    36      -4.109  -1.669   2.466  1.00  0.00
ATOM     86  CA  SER    36      -3.979  -2.886   3.250  1.00  0.00
ATOM     87  CB  SER    36      -4.207  -2.592   4.734  1.00  0.00
ATOM     88  OG  SER    36      -5.549  -2.209   4.979  1.00  0.00
ATOM     89  O   SER    36      -6.106  -3.657   2.446  1.00  0.00
ATOM     90  C   SER    36      -4.980  -3.960   2.846  1.00  0.00
ATOM     91  N   PHE    37      -4.550  -5.215   2.937  1.00  0.00
ATOM     92  CA  PHE    37      -5.407  -6.356   2.630  1.00  0.00
ATOM     93  CB  PHE    37      -4.657  -7.370   1.763  1.00  0.00
ATOM     94  CG  PHE    37      -4.334  -6.868   0.385  1.00  0.00
ATOM     95  CD1 PHE    37      -3.145  -6.205   0.136  1.00  0.00
ATOM     96  CD2 PHE    37      -5.219  -7.061  -0.662  1.00  0.00
ATOM     97  CE1 PHE    37      -2.847  -5.743  -1.132  1.00  0.00
ATOM     98  CE2 PHE    37      -4.920  -6.600  -1.931  1.00  0.00
ATOM     99  CZ  PHE    37      -3.741  -5.943  -2.168  1.00  0.00
ATOM    100  O   PHE    37      -4.912  -7.378   4.721  1.00  0.00
ATOM    101  C   PHE    37      -5.786  -6.967   3.964  1.00  0.00
ATOM    102  N   GLY    38      -7.077  -7.034   4.253  1.00  0.00
ATOM    103  CA  GLY    38      -7.505  -7.609   5.514  1.00  0.00
ATOM    104  O   GLY    38      -7.615  -5.454   6.523  1.00  0.00
ATOM    105  C   GLY    38      -8.151  -6.550   6.379  1.00  0.00
ATOM    106  N   MET    39      -9.305  -6.872   6.954  1.00  0.00
ATOM    107  CA  MET    39     -10.005  -5.906   7.782  1.00  0.00
ATOM    108  CB  MET    39      -9.132  -4.672   8.023  1.00  0.00
ATOM    109  CG  MET    39      -7.911  -4.936   8.888  1.00  0.00
ATOM    110  SD  MET    39      -8.338  -5.542  10.530  1.00  0.00
ATOM    111  CE  MET    39      -9.109  -4.088  11.238  1.00  0.00
ATOM    112  O   MET    39     -12.283  -5.152   7.790  1.00  0.00
ATOM    113  C   MET    39     -11.295  -5.452   7.116  1.00  0.00
ATOM    114  N   ASP    40     -11.282  -5.398   5.786  1.00  0.00
ATOM    115  CA  ASP    40     -12.460  -5.000   5.021  1.00  0.00
ATOM    116  CB  ASP    40     -12.062  -4.581   3.605  1.00  0.00
ATOM    117  CG  ASP    40     -11.358  -3.237   3.572  1.00  0.00
ATOM    118  OD1 ASP    40     -11.403  -2.518   4.592  1.00  0.00
ATOM    119  OD2 ASP    40     -10.763  -2.904   2.525  1.00  0.00
ATOM    120  O   ASP    40     -13.060  -7.311   5.251  1.00  0.00
ATOM    121  C   ASP    40     -13.426  -6.177   4.938  1.00  0.00
ATOM    122  N   VAL    41     -14.659  -5.906   4.517  1.00  0.00
ATOM    123  CA  VAL    41     -15.666  -6.954   4.402  1.00  0.00
ATOM    124  CB  VAL    41     -17.020  -6.386   3.939  1.00  0.00
ATOM    125  CG1 VAL    41     -18.026  -7.508   3.731  1.00  0.00
ATOM    126  CG2 VAL    41     -17.579  -5.426   4.979  1.00  0.00
ATOM    127  O   VAL    41     -14.943  -7.712   2.232  1.00  0.00
ATOM    128  C   VAL    41     -15.245  -8.020   3.387  1.00  0.00
ATOM    129  N   ALA    42     -15.212  -9.273   3.835  1.00  0.00
ATOM    130  CA  ALA    42     -14.843 -10.370   2.956  1.00  0.00
ATOM    131  CB  ALA    42     -15.506 -10.208   1.598  1.00  0.00
ATOM    132  O   ALA    42     -12.973 -11.211   1.721  1.00  0.00
ATOM    133  C   ALA    42     -13.356 -10.522   2.670  1.00  0.00
ATOM    134  N   ASP    43     -12.518  -9.887   3.484  1.00  0.00
ATOM    135  CA  ASP    43     -11.071  -9.972   3.304  1.00  0.00
ATOM    136  CB  ASP    43     -10.384  -8.737   3.888  1.00  0.00
ATOM    137  CG  ASP    43     -10.621  -7.490   3.058  1.00  0.00
ATOM    138  OD1 ASP    43     -11.061  -7.626   1.896  1.00  0.00
ATOM    139  OD2 ASP    43     -10.368  -6.379   3.568  1.00  0.00
ATOM    140  O   ASP    43     -10.627 -11.383   5.213  1.00  0.00
ATOM    141  C   ASP    43     -10.491 -11.205   3.998  1.00  0.00
ATOM    142  N   ASP    44      -9.846 -12.050   3.201  1.00  0.00
ATOM    143  CA  ASP    44      -9.231 -13.286   3.670  1.00  0.00
ATOM    144  CB  ASP    44      -9.779 -14.485   2.894  1.00  0.00
ATOM    145  CG  ASP    44      -9.317 -15.810   3.467  1.00  0.00
ATOM    146  OD1 ASP    44      -8.826 -15.822   4.615  1.00  0.00
ATOM    147  OD2 ASP    44      -9.447 -16.838   2.768  1.00  0.00
ATOM    148  O   ASP    44      -7.116 -13.933   2.702  1.00  0.00
ATOM    149  C   ASP    44      -7.724 -13.157   3.444  1.00  0.00
ATOM    150  N   SER    45      -7.133 -12.162   4.097  1.00  0.00
ATOM    151  CA  SER    45      -5.709 -11.875   3.958  1.00  0.00
ATOM    152  CB  SER    45      -5.426 -11.215   2.608  1.00  0.00
ATOM    153  OG  SER    45      -5.997  -9.920   2.542  1.00  0.00
ATOM    154  O   SER    45      -6.033 -10.446   5.872  1.00  0.00
ATOM    155  C   SER    45      -5.240 -10.933   5.060  1.00  0.00
ATOM    156  N   ILE    46      -3.939 -10.668   5.062  1.00  0.00
ATOM    157  CA  ILE    46      -3.338  -9.769   6.030  1.00  0.00
ATOM    158  CB  ILE    46      -2.995 -10.500   7.342  1.00  0.00
ATOM    159  CG1 ILE    46      -4.267 -11.041   7.999  1.00  0.00
ATOM    160  CG2 ILE    46      -2.314  -9.552   8.316  1.00  0.00
ATOM    161  CD1 ILE    46      -4.004 -11.948   9.181  1.00  0.00
ATOM    162  O   ILE    46      -0.961  -9.711   5.673  1.00  0.00
ATOM    163  C   ILE    46      -2.057  -9.195   5.441  1.00  0.00
ATOM    164  N   THR    47      -2.201  -8.125   4.671  1.00  0.00
ATOM    165  CA  THR    47      -1.055  -7.484   4.048  1.00  0.00
ATOM    166  CB  THR    47      -1.005  -7.763   2.536  1.00  0.00
ATOM    167  CG2 THR    47       0.290  -7.232   1.939  1.00  0.00
ATOM    168  OG1 THR    47      -1.078  -9.175   2.304  1.00  0.00
ATOM    169  O   THR    47      -1.612  -5.247   3.388  1.00  0.00
ATOM    170  C   THR    47      -1.113  -5.973   4.244  1.00  0.00
ATOM    171  N   PRO    48      -0.623  -5.484   5.389  1.00  0.00
ATOM    172  CA  PRO    48      -0.636  -4.043   5.646  1.00  0.00
ATOM    173  CB  PRO    48      -0.331  -3.932   7.141  1.00  0.00
ATOM    174  CG  PRO    48       0.477  -5.147   7.450  1.00  0.00
ATOM    175  CD  PRO    48      -0.077  -6.247   6.586  1.00  0.00
ATOM    176  O   PRO    48       1.307  -4.122   4.269  1.00  0.00
ATOM    177  C   PRO    48       0.437  -3.418   4.774  1.00  0.00
ATOM    178  N   THR    49       0.380  -2.108   4.580  1.00  0.00
ATOM    179  CA  THR    49       1.394  -1.459   3.765  1.00  0.00
ATOM    180  CB  THR    49       1.008  -0.006   3.434  1.00  0.00
ATOM    181  CG2 THR    49      -0.326   0.038   2.704  1.00  0.00
ATOM    182  OG1 THR    49       0.897   0.750   4.647  1.00  0.00
ATOM    183  O   THR    49       2.669  -1.638   5.788  1.00  0.00
ATOM    184  C   THR    49       2.695  -1.477   4.571  1.00  0.00
ATOM    185  N   SER    50       3.846  -1.329   3.900  1.00  0.00
ATOM    186  CA  SER    50       5.156  -1.336   4.563  1.00  0.00
ATOM    187  CB  SER    50       6.220  -0.720   3.654  1.00  0.00
ATOM    188  OG  SER    50       7.488  -0.709   4.287  1.00  0.00
ATOM    189  O   SER    50       4.781   0.629   5.909  1.00  0.00
ATOM    190  C   SER    50       5.168  -0.542   5.872  1.00  0.00
ATOM    191  N   GLU    51       5.617  -1.190   6.940  1.00  0.00
ATOM    192  CA  GLU    51       5.659  -0.572   8.258  1.00  0.00
ATOM    193  CB  GLU    51       6.169  -1.569   9.301  1.00  0.00
ATOM    194  CG  GLU    51       5.188  -2.684   9.625  1.00  0.00
ATOM    195  CD  GLU    51       5.762  -3.703  10.589  1.00  0.00
ATOM    196  OE1 GLU    51       6.952  -3.574  10.951  1.00  0.00
ATOM    197  OE2 GLU    51       5.025  -4.630  10.984  1.00  0.00
ATOM    198  O   GLU    51       6.274   1.576   9.096  1.00  0.00
ATOM    199  C   GLU    51       6.565   0.647   8.351  1.00  0.00
ATOM    200  N   PHE    52       7.660   0.644   7.600  1.00  0.00
ATOM    201  CA  PHE    52       8.605   1.753   7.635  1.00  0.00
ATOM    202  CB  PHE    52       9.832   1.441   6.776  1.00  0.00
ATOM    203  CG  PHE    52      10.779   0.459   7.407  1.00  0.00
ATOM    204  CD1 PHE    52      10.805  -0.861   6.994  1.00  0.00
ATOM    205  CD2 PHE    52      11.643   0.858   8.411  1.00  0.00
ATOM    206  CE1 PHE    52      11.676  -1.764   7.574  1.00  0.00
ATOM    207  CE2 PHE    52      12.514  -0.044   8.991  1.00  0.00
ATOM    208  CZ  PHE    52      12.533  -1.350   8.576  1.00  0.00
ATOM    209  O   PHE    52       8.511   4.150   7.534  1.00  0.00
ATOM    210  C   PHE    52       8.057   3.084   7.119  1.00  0.00
ATOM    211  N   VAL    53       7.085   3.028   6.217  1.00  0.00
ATOM    212  CA  VAL    53       6.518   4.249   5.665  1.00  0.00
ATOM    213  CB  VAL    53       5.357   3.946   4.700  1.00  0.00
ATOM    214  CG1 VAL    53       4.656   5.231   4.289  1.00  0.00
ATOM    215  CG2 VAL    53       5.874   3.259   3.445  1.00  0.00
ATOM    216  O   VAL    53       5.971   6.390   6.616  1.00  0.00
ATOM    217  C   VAL    53       5.966   5.170   6.760  1.00  0.00
ATOM    218  N   TRP    54       5.502   4.586   7.857  1.00  0.00
ATOM    219  CA  TRP    54       4.935   5.370   8.951  1.00  0.00
ATOM    220  CB  TRP    54       4.287   4.451   9.988  1.00  0.00
ATOM    221  CG  TRP    54       3.021   3.807   9.512  1.00  0.00
ATOM    222  CD1 TRP    54       2.379   4.038   8.330  1.00  0.00
ATOM    223  CD2 TRP    54       2.245   2.824  10.205  1.00  0.00
ATOM    224  CE2 TRP    54       1.145   2.505   9.384  1.00  0.00
ATOM    225  CE3 TRP    54       2.370   2.180  11.440  1.00  0.00
ATOM    226  NE1 TRP    54       1.249   3.260   8.244  1.00  0.00
ATOM    227  CZ2 TRP    54       0.178   1.572   9.757  1.00  0.00
ATOM    228  CZ3 TRP    54       1.409   1.257  11.807  1.00  0.00
ATOM    229  CH2 TRP    54       0.327   0.959  10.971  1.00  0.00
ATOM    230  O   TRP    54       5.580   7.212  10.352  1.00  0.00
ATOM    231  C   TRP    54       5.950   6.226   9.710  1.00  0.00
ATOM    232  N   SER    55       7.224   5.855   9.635  1.00  0.00
ATOM    233  CA  SER    55       8.267   6.592  10.340  1.00  0.00
ATOM    234  CB  SER    55       9.485   5.700  10.582  1.00  0.00
ATOM    235  OG  SER    55      10.112   5.350   9.361  1.00  0.00
ATOM    236  O   SER    55       9.608   8.548  10.097  1.00  0.00
ATOM    237  C   SER    55       8.763   7.813   9.593  1.00  0.00
ATOM    238  N   SER    56       8.244   8.036   8.394  1.00  0.00
ATOM    239  CA  SER    56       8.671   9.182   7.610  1.00  0.00
ATOM    240  CB  SER    56       8.172   9.062   6.169  1.00  0.00
ATOM    241  OG  SER    56       6.759   9.149   6.109  1.00  0.00
ATOM    242  O   SER    56       8.588  11.576   7.678  1.00  0.00
ATOM    243  C   SER    56       8.159  10.518   8.141  1.00  0.00
ATOM    244  N   VAL    57       7.248  10.467   9.110  1.00  0.00
ATOM    245  CA  VAL    57       6.677  11.676   9.703  1.00  0.00
ATOM    246  CB  VAL    57       5.278  11.977   9.134  1.00  0.00
ATOM    247  CG1 VAL    57       5.360  12.258   7.641  1.00  0.00
ATOM    248  CG2 VAL    57       4.349  10.792   9.351  1.00  0.00
ATOM    249  O   VAL    57       6.328  10.440  11.739  1.00  0.00
ATOM    250  C   VAL    57       6.538  11.536  11.217  1.00  0.00
ATOM    251  N   ARG    58       6.649  12.660  11.914  1.00  0.00
ATOM    252  CA  ARG    58       6.527  12.678  13.362  1.00  0.00
ATOM    253  CB  ARG    58       7.580  13.603  13.977  1.00  0.00
ATOM    254  CG  ARG    58       9.014  13.153  13.745  1.00  0.00
ATOM    255  CD  ARG    58      10.005  14.167  14.290  1.00  0.00
ATOM    256  NE  ARG    58      11.388  13.775  14.028  1.00  0.00
ATOM    257  CZ  ARG    58      12.440  14.558  14.245  1.00  0.00
ATOM    258  NH1 ARG    58      13.661  14.116  13.976  1.00  0.00
ATOM    259  NH2 ARG    58      12.268  15.780  14.730  1.00  0.00
ATOM    260  O   ARG    58       4.662  12.946  14.848  1.00  0.00
ATOM    261  C   ARG    58       5.139  13.181  13.738  1.00  0.00
ATOM    262  N   ASP    59       4.495  13.881  12.810  1.00  0.00
ATOM    263  CA  ASP    59       3.157  14.400  13.052  1.00  0.00
ATOM    264  CB  ASP    59       2.877  15.602  12.148  1.00  0.00
ATOM    265  CG  ASP    59       2.803  15.223  10.681  1.00  0.00
ATOM    266  OD1 ASP    59       2.802  14.012  10.380  1.00  0.00
ATOM    267  OD2 ASP    59       2.746  16.139   9.833  1.00  0.00
ATOM    268  O   ASP    59       2.477  12.132  12.679  1.00  0.00
ATOM    269  C   ASP    59       2.132  13.309  12.760  1.00  0.00
ATOM    270  N   ASP    60       0.873  13.704  12.606  1.00  0.00
ATOM    271  CA  ASP    60      -0.183  12.744  12.316  1.00  0.00
ATOM    272  CB  ASP    60      -1.328  12.886  13.320  1.00  0.00
ATOM    273  CG  ASP    60      -1.953  14.267  13.297  1.00  0.00
ATOM    274  OD1 ASP    60      -1.406  15.157  12.614  1.00  0.00
ATOM    275  OD2 ASP    60      -2.991  14.459  13.964  1.00  0.00
ATOM    276  O   ASP    60      -1.923  12.830  10.664  1.00  0.00
ATOM    277  C   ASP    60      -0.728  12.986  10.911  1.00  0.00
ATOM    278  N   VAL    61       0.170  13.346   9.995  1.00  0.00
ATOM    279  CA  VAL    61      -0.199  13.634   8.616  1.00  0.00
ATOM    280  CB  VAL    61       0.878  14.475   7.908  1.00  0.00
ATOM    281  CG1 VAL    61       2.084  13.615   7.564  1.00  0.00
ATOM    282  CG2 VAL    61       0.329  15.069   6.620  1.00  0.00
ATOM    283  O   VAL    61      -1.097  12.499   6.692  1.00  0.00
ATOM    284  C   VAL    61      -0.407  12.416   7.716  1.00  0.00
ATOM    285  N   MET    62       0.181  11.289   8.097  1.00  0.00
ATOM    286  CA  MET    62       0.098  10.071   7.301  1.00  0.00
ATOM    287  CB  MET    62       1.237   9.115   7.663  1.00  0.00
ATOM    288  CG  MET    62       2.619   9.627   7.293  1.00  0.00
ATOM    289  SD  MET    62       2.782   9.976   5.532  1.00  0.00
ATOM    290  CE  MET    62       2.669   8.326   4.846  1.00  0.00
ATOM    291  O   MET    62      -1.489   8.474   6.499  1.00  0.00
ATOM    292  C   MET    62      -1.163   9.224   7.421  1.00  0.00
ATOM    293  N   ARG    63      -1.873   9.328   8.536  1.00  0.00
ATOM    294  CA  ARG    63      -3.058   8.506   8.718  1.00  0.00
ATOM    295  CB  ARG    63      -2.915   7.628   9.963  1.00  0.00
ATOM    296  CG  ARG    63      -1.718   6.692   9.927  1.00  0.00
ATOM    297  CD  ARG    63      -1.866   5.650   8.829  1.00  0.00
ATOM    298  NE  ARG    63      -2.996   4.757   9.071  1.00  0.00
ATOM    299  CZ  ARG    63      -3.560   3.997   8.137  1.00  0.00
ATOM    300  NH1 ARG    63      -4.584   3.215   8.449  1.00  0.00
ATOM    301  NH2 ARG    63      -3.100   4.022   6.894  1.00  0.00
ATOM    302  O   ARG    63      -4.403  10.493   8.733  1.00  0.00
ATOM    303  C   ARG    63      -4.364   9.277   8.897  1.00  0.00
ATOM    304  N   LEU    64      -5.435   8.549   9.207  1.00  0.00
ATOM    305  CA  LEU    64      -6.754   9.146   9.389  1.00  0.00
ATOM    306  CB  LEU    64      -7.794   8.417   8.536  1.00  0.00
ATOM    307  CG  LEU    64      -7.525   8.372   7.031  1.00  0.00
ATOM    308  CD1 LEU    64      -8.582   7.537   6.322  1.00  0.00
ATOM    309  CD2 LEU    64      -7.549   9.772   6.438  1.00  0.00
ATOM    310  O   LEU    64      -6.696   8.257  11.607  1.00  0.00
ATOM    311  C   LEU    64      -7.197   9.071  10.834  1.00  0.00
ATOM    312  N   GLY    65      -8.161   9.914  11.180  1.00  0.00
ATOM    313  CA  GLY    65      -8.718   9.962  12.523  1.00  0.00
ATOM    314  O   GLY    65     -10.439  11.430  11.743  1.00  0.00
ATOM    315  C   GLY    65     -10.164  10.407  12.366  1.00  0.00
ATOM    316  N   ARG    66     -11.084   9.635  12.931  1.00  0.00
ATOM    317  CA  ARG    66     -12.510   9.931  12.817  1.00  0.00
ATOM    318  CB  ARG    66     -13.336   8.655  12.995  1.00  0.00
ATOM    319  CG  ARG    66     -13.101   7.609  11.916  1.00  0.00
ATOM    320  CD  ARG    66     -13.943   6.367  12.162  1.00  0.00
ATOM    321  NE  ARG    66     -13.689   5.330  11.164  1.00  0.00
ATOM    322  CZ  ARG    66     -14.163   4.090  11.239  1.00  0.00
ATOM    323  NH1 ARG    66     -13.880   3.213  10.286  1.00  0.00
ATOM    324  NH2 ARG    66     -14.919   3.730  12.268  1.00  0.00
ATOM    325  O   ARG    66     -12.374  11.358  14.743  1.00  0.00
ATOM    326  C   ARG    66     -13.062  10.919  13.826  1.00  0.00
ATOM    327  N   GLU    67     -14.338  11.241  13.634  1.00  0.00
ATOM    328  CA  GLU    67     -15.066  12.148  14.503  1.00  0.00
ATOM    329  CB  GLU    67     -16.564  12.089  14.201  1.00  0.00
ATOM    330  CG  GLU    67     -16.943  12.629  12.831  1.00  0.00
ATOM    331  CD  GLU    67     -18.426  12.501  12.544  1.00  0.00
ATOM    332  OE1 GLU    67     -19.153  11.956  13.402  1.00  0.00
ATOM    333  OE2 GLU    67     -18.863  12.946  11.461  1.00  0.00
ATOM    334  O   GLU    67     -14.729  12.650  16.817  1.00  0.00
ATOM    335  C   GLU    67     -14.861  11.781  15.964  1.00  0.00
TER
END



