
PFRMAT TS
TARGET T0353
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0353 model 5 Thu Jun 29 11:50:56 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   ILE     3       8.072  28.236  -3.306  1.00  0.00
ATOM      3  CA  ILE     3       8.073  26.770  -3.393  1.00  0.00
ATOM      4  CB  ILE     3       7.667  26.288  -4.798  1.00  0.00
ATOM      5  CG1 ILE     3       6.219  26.678  -5.099  1.00  0.00
ATOM      6  CG2 ILE     3       7.790  24.775  -4.899  1.00  0.00
ATOM      7  CD1 ILE     3       5.808  26.437  -6.535  1.00  0.00
ATOM      8  O   ILE     3      10.424  26.404  -3.835  1.00  0.00
ATOM      9  C   ILE     3       9.464  26.180  -3.093  1.00  0.00
ATOM     10  N   HIS     4       9.548  25.417  -2.006  1.00  0.00
ATOM     11  CA  HIS     4      10.830  24.917  -1.487  1.00  0.00
ATOM     12  CB  HIS     4      11.105  25.487  -0.094  1.00  0.00
ATOM     13  CG  HIS     4      11.180  26.981  -0.059  1.00  0.00
ATOM     14  CD2 HIS     4      10.367  28.051   0.505  1.00  0.00
ATOM     15  ND1 HIS     4      12.203  27.690  -0.653  1.00  0.00
ATOM     16  CE1 HIS     4      11.999  29.003  -0.454  1.00  0.00
ATOM     17  NE2 HIS     4      10.899  29.228   0.240  1.00  0.00
ATOM     18  O   HIS     4      11.929  22.812  -0.953  1.00  0.00
ATOM     19  C   HIS     4      10.903  23.373  -1.351  1.00  0.00
ATOM     20  N   VAL     5       9.810  22.704  -1.696  1.00  0.00
ATOM     21  CA  VAL     5       9.718  21.257  -1.654  1.00  0.00
ATOM     22  CB  VAL     5       9.251  20.760  -0.273  1.00  0.00
ATOM     23  CG1 VAL     5      10.305  21.052   0.783  1.00  0.00
ATOM     24  CG2 VAL     5       7.960  21.454   0.133  1.00  0.00
ATOM     25  O   VAL     5       7.847  21.513  -3.137  1.00  0.00
ATOM     26  C   VAL     5       8.725  20.765  -2.692  1.00  0.00
ATOM     30  N   THR     8       6.160  13.890  -6.448  1.00  0.00
ATOM     31  CA  THR     8       5.282  13.401  -7.501  1.00  0.00
ATOM     32  CB  THR     8       5.972  13.445  -8.878  1.00  0.00
ATOM     33  CG2 THR     8       5.020  12.974  -9.967  1.00  0.00
ATOM     34  OG1 THR     8       6.380  14.788  -9.167  1.00  0.00
ATOM     35  O   THR     8       5.808  11.115  -6.929  1.00  0.00
ATOM     36  C   THR     8       4.923  11.957  -7.152  1.00  0.00
ATOM     37  N   TYR     9       3.615  11.695  -7.082  1.00  0.00
ATOM     38  CA  TYR     9       3.061  10.352  -6.907  1.00  0.00
ATOM     39  CB  TYR     9       1.854  10.389  -5.969  1.00  0.00
ATOM     40  CG  TYR     9       1.212   9.038  -5.743  1.00  0.00
ATOM     41  CD1 TYR     9       1.796   8.106  -4.895  1.00  0.00
ATOM     42  CD2 TYR     9       0.025   8.700  -6.379  1.00  0.00
ATOM     43  CE1 TYR     9       1.216   6.869  -4.682  1.00  0.00
ATOM     44  CE2 TYR     9      -0.569   7.468  -6.179  1.00  0.00
ATOM     45  CZ  TYR     9       0.039   6.551  -5.322  1.00  0.00
ATOM     46  OH  TYR     9      -0.541   5.320  -5.111  1.00  0.00
ATOM     47  O   TYR     9       1.996  10.504  -9.030  1.00  0.00
ATOM     48  C   TYR     9       2.621   9.800  -8.247  1.00  0.00
ATOM     49  N   VAL    10       2.977   8.549  -8.527  1.00  0.00
ATOM     50  CA  VAL    10       2.496   7.865  -9.722  1.00  0.00
ATOM     51  CB  VAL    10       3.645   7.566 -10.704  1.00  0.00
ATOM     52  CG1 VAL    10       3.123   6.823 -11.924  1.00  0.00
ATOM     53  CG2 VAL    10       4.297   8.859 -11.170  1.00  0.00
ATOM     54  O   VAL    10       2.386   5.803  -8.513  1.00  0.00
ATOM     55  C   VAL    10       1.844   6.545  -9.330  1.00  0.00
ATOM     56  N   LYS    11       0.673   6.268  -9.900  1.00  0.00
ATOM     57  CA  LYS    11      -0.009   4.991  -9.699  1.00  0.00
ATOM     58  CB  LYS    11      -1.511   5.142  -9.944  1.00  0.00
ATOM     59  CG  LYS    11      -2.315   3.881  -9.666  1.00  0.00
ATOM     60  CD  LYS    11      -3.801   4.116  -9.878  1.00  0.00
ATOM     61  CE  LYS    11      -4.604   2.854  -9.607  1.00  0.00
ATOM     62  NZ  LYS    11      -6.061   3.063  -9.831  1.00  0.00
ATOM     63  O   LYS    11       0.519   4.147 -11.892  1.00  0.00
ATOM     64  C   LYS    11       0.550   3.956 -10.669  1.00  0.00
ATOM     65  N   ALA    12       1.055   2.856 -10.119  1.00  0.00
ATOM     66  CA  ALA    12       1.873   1.927 -10.888  1.00  0.00
ATOM     67  CB  ALA    12       3.213   1.708 -10.203  1.00  0.00
ATOM     68  O   ALA    12       0.355   0.370 -11.932  1.00  0.00
ATOM     69  C   ALA    12       1.200   0.554 -11.042  1.00  0.00
ATOM     70  N   LYS    13       1.594  -0.400 -10.196  1.00  0.00
ATOM     71  CA  LYS    13       0.931  -1.692 -10.087  1.00  0.00
ATOM     72  CB  LYS    13       1.807  -2.681  -9.315  1.00  0.00
ATOM     73  CG  LYS    13       3.082  -3.077 -10.041  1.00  0.00
ATOM     74  CD  LYS    13       3.898  -4.066  -9.224  1.00  0.00
ATOM     75  CE  LYS    13       5.146  -4.503  -9.972  1.00  0.00
ATOM     76  NZ  LYS    13       5.931  -5.509  -9.204  1.00  0.00
ATOM     77  O   LYS    13      -0.620  -0.428  -8.780  1.00  0.00
ATOM     78  C   LYS    13      -0.394  -1.499  -9.344  1.00  0.00
ATOM     79  N   ASP    14      -1.283  -2.524  -9.348  1.00  0.00
ATOM     80  CA  ASP    14      -2.568  -2.392  -8.657  1.00  0.00
ATOM     81  CB  ASP    14      -3.290  -3.740  -8.609  1.00  0.00
ATOM     82  CG  ASP    14      -3.836  -4.155  -9.961  1.00  0.00
ATOM     83  OD1 ASP    14      -3.822  -3.322 -10.889  1.00  0.00
ATOM     84  OD2 ASP    14      -4.278  -5.317 -10.091  1.00  0.00
ATOM     85  O   ASP    14      -1.606  -2.433  -6.463  1.00  0.00
ATOM     86  C   ASP    14      -2.438  -1.910  -7.215  1.00  0.00
ATOM     87  N   GLY    15      -3.243  -0.909  -6.855  1.00  0.00
ATOM     88  CA  GLY    15      -3.341  -0.411  -5.473  1.00  0.00
ATOM     89  O   GLY    15      -1.782   0.236  -3.732  1.00  0.00
ATOM     90  C   GLY    15      -1.997   0.122  -4.949  1.00  0.00
ATOM     94  N   MET    18       3.911   5.135  -6.323  1.00  0.00
ATOM     95  CA  MET    18       5.316   5.352  -6.092  1.00  0.00
ATOM     96  CB  MET    18       6.149   4.699  -7.198  1.00  0.00
ATOM     97  CG  MET    18       7.648   4.731  -6.947  1.00  0.00
ATOM     98  SD  MET    18       8.590   3.957  -8.275  1.00  0.00
ATOM     99  CE  MET    18       8.254   2.226  -7.965  1.00  0.00
ATOM    100  O   MET    18       5.166   7.589  -6.914  1.00  0.00
ATOM    101  C   MET    18       5.644   6.836  -6.067  1.00  0.00
ATOM    102  N   HIS    19       6.467   7.242  -5.101  1.00  0.00
ATOM    103  CA  HIS    19       7.077   8.571  -5.099  1.00  0.00
ATOM    104  CB  HIS    19       7.670   8.886  -3.724  1.00  0.00
ATOM    105  CG  HIS    19       6.651   8.962  -2.629  1.00  0.00
ATOM    106  CD2 HIS    19       6.256   8.107  -1.519  1.00  0.00
ATOM    107  ND1 HIS    19       5.792  10.029  -2.485  1.00  0.00
ATOM    108  CE1 HIS    19       5.000   9.812  -1.420  1.00  0.00
ATOM    109  NE2 HIS    19       5.273   8.661  -0.835  1.00  0.00
ATOM    110  O   HIS    19       9.291   8.103  -5.925  1.00  0.00
ATOM    111  C   HIS    19       8.193   8.622  -6.145  1.00  0.00
ATOM    112  N   PHE    20       7.886   9.220  -7.296  1.00  0.00
ATOM    113  CA  PHE    20       8.795   9.207  -8.453  1.00  0.00
ATOM    114  CB  PHE    20       8.022   9.489  -9.744  1.00  0.00
ATOM    115  CG  PHE    20       7.135   8.357 -10.178  1.00  0.00
ATOM    116  CD1 PHE    20       5.780   8.373  -9.898  1.00  0.00
ATOM    117  CD2 PHE    20       7.656   7.276 -10.867  1.00  0.00
ATOM    118  CE1 PHE    20       4.965   7.332 -10.299  1.00  0.00
ATOM    119  CE2 PHE    20       6.841   6.234 -11.267  1.00  0.00
ATOM    120  CZ  PHE    20       5.500   6.259 -10.985  1.00  0.00
ATOM    121  O   PHE    20      10.930  10.160  -8.988  1.00  0.00
ATOM    122  C   PHE    20       9.882  10.252  -8.338  1.00  0.00
ATOM    123  N   ASP    21       9.610  11.257  -7.523  1.00  0.00
ATOM    124  CA  ASP    21      10.510  12.373  -7.320  1.00  0.00
ATOM    125  CB  ASP    21      10.406  13.363  -8.481  1.00  0.00
ATOM    126  CG  ASP    21      11.412  14.494  -8.375  1.00  0.00
ATOM    127  OD1 ASP    21      12.213  14.488  -7.416  1.00  0.00
ATOM    128  OD2 ASP    21      11.399  15.385  -9.250  1.00  0.00
ATOM    129  O   ASP    21       8.909  13.230  -5.779  1.00  0.00
ATOM    130  C   ASP    21      10.097  13.033  -6.029  1.00  0.00
ATOM    131  N   VAL    22      11.081  13.318  -5.190  1.00  0.00
ATOM    132  CA  VAL    22      10.883  14.110  -3.983  1.00  0.00
ATOM    133  CB  VAL    22      10.725  13.216  -2.740  1.00  0.00
ATOM    134  CG1 VAL    22      10.529  14.065  -1.494  1.00  0.00
ATOM    135  CG2 VAL    22       9.519  12.301  -2.892  1.00  0.00
ATOM    136  O   VAL    22      13.248  14.533  -3.960  1.00  0.00
ATOM    137  C   VAL    22      12.122  15.003  -3.826  1.00  0.00
ATOM    138  N   PHE    23      11.905  16.296  -3.592  1.00  0.00
ATOM    139  CA  PHE    23      13.004  17.260  -3.566  1.00  0.00
ATOM    140  CB  PHE    23      13.225  17.858  -4.958  1.00  0.00
ATOM    141  CG  PHE    23      14.337  18.868  -5.013  1.00  0.00
ATOM    142  CD1 PHE    23      15.655  18.461  -5.134  1.00  0.00
ATOM    143  CD2 PHE    23      14.064  20.223  -4.946  1.00  0.00
ATOM    144  CE1 PHE    23      16.677  19.390  -5.186  1.00  0.00
ATOM    145  CE2 PHE    23      15.087  21.150  -4.997  1.00  0.00
ATOM    146  CZ  PHE    23      16.388  20.739  -5.117  1.00  0.00
ATOM    147  O   PHE    23      11.565  18.832  -2.507  1.00  0.00
ATOM    148  C   PHE    23      12.709  18.386  -2.610  1.00  0.00
ATOM    149  N   THR    24      13.759  18.826  -1.920  1.00  0.00
ATOM    150  CA  THR    24      13.730  19.954  -1.006  1.00  0.00
ATOM    151  CB  THR    24      13.982  19.509   0.447  1.00  0.00
ATOM    152  CG2 THR    24      13.934  20.705   1.386  1.00  0.00
ATOM    153  OG1 THR    24      12.975  18.569   0.842  1.00  0.00
ATOM    154  O   THR    24      15.897  20.468  -1.917  1.00  0.00
ATOM    155  C   THR    24      14.837  20.914  -1.459  1.00  0.00
ATOM    156  N   ASP    25      14.578  22.218  -1.367  1.00  0.00
ATOM    157  CA  ASP    25      15.565  23.234  -1.711  1.00  0.00
ATOM    158  CB  ASP    25      15.041  24.629  -1.360  1.00  0.00
ATOM    159  CG  ASP    25      16.008  25.729  -1.752  1.00  0.00
ATOM    160  OD1 ASP    25      16.232  25.918  -2.966  1.00  0.00
ATOM    161  OD2 ASP    25      16.541  26.403  -0.845  1.00  0.00
ATOM    162  O   ASP    25      16.787  22.655   0.259  1.00  0.00
ATOM    163  C   ASP    25      16.843  22.973  -0.932  1.00  0.00
ATOM    164  N   VAL    26      17.984  23.091  -1.621  1.00  0.00
ATOM    165  CA  VAL    26      19.301  22.754  -1.061  1.00  0.00
ATOM    166  CB  VAL    26      20.440  23.166  -2.012  1.00  0.00
ATOM    167  CG1 VAL    26      21.789  23.004  -1.330  1.00  0.00
ATOM    168  CG2 VAL    26      20.428  22.299  -3.263  1.00  0.00
ATOM    169  O   VAL    26      20.014  22.792   1.220  1.00  0.00
ATOM    170  C   VAL    26      19.582  23.442   0.273  1.00  0.00
ATOM    171  N   ARG    27      19.322  24.747   0.342  1.00  0.00
ATOM    172  CA  ARG    27      19.618  25.542   1.534  1.00  0.00
ATOM    173  CB  ARG    27      19.461  27.034   1.235  1.00  0.00
ATOM    174  CG  ARG    27      20.522  27.595   0.301  1.00  0.00
ATOM    175  CD  ARG    27      20.258  29.058  -0.019  1.00  0.00
ATOM    176  NE  ARG    27      19.049  29.233  -0.821  1.00  0.00
ATOM    177  CZ  ARG    27      18.614  30.406  -1.270  1.00  0.00
ATOM    178  NH1 ARG    27      17.504  30.469  -1.993  1.00  0.00
ATOM    179  NH2 ARG    27      19.291  31.514  -0.997  1.00  0.00
ATOM    180  O   ARG    27      18.986  25.652   3.862  1.00  0.00
ATOM    181  C   ARG    27      18.704  25.234   2.732  1.00  0.00
ATOM    182  N   ASP    28      17.618  24.501   2.481  1.00  0.00
ATOM    183  CA  ASP    28      16.638  24.195   3.524  1.00  0.00
ATOM    184  CB  ASP    28      15.222  24.505   3.035  1.00  0.00
ATOM    185  CG  ASP    28      14.187  24.382   4.136  1.00  0.00
ATOM    186  OD1 ASP    28      14.582  24.288   5.317  1.00  0.00
ATOM    187  OD2 ASP    28      12.978  24.382   3.818  1.00  0.00
ATOM    188  O   ASP    28      15.829  22.344   4.802  1.00  0.00
ATOM    189  C   ASP    28      16.642  22.731   3.962  1.00  0.00
ATOM    190  N   ASP    29      11.588  17.223   4.326  1.00  0.00
ATOM    191  CA  ASP    29      11.509  15.902   3.701  1.00  0.00
ATOM    192  CB  ASP    29      12.884  15.231   3.690  1.00  0.00
ATOM    193  CG  ASP    29      12.891  13.928   2.916  1.00  0.00
ATOM    194  OD1 ASP    29      11.841  13.573   2.341  1.00  0.00
ATOM    195  OD2 ASP    29      13.947  13.262   2.884  1.00  0.00
ATOM    196  O   ASP    29       9.602  14.476   3.886  1.00  0.00
ATOM    197  C   ASP    29      10.548  15.012   4.461  1.00  0.00
ATOM    198  N   LYS    30      10.804  14.868   5.763  1.00  0.00
ATOM    199  CA  LYS    30       9.862  14.283   6.726  1.00  0.00
ATOM    200  CB  LYS    30      10.183  14.758   8.145  1.00  0.00
ATOM    201  CG  LYS    30       9.302  14.140   9.220  1.00  0.00
ATOM    202  CD  LYS    30       9.708  14.615  10.606  1.00  0.00
ATOM    203  CE  LYS    30       8.807  14.023  11.677  1.00  0.00
ATOM    204  NZ  LYS    30       9.199  14.472  13.042  1.00  0.00
ATOM    205  O   LYS    30       7.553  13.786   6.299  1.00  0.00
ATOM    206  C   LYS    30       8.409  14.664   6.438  1.00  0.00
ATOM    207  N   LYS    31       8.146  15.971   6.350  1.00  0.00
ATOM    208  CA  LYS    31       6.798  16.507   6.126  1.00  0.00
ATOM    209  CB  LYS    31       6.818  18.037   6.163  1.00  0.00
ATOM    210  CG  LYS    31       5.452  18.679   5.980  1.00  0.00
ATOM    211  CD  LYS    31       5.534  20.193   6.100  1.00  0.00
ATOM    212  CE  LYS    31       4.177  20.839   5.868  1.00  0.00
ATOM    213  NZ  LYS    31       4.246  22.323   5.956  1.00  0.00
ATOM    214  O   LYS    31       5.010  15.729   4.747  1.00  0.00
ATOM    215  C   LYS    31       6.175  16.119   4.787  1.00  0.00
ATOM    216  N   ALA    32       6.944  16.227   3.702  1.00  0.00
ATOM    217  CA  ALA    32       6.476  15.839   2.368  1.00  0.00
ATOM    218  CB  ALA    32       7.548  16.119   1.326  1.00  0.00
ATOM    219  O   ALA    32       5.195  13.943   1.615  1.00  0.00
ATOM    220  C   ALA    32       6.137  14.354   2.304  1.00  0.00
ATOM    221  N   ILE    33       6.918  13.564   3.037  1.00  0.00
ATOM    222  CA  ILE    33       6.800  12.116   3.061  1.00  0.00
ATOM    223  CB  ILE    33       8.003  11.464   3.769  1.00  0.00
ATOM    224  CG1 ILE    33       9.279  11.671   2.952  1.00  0.00
ATOM    225  CG2 ILE    33       7.774   9.969   3.936  1.00  0.00
ATOM    226  CD1 ILE    33      10.544  11.298   3.691  1.00  0.00
ATOM    227  O   ILE    33       4.743  10.914   3.274  1.00  0.00
ATOM    228  C   ILE    33       5.533  11.699   3.804  1.00  0.00
ATOM    229  N   GLU    34       5.346  12.220   5.021  1.00  0.00
ATOM    230  CA  GLU    34       4.088  12.079   5.762  1.00  0.00
ATOM    231  CB  GLU    34       4.055  13.040   6.952  1.00  0.00
ATOM    232  CG  GLU    34       2.794  12.942   7.795  1.00  0.00
ATOM    233  CD  GLU    34       2.815  13.879   8.987  1.00  0.00
ATOM    234  OE1 GLU    34       3.832  14.580   9.173  1.00  0.00
ATOM    235  OE2 GLU    34       1.816  13.912   9.735  1.00  0.00
ATOM    236  O   GLU    34       1.922  11.622   4.819  1.00  0.00
ATOM    237  C   GLU    34       2.888  12.391   4.856  1.00  0.00
ATOM    238  N   PHE    35       2.975  13.500   4.114  1.00  0.00
ATOM    239  CA  PHE    35       1.900  13.952   3.216  1.00  0.00
ATOM    240  CB  PHE    35       2.235  15.326   2.629  1.00  0.00
ATOM    241  CG  PHE    35       1.175  15.866   1.712  1.00  0.00
ATOM    242  CD1 PHE    35       0.015  16.423   2.221  1.00  0.00
ATOM    243  CD2 PHE    35       1.339  15.819   0.338  1.00  0.00
ATOM    244  CE1 PHE    35      -0.959  16.921   1.378  1.00  0.00
ATOM    245  CE2 PHE    35       0.365  16.318  -0.506  1.00  0.00
ATOM    246  CZ  PHE    35      -0.780  16.867   0.009  1.00  0.00
ATOM    247  O   PHE    35       0.508  12.765   1.663  1.00  0.00
ATOM    248  C   PHE    35       1.662  13.007   2.036  1.00  0.00
ATOM    249  N   ALA    36       2.742  12.488   1.452  1.00  0.00
ATOM    250  CA  ALA    36       2.643  11.471   0.403  1.00  0.00
ATOM    251  CB  ALA    36       4.029  11.039  -0.050  1.00  0.00
ATOM    252  O   ALA    36       1.005   9.718   0.184  1.00  0.00
ATOM    253  C   ALA    36       1.897  10.220   0.885  1.00  0.00
ATOM    254  N   LYS    37       2.262   9.735   2.080  1.00  0.00
ATOM    255  CA  LYS    37       1.627   8.569   2.710  1.00  0.00
ATOM    256  CB  LYS    37       2.234   8.308   4.091  1.00  0.00
ATOM    257  CG  LYS    37       1.662   7.092   4.800  1.00  0.00
ATOM    258  CD  LYS    37       2.358   6.851   6.130  1.00  0.00
ATOM    259  CE  LYS    37       1.753   5.664   6.861  1.00  0.00
ATOM    260  NZ  LYS    37       2.409   5.431   8.177  1.00  0.00
ATOM    261  O   LYS    37      -0.694   7.951   2.489  1.00  0.00
ATOM    262  C   LYS    37       0.120   8.801   2.881  1.00  0.00
ATOM    263  N   GLN    38      -0.238   9.956   3.453  1.00  0.00
ATOM    264  CA  GLN    38      -1.638  10.323   3.678  1.00  0.00
ATOM    265  CB  GLN    38      -1.730  11.652   4.430  1.00  0.00
ATOM    266  CG  GLN    38      -1.290  11.576   5.882  1.00  0.00
ATOM    267  CD  GLN    38      -1.286  12.931   6.563  1.00  0.00
ATOM    268  OE1 GLN    38      -1.527  13.956   5.926  1.00  0.00
ATOM    269  NE2 GLN    38      -1.010  12.939   7.862  1.00  0.00
ATOM    270  O   GLN    38      -3.577  10.072   2.299  1.00  0.00
ATOM    271  C   GLN    38      -2.426  10.484   2.382  1.00  0.00
ATOM    272  N   TRP    39      -1.793  11.073   1.377  1.00  0.00
ATOM    273  CA  TRP    39      -2.416  11.237   0.071  1.00  0.00
ATOM    274  CB  TRP    39      -1.503  12.033  -0.863  1.00  0.00
ATOM    275  CG  TRP    39      -2.076  12.237  -2.233  1.00  0.00
ATOM    276  CD1 TRP    39      -1.674  11.634  -3.388  1.00  0.00
ATOM    277  CD2 TRP    39      -3.158  13.106  -2.588  1.00  0.00
ATOM    278  CE2 TRP    39      -3.357  12.977  -3.978  1.00  0.00
ATOM    279  CE3 TRP    39      -3.980  13.980  -1.870  1.00  0.00
ATOM    280  NE1 TRP    39      -2.436  12.072  -4.443  1.00  0.00
ATOM    281  CZ2 TRP    39      -4.340  13.689  -4.661  1.00  0.00
ATOM    282  CZ3 TRP    39      -4.955  14.684  -2.552  1.00  0.00
ATOM    283  CH2 TRP    39      -5.130  14.537  -3.932  1.00  0.00
ATOM    284  O   TRP    39      -3.745   9.676  -1.175  1.00  0.00
ATOM    285  C   TRP    39      -2.693   9.880  -0.572  1.00  0.00
ATOM    286  N   LEU    40      -1.750   8.958  -0.407  1.00  0.00
ATOM    287  CA  LEU    40      -1.828   7.620  -0.971  1.00  0.00
ATOM    288  CB  LEU    40      -0.499   6.884  -0.788  1.00  0.00
ATOM    289  CG  LEU    40       0.684   7.405  -1.607  1.00  0.00
ATOM    290  CD1 LEU    40       1.972   6.706  -1.199  1.00  0.00
ATOM    291  CD2 LEU    40       0.459   7.161  -3.092  1.00  0.00
ATOM    292  O   LEU    40      -3.590   5.985  -1.035  1.00  0.00
ATOM    293  C   LEU    40      -2.907   6.742  -0.334  1.00  0.00
ATOM    294  N   SER    41      -3.045   6.832   0.989  1.00  0.00
ATOM    295  CA  SER    41      -4.162   6.198   1.699  1.00  0.00
ATOM    296  CB  SER    41      -4.076   6.492   3.198  1.00  0.00
ATOM    297  OG  SER    41      -2.942   5.869   3.777  1.00  0.00
ATOM    298  O   SER    41      -6.368   5.987   0.789  1.00  0.00
ATOM    299  C   SER    41      -5.472   6.747   1.158  1.00  0.00
ATOM    300  N   SER    42      -5.558   8.076   1.103  1.00  0.00
ATOM    301  CA  SER    42      -6.715   8.792   0.568  1.00  0.00
ATOM    302  CB  SER    42      -6.380  10.271   0.356  1.00  0.00
ATOM    303  OG  SER    42      -6.124  10.917   1.590  1.00  0.00
ATOM    304  O   SER    42      -8.421   8.195  -0.989  1.00  0.00
ATOM    305  C   SER    42      -7.212   8.270  -0.767  1.00  0.00
ATOM    306  N   ILE    43      -6.281   7.901  -1.648  1.00  0.00
ATOM    307  CA  ILE    43      -6.628   7.363  -2.970  1.00  0.00
ATOM    308  CB  ILE    43      -5.456   7.496  -3.959  1.00  0.00
ATOM    309  CG1 ILE    43      -4.267   6.651  -3.495  1.00  0.00
ATOM    310  CG2 ILE    43      -5.007   8.945  -4.061  1.00  0.00
ATOM    311  CD1 ILE    43      -3.127   6.603  -4.489  1.00  0.00
ATOM    312  O   ILE    43      -7.333   5.311  -4.014  1.00  0.00
ATOM    313  C   ILE    43      -7.008   5.876  -2.970  1.00  0.00
ATOM    314  N   GLY    44      -6.975   5.252  -1.795  1.00  0.00
ATOM    315  CA  GLY    44      -7.353   3.851  -1.656  1.00  0.00
ATOM    316  O   GLY    44      -6.484   1.663  -2.081  1.00  0.00
ATOM    317  C   GLY    44      -6.232   2.863  -1.928  1.00  0.00
ATOM    318  N   GLU    45      -4.994   3.355  -1.990  1.00  0.00
ATOM    319  CA  GLU    45      -3.824   2.487  -2.179  1.00  0.00
ATOM    320  CB  GLU    45      -2.595   3.319  -2.552  1.00  0.00
ATOM    321  CG  GLU    45      -2.673   3.956  -3.929  1.00  0.00
ATOM    322  CD  GLU    45      -1.438   4.769  -4.265  1.00  0.00
ATOM    323  OE1 GLU    45      -0.538   4.867  -3.405  1.00  0.00
ATOM    324  OE2 GLU    45      -1.369   5.310  -5.389  1.00  0.00
ATOM    325  O   GLU    45      -3.724   2.151   0.219  1.00  0.00
ATOM    326  C   GLU    45      -3.478   1.695  -0.913  1.00  0.00
ATOM    327  N   GLU    46      -2.907   0.511  -1.118  1.00  0.00
ATOM    328  CA  GLU    46      -2.425  -0.316  -0.018  1.00  0.00
ATOM    329  CB  GLU    46      -2.955  -1.746  -0.151  1.00  0.00
ATOM    330  CG  GLU    46      -4.451  -1.877   0.083  1.00  0.00
ATOM    331  CD  GLU    46      -4.981  -3.247  -0.291  1.00  0.00
ATOM    332  OE1 GLU    46      -4.185  -4.080  -0.775  1.00  0.00
ATOM    333  OE2 GLU    46      -6.192  -3.487  -0.103  1.00  0.00
ATOM    334  O   GLU    46      -0.330  -0.911   1.009  1.00  0.00
ATOM    335  C   GLU    46      -0.888  -0.402   0.035  1.00  0.00
ATOM    339  N   LYS    62      21.994   4.078  -4.436  1.00  0.00
ATOM    340  CA  LYS    62      22.780   3.385  -3.419  1.00  0.00
ATOM    341  CB  LYS    62      23.742   2.389  -4.070  1.00  0.00
ATOM    342  CG  LYS    62      23.059   1.180  -4.688  1.00  0.00
ATOM    343  CD  LYS    62      24.071   0.239  -5.323  1.00  0.00
ATOM    344  CE  LYS    62      23.388  -0.969  -5.943  1.00  0.00
ATOM    345  NZ  LYS    62      24.364  -1.883  -6.596  1.00  0.00
ATOM    346  O   LYS    62      23.893   4.111  -1.395  1.00  0.00
ATOM    347  C   LYS    62      23.616   4.350  -2.578  1.00  0.00
ATOM    348  N   ALA    63      23.998   5.451  -3.214  1.00  0.00
ATOM    349  CA  ALA    63      24.780   6.496  -2.596  1.00  0.00
ATOM    350  CB  ALA    63      25.460   7.348  -3.658  1.00  0.00
ATOM    351  O   ALA    63      24.507   8.199  -0.947  1.00  0.00
ATOM    352  C   ALA    63      23.944   7.443  -1.728  1.00  0.00
ATOM    353  N   PRO    64      22.614   7.417  -1.868  1.00  0.00
ATOM    354  CA  PRO    64      21.743   8.368  -1.162  1.00  0.00
ATOM    355  CB  PRO    64      20.478   8.418  -2.020  1.00  0.00
ATOM    356  CG  PRO    64      20.340   7.037  -2.565  1.00  0.00
ATOM    357  CD  PRO    64      21.736   6.567  -2.869  1.00  0.00
ATOM    358  O   PRO    64      20.275   7.658   0.605  1.00  0.00
ATOM    359  C   PRO    64      21.437   7.894   0.245  1.00  0.00
ATOM    360  N   ASP    65      22.487   7.782   1.051  1.00  0.00
ATOM    361  CA  ASP    65      22.397   7.135   2.359  1.00  0.00
ATOM    362  CB  ASP    65      23.788   6.993   2.982  1.00  0.00
ATOM    363  CG  ASP    65      24.624   5.924   2.306  1.00  0.00
ATOM    364  OD1 ASP    65      24.057   5.131   1.527  1.00  0.00
ATOM    365  OD2 ASP    65      25.847   5.882   2.555  1.00  0.00
ATOM    366  O   ASP    65      20.836   7.289   4.180  1.00  0.00
ATOM    367  C   ASP    65      21.536   7.902   3.368  1.00  0.00
ATOM    368  N   GLU    66      21.585   9.229   3.306  1.00  0.00
ATOM    369  CA  GLU    66      20.741  10.068   4.152  1.00  0.00
ATOM    370  CB  GLU    66      21.093  11.545   3.963  1.00  0.00
ATOM    371  CG  GLU    66      22.448  11.938   4.526  1.00  0.00
ATOM    372  CD  GLU    66      22.815  13.375   4.212  1.00  0.00
ATOM    373  OE1 GLU    66      22.044  14.043   3.492  1.00  0.00
ATOM    374  OE2 GLU    66      23.876  13.835   4.687  1.00  0.00
ATOM    375  O   GLU    66      18.402   9.938   4.739  1.00  0.00
ATOM    376  C   GLU    66      19.241   9.904   3.832  1.00  0.00
ATOM    377  N   VAL    67      18.916   9.729   2.554  1.00  0.00
ATOM    378  CA  VAL    67      17.545   9.396   2.151  1.00  0.00
ATOM    379  CB  VAL    67      17.376   9.460   0.621  1.00  0.00
ATOM    380  CG1 VAL    67      16.010   8.931   0.214  1.00  0.00
ATOM    381  CG2 VAL    67      17.501  10.894   0.131  1.00  0.00
ATOM    382  O   VAL    67      16.015   7.784   3.044  1.00  0.00
ATOM    383  C   VAL    67      17.142   7.991   2.585  1.00  0.00
ATOM    384  N   ILE    68      18.062   7.034   2.438  1.00  0.00
ATOM    385  CA  ILE    68      17.854   5.671   2.951  1.00  0.00
ATOM    386  CB  ILE    68      19.128   4.816   2.813  1.00  0.00
ATOM    387  CG1 ILE    68      19.433   4.547   1.338  1.00  0.00
ATOM    388  CG2 ILE    68      18.952   3.480   3.519  1.00  0.00
ATOM    389  CD1 ILE    68      20.804   3.953   1.096  1.00  0.00
ATOM    390  O   ILE    68      16.536   4.916   4.810  1.00  0.00
ATOM    391  C   ILE    68      17.465   5.632   4.439  1.00  0.00
ATOM    392  N   GLU    69      18.175   6.391   5.277  1.00  0.00
ATOM    393  CA  GLU    69      17.822   6.516   6.696  1.00  0.00
ATOM    394  CB  GLU    69      18.858   7.368   7.433  1.00  0.00
ATOM    395  CG  GLU    69      18.594   7.513   8.923  1.00  0.00
ATOM    396  CD  GLU    69      19.659   8.334   9.625  1.00  0.00
ATOM    397  OE1 GLU    69      20.608   8.779   8.946  1.00  0.00
ATOM    398  OE2 GLU    69      19.542   8.533  10.852  1.00  0.00
ATOM    399  O   GLU    69      15.633   6.676   7.666  1.00  0.00
ATOM    400  C   GLU    69      16.453   7.177   6.890  1.00  0.00
ATOM    401  N   ALA    70      16.219   8.290   6.186  1.00  0.00
ATOM    402  CA  ALA    70      14.949   9.020   6.258  1.00  0.00
ATOM    403  CB  ALA    70      14.951  10.187   5.282  1.00  0.00
ATOM    404  O   ALA    70      12.798   8.037   6.699  1.00  0.00
ATOM    405  C   ALA    70      13.738   8.140   5.914  1.00  0.00
ATOM    406  N   ILE    71      13.772   7.506   4.744  1.00  0.00
ATOM    407  CA  ILE    71      12.686   6.636   4.299  1.00  0.00
ATOM    408  CB  ILE    71      13.031   5.935   2.972  1.00  0.00
ATOM    409  CG1 ILE    71      13.107   6.954   1.834  1.00  0.00
ATOM    410  CG2 ILE    71      11.972   4.901   2.624  1.00  0.00
ATOM    411  CD1 ILE    71      13.700   6.401   0.557  1.00  0.00
ATOM    412  O   ILE    71      11.196   5.305   5.612  1.00  0.00
ATOM    413  C   ILE    71      12.365   5.543   5.303  1.00  0.00
ATOM    414  N   LYS    72      13.405   4.894   5.831  1.00  0.00
ATOM    415  CA  LYS    72      13.219   3.808   6.790  1.00  0.00
ATOM    416  CB  LYS    72      14.552   3.114   7.079  1.00  0.00
ATOM    417  CG  LYS    72      14.441   1.928   8.022  1.00  0.00
ATOM    418  CD  LYS    72      15.782   1.231   8.192  1.00  0.00
ATOM    419  CE  LYS    72      15.678   0.060   9.156  1.00  0.00
ATOM    420  NZ  LYS    72      16.989  -0.619   9.347  1.00  0.00
ATOM    421  O   LYS    72      11.805   3.628   8.734  1.00  0.00
ATOM    422  C   LYS    72      12.656   4.294   8.134  1.00  0.00
ATOM    423  N   GLN    73      13.136   5.453   8.595  1.00  0.00
ATOM    424  CA  GLN    73      12.596   6.109   9.794  1.00  0.00
ATOM    425  CB  GLN    73      13.314   7.437  10.046  1.00  0.00
ATOM    426  CG  GLN    73      14.753   7.286  10.512  1.00  0.00
ATOM    427  CD  GLN    73      15.456   8.619  10.676  1.00  0.00
ATOM    428  OE1 GLN    73      14.880   9.673  10.404  1.00  0.00
ATOM    429  NE2 GLN    73      16.705   8.578  11.124  1.00  0.00
ATOM    430  O   GLN    73      10.354   6.336  10.569  1.00  0.00
ATOM    431  C   GLN    73      11.112   6.387   9.617  1.00  0.00
ATOM    432  N   ASN    74      10.715   6.677   8.380  1.00  0.00
ATOM    433  CA  ASN    74       9.327   6.971   8.051  1.00  0.00
ATOM    434  CB  ASN    74       9.250   7.899   6.837  1.00  0.00
ATOM    435  CG  ASN    74       9.816   9.277   7.119  1.00  0.00
ATOM    436  ND2 ASN    74      10.848   9.655   6.375  1.00  0.00
ATOM    437  OD1 ASN    74       9.330   9.990   7.997  1.00  0.00
ATOM    438  O   ASN    74       7.324   5.855   7.343  1.00  0.00
ATOM    439  C   ASN    74       8.482   5.726   7.705  1.00  0.00
ATOM    440  N   GLY    75       9.053   4.531   7.816  1.00  0.00
ATOM    441  CA  GLY    75       8.278   3.298   7.651  1.00  0.00
ATOM    442  O   GLY    75       7.994   1.368   6.280  1.00  0.00
ATOM    443  C   GLY    75       8.530   2.462   6.405  1.00  0.00
ATOM    444  N   TYR    76       9.334   2.975   5.478  1.00  0.00
ATOM    445  CA  TYR    76       9.708   2.240   4.269  1.00  0.00
ATOM    446  CB  TYR    76      10.346   3.183   3.247  1.00  0.00
ATOM    447  CG  TYR    76      10.789   2.497   1.974  1.00  0.00
ATOM    448  CD1 TYR    76       9.861   2.115   1.012  1.00  0.00
ATOM    449  CD2 TYR    76      12.130   2.234   1.737  1.00  0.00
ATOM    450  CE1 TYR    76      10.255   1.488  -0.154  1.00  0.00
ATOM    451  CE2 TYR    76      12.544   1.607   0.577  1.00  0.00
ATOM    452  CZ  TYR    76      11.592   1.234  -0.372  1.00  0.00
ATOM    453  OH  TYR    76      11.988   0.610  -1.531  1.00  0.00
ATOM    454  O   TYR    76      11.634   1.272   5.355  1.00  0.00
ATOM    455  C   TYR    76      10.715   1.119   4.548  1.00  0.00
ATOM    456  N   PHE    77      10.528  -0.014   3.887  1.00  0.00
ATOM    457  CA  PHE    77      11.444  -1.122   4.020  1.00  0.00
ATOM    458  CB  PHE    77      10.700  -2.381   4.468  1.00  0.00
ATOM    459  CG  PHE    77      10.090  -2.271   5.836  1.00  0.00
ATOM    460  CD1 PHE    77       8.786  -1.832   5.994  1.00  0.00
ATOM    461  CD2 PHE    77      10.817  -2.604   6.965  1.00  0.00
ATOM    462  CE1 PHE    77       8.224  -1.730   7.253  1.00  0.00
ATOM    463  CE2 PHE    77      10.256  -2.501   8.223  1.00  0.00
ATOM    464  CZ  PHE    77       8.966  -2.068   8.370  1.00  0.00
ATOM    465  O   PHE    77      11.476  -1.461   1.638  1.00  0.00
ATOM    466  C   PHE    77      12.132  -1.418   2.683  1.00  0.00
ATOM    467  N   ILE    78      13.448  -1.614   2.724  1.00  0.00
ATOM    468  CA  ILE    78      14.227  -1.927   1.526  1.00  0.00
ATOM    469  CB  ILE    78      15.739  -1.788   1.783  1.00  0.00
ATOM    470  CG1 ILE    78      16.092  -0.339   2.121  1.00  0.00
ATOM    471  CG2 ILE    78      16.530  -2.203   0.552  1.00  0.00
ATOM    472  CD1 ILE    78      17.509  -0.155   2.617  1.00  0.00
ATOM    473  O   ILE    78      13.997  -4.265   1.944  1.00  0.00
ATOM    474  C   ILE    78      13.922  -3.362   1.118  1.00  0.00
ATOM    475  N   TYR    79      13.579  -3.571  -0.153  1.00  0.00
ATOM    476  CA  TYR    79      13.184  -4.906  -0.629  1.00  0.00
ATOM    477  CB  TYR    79      11.687  -4.942  -0.941  1.00  0.00
ATOM    478  CG  TYR    79      11.205  -6.268  -1.486  1.00  0.00
ATOM    479  CD1 TYR    79      10.999  -7.350  -0.641  1.00  0.00
ATOM    480  CD2 TYR    79      10.961  -6.433  -2.843  1.00  0.00
ATOM    481  CE1 TYR    79      10.560  -8.566  -1.129  1.00  0.00
ATOM    482  CE2 TYR    79      10.521  -7.641  -3.350  1.00  0.00
ATOM    483  CZ  TYR    79      10.322  -8.712  -2.479  1.00  0.00
ATOM    484  OH  TYR    79       9.884  -9.921  -2.968  1.00  0.00
ATOM    485  O   TYR    79      13.875  -6.551  -2.204  1.00  0.00
ATOM    486  C   TYR    79      13.893  -5.375  -1.902  1.00  0.00
ATOM    487  N   LYS    80      14.540  -4.467  -2.627  1.00  0.00
ATOM    488  CA  LYS    80      15.052  -4.783  -3.959  1.00  0.00
ATOM    489  CB  LYS    80      13.907  -4.858  -4.969  1.00  0.00
ATOM    490  CG  LYS    80      13.199  -3.533  -5.205  1.00  0.00
ATOM    491  CD  LYS    80      12.090  -3.675  -6.235  1.00  0.00
ATOM    492  CE  LYS    80      11.327  -2.371  -6.407  1.00  0.00
ATOM    493  NZ  LYS    80      10.187  -2.516  -7.354  1.00  0.00
ATOM    494  O   LYS    80      16.075  -2.606  -4.018  1.00  0.00
ATOM    495  C   LYS    80      16.048  -3.741  -4.484  1.00  0.00
ATOM    496  N   MET    81      16.837  -4.151  -5.475  1.00  0.00
ATOM    497  CA  MET    81      17.858  -3.322  -6.121  1.00  0.00
ATOM    498  CB  MET    81      19.259  -3.788  -5.722  1.00  0.00
ATOM    499  CG  MET    81      19.580  -3.599  -4.248  1.00  0.00
ATOM    500  SD  MET    81      21.189  -4.273  -3.795  1.00  0.00
ATOM    501  CE  MET    81      20.844  -6.030  -3.834  1.00  0.00
ATOM    502  O   MET    81      17.791  -4.532  -8.195  1.00  0.00
ATOM    503  C   MET    81      17.713  -3.427  -7.650  1.00  0.00
ATOM    504  N   GLU    82      17.473  -2.304  -8.330  1.00  0.00
ATOM    505  CA  GLU    82      17.624  -2.248  -9.788  1.00  0.00
ATOM    506  CB  GLU    82      16.697  -1.187 -10.384  1.00  0.00
ATOM    507  CG  GLU    82      15.218  -1.467 -10.172  1.00  0.00
ATOM    508  CD  GLU    82      14.338  -0.306 -10.595  1.00  0.00
ATOM    509  OE1 GLU    82      14.890   0.736 -11.010  1.00  0.00
ATOM    510  OE2 GLU    82      13.100  -0.438 -10.512  1.00  0.00
ATOM    511  O   GLU    82      19.480  -0.738  -9.946  1.00  0.00
ATOM    512  C   GLU    82      19.076  -1.895 -10.096  1.00  0.00
TER
END



